ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02540:02532

Extra

PDB:
ATOM 1 O3' G A2539 83.742 128.224 160.345 1.00 81.87 O
ATOM 2 P G A2540 82.604 129.294 159.943 1.00 78.96 P
ATOM 3 OP1 G A2540 82.295 129.051 158.513 1.00 78.72 O
ATOM 4 OP2 G A2540 83.025 130.649 160.380 1.00 79.47 O
ATOM 5 O5' G A2540 81.332 128.872 160.802 1.00 78.01 O
ATOM 6 C5' G A2540 80.397 127.895 160.312 1.00 76.02 C
ATOM 7 C4' G A2540 79.158 127.888 161.174 1.00 74.90 C
ATOM 8 O4' G A2540 79.495 127.434 162.512 1.00 75.24 O
ATOM 9 C3' G A2540 78.525 129.248 161.402 1.00 73.09 C
ATOM 10 O3' G A2540 77.704 129.636 160.316 1.00 71.30 O
ATOM 11 C2' G A2540 77.744 129.023 162.687 1.00 73.59 C
ATOM 12 O2' G A2540 76.534 128.329 162.473 1.00 71.80 O
ATOM 13 C1' G A2540 78.720 128.142 163.469 1.00 74.73 C
ATOM 14 N9 G A2540 79.626 128.934 164.297 1.00 76.04 N
ATOM 15 C8 G A2540 80.900 129.342 163.977 1.00 76.51 C
ATOM 16 N7 G A2540 81.454 130.067 164.909 1.00 77.03 N
ATOM 17 C5 G A2540 80.490 130.141 165.907 1.00 76.93 C
ATOM 18 C6 G A2540 80.515 130.802 167.162 1.00 77.18 C
ATOM 19 O6 G A2540 81.420 131.477 167.658 1.00 78.87 O
ATOM 20 N1 G A2540 79.328 130.620 167.860 1.00 76.12 N
ATOM 21 C2 G A2540 78.256 129.898 167.415 1.00 75.91 C
ATOM 22 N2 G A2540 77.203 129.846 168.237 1.00 75.02 N
ATOM 23 N3 G A2540 78.218 129.274 166.249 1.00 76.86 N
ATOM 24 C4 G A2540 79.361 129.440 165.550 1.00 76.46 C
ATOM 25 P A A2541 77.058 131.105 160.296 1.00 70.54 P
ATOM 26 OP1 A A2541 76.425 131.279 158.970 1.00 71.59 O
ATOM 27 OP2 A A2541 78.081 132.082 160.754 1.00 70.99 O
ATOM 28 O5' A A2541 75.908 131.020 161.394 1.00 68.82 O
TER

ATOM 1 O3' G B2531 78.862 133.962 170.358 1.00 77.68 O
ATOM 2 P U B2532 79.271 132.682 171.247 1.00 77.76 P
ATOM 3 OP1 U B2532 80.021 133.165 172.432 1.00 78.04 O
ATOM 4 OP2 U B2532 79.878 131.641 170.375 1.00 77.13 O
ATOM 5 O5' U B2532 77.865 132.123 171.735 1.00 76.48 O
ATOM 6 C5' U B2532 77.096 132.836 172.715 1.00 74.80 C
ATOM 7 C4' U B2532 75.631 132.764 172.381 1.00 73.43 C
ATOM 8 O4' U B2532 75.349 133.599 171.232 1.00 73.65 O
ATOM 9 C3' U B2532 75.125 131.392 171.981 1.00 72.80 C
ATOM 10 O3' U B2532 74.875 130.572 173.112 1.00 72.22 O
ATOM 11 C2' U B2532 73.867 131.736 171.199 1.00 73.95 C
ATOM 12 O2' U B2532 72.765 132.026 172.037 1.00 72.40 O
ATOM 13 C1' U B2532 74.319 133.002 170.453 1.00 74.52 C
ATOM 14 N1 U B2532 74.847 132.750 169.097 1.00 74.55 N
ATOM 15 C2 U B2532 74.009 132.150 168.166 1.00 74.45 C
ATOM 16 O2 U B2532 72.856 131.834 168.412 1.00 75.09 O
ATOM 17 N3 U B2532 74.573 131.932 166.935 1.00 74.09 N
ATOM 18 C4 U B2532 75.852 132.247 166.538 1.00 74.65 C
ATOM 19 O4 U B2532 76.215 131.973 165.393 1.00 74.75 O
ATOM 20 C5 U B2532 76.652 132.869 167.544 1.00 75.00 C
ATOM 21 C6 U B2532 76.138 133.095 168.756 1.00 74.64 C
ATOM 22 P A B2533 75.447 129.070 173.148 1.00 72.09 P
ATOM 23 OP1 A B2533 75.577 128.670 174.571 1.00 72.46 O
ATOM 24 OP2 A B2533 76.631 128.978 172.252 1.00 69.93 O
ATOM 25 O5' A B2533 74.255 128.213 172.541 1.00 72.19 O
TER

Atoms:
OP1: (82.295,129.051,158.513)
OP2: (83.025,130.649,160.380)
C3': (78.525,129.248,161.402)
C1': (78.720,128.142,163.469)
C5': (80.397,127.895,160.312)
O6: (81.420,131.477,167.658)
O4': (79.495,127.434,162.512)
C8: (80.900,129.342,163.977)
C2: (78.256,129.898,167.415)
C6: (80.515,130.802,167.162)
C5: (80.490,130.141,165.907)
C4: (79.361,129.440,165.550)
P: (82.604,129.294,159.943)
C4': (79.158,127.888,161.174)
C2': (77.744,129.023,162.687)
O2': (76.534,128.329,162.473)
N1: (79.328,130.620,167.860)
N2: (77.203,129.846,168.237)
N3: (78.218,129.274,166.249)
N7: (81.454,130.067,164.909)
N9: (79.626,128.934,164.297)
O5': (81.332,128.872,160.802)
O3': (77.704,129.636,160.316)
C4: (75.852,132.247,166.538)
N3: (74.573,131.932,166.935)
OP1: (80.021,133.165,172.432)
OP2: (79.878,131.641,170.375)
C2: (74.009,132.150,168.166)
C1': (74.319,133.002,170.453)
C3': (75.125,131.392,171.981)
O5': (77.865,132.123,171.735)
O4': (75.349,133.599,171.232)
C5': (77.096,132.836,172.715)
P: (79.271,132.682,171.247)
C4': (75.631,132.764,172.381)
C2': (73.867,131.736,171.199)
O2': (72.765,132.026,172.037)
N1: (74.847,132.750,169.097)
O4: (76.215,131.973,165.393)
O2: (72.856,131.834,168.412)
C6: (76.138,133.095,168.756)
C5: (76.652,132.869,167.544)
O3': (74.875,130.572,173.112)
Image (generated by PyMOL):
PyMOL image
show in jmol