ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01842:01804

Extra

PDB:
ATOM 1 O3' U A1841 109.193 125.938 88.688 1.00 39.24 O
ATOM 2 P G A1842 108.315 127.092 89.379 1.00 39.82 P
ATOM 3 OP1 G A1842 108.326 126.847 90.840 1.00 40.80 O
ATOM 4 OP2 G A1842 107.020 127.206 88.665 1.00 40.04 O
ATOM 5 O5' G A1842 109.108 128.439 89.089 1.00 40.89 O
ATOM 6 C5' G A1842 110.475 128.614 89.499 1.00 39.87 C
ATOM 7 C4' G A1842 111.007 129.915 88.945 1.00 40.27 C
ATOM 8 O4' G A1842 110.733 129.945 87.515 1.00 40.34 O
ATOM 9 C3' G A1842 110.360 131.174 89.511 1.00 39.77 C
ATOM 10 O3' G A1842 111.280 132.256 89.404 1.00 42.07 O
ATOM 11 C2' G A1842 109.226 131.419 88.530 1.00 38.79 C
ATOM 12 O2' G A1842 108.794 132.762 88.506 1.00 38.68 O
ATOM 13 C1' G A1842 109.902 131.044 87.216 1.00 39.28 C
ATOM 14 N9 G A1842 108.967 130.656 86.169 1.00 39.53 N
ATOM 15 C8 G A1842 108.080 129.608 86.191 1.00 40.83 C
ATOM 16 N7 G A1842 107.322 129.557 85.130 1.00 42.09 N
ATOM 17 C5 G A1842 107.740 130.631 84.356 1.00 40.87 C
ATOM 18 C6 G A1842 107.262 131.108 83.104 1.00 40.20 C
ATOM 19 O6 G A1842 106.333 130.675 82.416 1.00 36.92 O
ATOM 20 N1 G A1842 107.982 132.218 82.674 1.00 39.76 N
ATOM 21 C2 G A1842 109.019 132.801 83.358 1.00 39.09 C
ATOM 22 N2 G A1842 109.594 133.850 82.763 1.00 38.82 N
ATOM 23 N3 G A1842 109.458 132.382 84.534 1.00 38.49 N
ATOM 24 C4 G A1842 108.777 131.302 84.971 1.00 40.10 C
ATOM 25 P A A1843 112.248 132.616 90.630 1.00 43.11 P
ATOM 26 OP1 A A1843 113.380 131.666 90.563 1.00 44.29 O
ATOM 27 OP2 A A1843 111.463 132.736 91.886 1.00 43.50 O
ATOM 28 O5' A A1843 112.798 134.057 90.255 1.00 41.46 O
TER

ATOM 1 O3' A B1803 104.878 135.218 79.878 1.00 31.46 O
ATOM 2 P U B1804 106.374 134.666 79.930 1.00 32.25 P
ATOM 3 OP1 U B1804 106.886 134.561 78.540 1.00 33.65 O
ATOM 4 OP2 U B1804 106.398 133.477 80.811 1.00 32.42 O
ATOM 5 O5' U B1804 107.160 135.827 80.677 1.00 35.03 O
ATOM 6 C5' U B1804 107.147 137.171 80.167 1.00 35.50 C
ATOM 7 C4' U B1804 107.778 138.103 81.166 1.00 35.68 C
ATOM 8 O4' U B1804 106.953 138.156 82.353 1.00 35.23 O
ATOM 9 C3' U B1804 109.152 137.680 81.656 1.00 35.58 C
ATOM 10 O3' U B1804 110.154 138.182 80.769 1.00 36.12 O
ATOM 11 C2' U B1804 109.230 138.360 83.020 1.00 36.32 C
ATOM 12 O2' U B1804 109.562 139.727 82.895 1.00 36.89 O
ATOM 13 C1' U B1804 107.775 138.281 83.495 1.00 35.10 C
ATOM 14 N1 U B1804 107.419 137.208 84.437 1.00 34.21 N
ATOM 15 C2 U B1804 107.436 137.501 85.785 1.00 34.47 C
ATOM 16 O2 U B1804 107.819 138.560 86.230 1.00 37.62 O
ATOM 17 N3 U B1804 106.991 136.501 86.599 1.00 34.07 N
ATOM 18 C4 U B1804 106.561 135.255 86.221 1.00 34.79 C
ATOM 19 O4 U B1804 106.106 134.492 87.072 1.00 36.02 O
ATOM 20 C5 U B1804 106.623 135.004 84.819 1.00 33.87 C
ATOM 21 C6 U B1804 107.041 135.965 83.995 1.00 34.50 C
ATOM 22 P A B1805 111.005 137.172 79.845 1.00 37.90 P
ATOM 23 OP1 A B1805 110.756 137.511 78.420 1.00 35.50 O
ATOM 24 OP2 A B1805 110.803 135.785 80.312 1.00 38.73 O
ATOM 25 O5' A B1805 112.513 137.563 80.155 1.00 37.45 O
TER

Atoms:
OP1: (108.326,126.847,90.840)
OP2: (107.020,127.206,88.665)
C3': (110.360,131.174,89.511)
C1': (109.902,131.044,87.216)
C5': (110.475,128.614,89.499)
O6: (106.333,130.675,82.416)
O4': (110.733,129.945,87.515)
C8: (108.080,129.608,86.191)
C2: (109.019,132.801,83.358)
C6: (107.262,131.108,83.104)
C5: (107.740,130.631,84.356)
C4: (108.777,131.302,84.971)
P: (108.315,127.092,89.379)
C4': (111.007,129.915,88.945)
C2': (109.226,131.419,88.530)
O2': (108.794,132.762,88.506)
N1: (107.982,132.218,82.674)
N2: (109.594,133.850,82.763)
N3: (109.458,132.382,84.534)
N7: (107.322,129.557,85.130)
N9: (108.967,130.656,86.169)
O5': (109.108,128.439,89.089)
O3': (111.280,132.256,89.404)
C4: (106.561,135.255,86.221)
N3: (106.991,136.501,86.599)
OP1: (106.886,134.561,78.540)
OP2: (106.398,133.477,80.811)
C2: (107.436,137.501,85.785)
C1': (107.775,138.281,83.495)
C3': (109.152,137.680,81.656)
O5': (107.160,135.827,80.677)
O4': (106.953,138.156,82.353)
C5': (107.147,137.171,80.167)
P: (106.374,134.666,79.930)
C4': (107.778,138.103,81.166)
C2': (109.230,138.360,83.020)
O2': (109.562,139.727,82.895)
N1: (107.419,137.208,84.437)
O4: (106.106,134.492,87.072)
O2: (107.819,138.560,86.230)
C6: (107.041,135.965,83.995)
C5: (106.623,135.004,84.819)
O3': (110.154,138.182,80.769)
Image (generated by PyMOL):
PyMOL image
show in jmol