Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1928:A1216
Extra
PDB:
ATOM 1 O3' U A1927 46.474 -81.791 -7.238 1.00 28.93 O
ATOM 2 P G A1928 47.840 -82.551 -7.529 1.00 28.87 P
ATOM 3 OP1 G A1928 47.878 -82.881 -8.965 1.00 31.80 O
ATOM 4 OP2 G A1928 47.925 -83.652 -6.539 1.00 23.67 O
ATOM 5 O5' G A1928 48.925 -81.421 -7.211 1.00 32.02 O
ATOM 6 C5' G A1928 48.953 -80.202 -7.956 1.00 27.92 C
ATOM 7 C4' G A1928 49.952 -79.213 -7.392 1.00 28.97 C
ATOM 8 O4' G A1928 49.674 -78.975 -5.997 1.00 37.42 O
ATOM 9 C3' G A1928 51.396 -79.655 -7.411 1.00 28.06 C
ATOM 10 O3' G A1928 52.016 -79.398 -8.638 1.00 33.72 O
ATOM 11 C2' G A1928 52.017 -78.884 -6.275 1.00 27.83 C
ATOM 12 O2' G A1928 52.290 -77.573 -6.687 1.00 28.88 O
ATOM 13 C1' G A1928 50.882 -78.844 -5.273 1.00 30.06 C
ATOM 14 N9 G A1928 50.964 -79.947 -4.308 1.00 25.33 N
ATOM 15 C8 G A1928 50.285 -81.114 -4.449 1.00 32.90 C
ATOM 16 N7 G A1928 50.478 -81.956 -3.490 1.00 35.50 N
ATOM 17 C5 G A1928 51.354 -81.293 -2.661 1.00 31.74 C
ATOM 18 C6 G A1928 51.910 -81.741 -1.451 1.00 32.93 C
ATOM 19 O6 G A1928 51.712 -82.829 -0.901 1.00 37.53 O
ATOM 20 N1 G A1928 52.745 -80.798 -0.897 1.00 28.94 N
ATOM 21 C2 G A1928 52.972 -79.581 -1.461 1.00 32.00 C
ATOM 22 N2 G A1928 53.797 -78.793 -0.790 1.00 35.02 N
ATOM 23 N3 G A1928 52.458 -79.145 -2.596 1.00 33.92 N
ATOM 24 C4 G A1928 51.658 -80.055 -3.145 1.00 27.80 C
ATOM 25 P A A1929 53.467 -80.007 -8.932 1.00 31.31 P
ATOM 26 OP1 A A1929 53.646 -80.022 -10.423 1.00 24.80 O
ATOM 27 OP2 A A1929 53.576 -81.309 -8.160 1.00 16.84 O
ATOM 28 O5' A A1929 54.403 -78.907 -8.289 1.00 22.40 O
TER
ATOM 1 O3' G B1215 55.291 -82.420 1.381 1.00 27.18 O
ATOM 2 P U B1216 54.515 -81.534 2.455 1.00 34.29 P
ATOM 3 OP1 U B1216 54.405 -82.337 3.720 1.00 31.87 O
ATOM 4 OP2 U B1216 53.281 -81.040 1.802 1.00 38.13 O
ATOM 5 O5' U B1216 55.504 -80.339 2.670 1.00 30.37 O
ATOM 6 C5' U B1216 56.792 -80.565 3.181 1.00 26.79 C
ATOM 7 C4' U B1216 57.756 -79.563 2.646 1.00 28.24 C
ATOM 8 O4' U B1216 58.185 -79.983 1.347 1.00 32.90 O
ATOM 9 C3' U B1216 57.208 -78.156 2.447 1.00 27.35 C
ATOM 10 O3' U B1216 57.316 -77.373 3.633 1.00 28.87 O
ATOM 11 C2' U B1216 58.044 -77.615 1.289 1.00 30.84 C
ATOM 12 O2' U B1216 59.249 -77.024 1.763 1.00 28.56 O
ATOM 13 C1' U B1216 58.406 -78.881 0.523 1.00 29.67 C
ATOM 14 N1 U B1216 57.634 -79.070 -0.701 1.00 25.08 N
ATOM 15 C2 U B1216 57.725 -78.183 -1.753 1.00 31.54 C
ATOM 16 O2 U B1216 58.336 -77.135 -1.766 1.00 29.39 O
ATOM 17 N3 U B1216 57.002 -78.540 -2.841 1.00 34.09 N
ATOM 18 C4 U B1216 56.252 -79.663 -3.001 1.00 31.57 C
ATOM 19 O4 U B1216 55.676 -79.797 -4.075 1.00 27.81 O
ATOM 20 C5 U B1216 56.240 -80.549 -1.876 1.00 31.35 C
ATOM 21 C6 U B1216 56.930 -80.229 -0.795 1.00 25.45 C
ATOM 22 P A B1217 56.279 -76.177 3.948 1.00 36.25 P
ATOM 23 OP1 A B1217 56.759 -75.528 5.209 1.00 37.28 O
ATOM 24 OP2 A B1217 54.910 -76.746 3.915 1.00 44.82 O
ATOM 25 O5' A B1217 56.464 -75.178 2.735 1.00 19.02 O
TER
ATOM 2 P G A1928 47.840 -82.551 -7.529 1.00 28.87 P
ATOM 3 OP1 G A1928 47.878 -82.881 -8.965 1.00 31.80 O
ATOM 4 OP2 G A1928 47.925 -83.652 -6.539 1.00 23.67 O
ATOM 5 O5' G A1928 48.925 -81.421 -7.211 1.00 32.02 O
ATOM 6 C5' G A1928 48.953 -80.202 -7.956 1.00 27.92 C
ATOM 7 C4' G A1928 49.952 -79.213 -7.392 1.00 28.97 C
ATOM 8 O4' G A1928 49.674 -78.975 -5.997 1.00 37.42 O
ATOM 9 C3' G A1928 51.396 -79.655 -7.411 1.00 28.06 C
ATOM 10 O3' G A1928 52.016 -79.398 -8.638 1.00 33.72 O
ATOM 11 C2' G A1928 52.017 -78.884 -6.275 1.00 27.83 C
ATOM 12 O2' G A1928 52.290 -77.573 -6.687 1.00 28.88 O
ATOM 13 C1' G A1928 50.882 -78.844 -5.273 1.00 30.06 C
ATOM 14 N9 G A1928 50.964 -79.947 -4.308 1.00 25.33 N
ATOM 15 C8 G A1928 50.285 -81.114 -4.449 1.00 32.90 C
ATOM 16 N7 G A1928 50.478 -81.956 -3.490 1.00 35.50 N
ATOM 17 C5 G A1928 51.354 -81.293 -2.661 1.00 31.74 C
ATOM 18 C6 G A1928 51.910 -81.741 -1.451 1.00 32.93 C
ATOM 19 O6 G A1928 51.712 -82.829 -0.901 1.00 37.53 O
ATOM 20 N1 G A1928 52.745 -80.798 -0.897 1.00 28.94 N
ATOM 21 C2 G A1928 52.972 -79.581 -1.461 1.00 32.00 C
ATOM 22 N2 G A1928 53.797 -78.793 -0.790 1.00 35.02 N
ATOM 23 N3 G A1928 52.458 -79.145 -2.596 1.00 33.92 N
ATOM 24 C4 G A1928 51.658 -80.055 -3.145 1.00 27.80 C
ATOM 25 P A A1929 53.467 -80.007 -8.932 1.00 31.31 P
ATOM 26 OP1 A A1929 53.646 -80.022 -10.423 1.00 24.80 O
ATOM 27 OP2 A A1929 53.576 -81.309 -8.160 1.00 16.84 O
ATOM 28 O5' A A1929 54.403 -78.907 -8.289 1.00 22.40 O
TER
ATOM 1 O3' G B1215 55.291 -82.420 1.381 1.00 27.18 O
ATOM 2 P U B1216 54.515 -81.534 2.455 1.00 34.29 P
ATOM 3 OP1 U B1216 54.405 -82.337 3.720 1.00 31.87 O
ATOM 4 OP2 U B1216 53.281 -81.040 1.802 1.00 38.13 O
ATOM 5 O5' U B1216 55.504 -80.339 2.670 1.00 30.37 O
ATOM 6 C5' U B1216 56.792 -80.565 3.181 1.00 26.79 C
ATOM 7 C4' U B1216 57.756 -79.563 2.646 1.00 28.24 C
ATOM 8 O4' U B1216 58.185 -79.983 1.347 1.00 32.90 O
ATOM 9 C3' U B1216 57.208 -78.156 2.447 1.00 27.35 C
ATOM 10 O3' U B1216 57.316 -77.373 3.633 1.00 28.87 O
ATOM 11 C2' U B1216 58.044 -77.615 1.289 1.00 30.84 C
ATOM 12 O2' U B1216 59.249 -77.024 1.763 1.00 28.56 O
ATOM 13 C1' U B1216 58.406 -78.881 0.523 1.00 29.67 C
ATOM 14 N1 U B1216 57.634 -79.070 -0.701 1.00 25.08 N
ATOM 15 C2 U B1216 57.725 -78.183 -1.753 1.00 31.54 C
ATOM 16 O2 U B1216 58.336 -77.135 -1.766 1.00 29.39 O
ATOM 17 N3 U B1216 57.002 -78.540 -2.841 1.00 34.09 N
ATOM 18 C4 U B1216 56.252 -79.663 -3.001 1.00 31.57 C
ATOM 19 O4 U B1216 55.676 -79.797 -4.075 1.00 27.81 O
ATOM 20 C5 U B1216 56.240 -80.549 -1.876 1.00 31.35 C
ATOM 21 C6 U B1216 56.930 -80.229 -0.795 1.00 25.45 C
ATOM 22 P A B1217 56.279 -76.177 3.948 1.00 36.25 P
ATOM 23 OP1 A B1217 56.759 -75.528 5.209 1.00 37.28 O
ATOM 24 OP2 A B1217 54.910 -76.746 3.915 1.00 44.82 O
ATOM 25 O5' A B1217 56.464 -75.178 2.735 1.00 19.02 O
TER
Atoms:
OP1: (47.878,-82.881,-8.965)
OP2: (47.925,-83.652,-6.539)
C3': (51.396,-79.655,-7.411)
C1': (50.882,-78.844,-5.273)
C5': (48.953,-80.202,-7.956)
O6: (51.712,-82.829,-0.901)
O4': (49.674,-78.975,-5.997)
C8: (50.285,-81.114,-4.449)
C2: (52.972,-79.581,-1.461)
C6: (51.910,-81.741,-1.451)
C5: (51.354,-81.293,-2.661)
C4: (51.658,-80.055,-3.145)
P: (47.840,-82.551,-7.529)
C4': (49.952,-79.213,-7.392)
C2': (52.017,-78.884,-6.275)
O2': (52.290,-77.573,-6.687)
N1: (52.745,-80.798,-0.897)
N2: (53.797,-78.793,-0.790)
N3: (52.458,-79.145,-2.596)
N7: (50.478,-81.956,-3.490)
N9: (50.964,-79.947,-4.308)
O5': (48.925,-81.421,-7.211)
O3': (52.016,-79.398,-8.638)
OP2: (47.925,-83.652,-6.539)
C3': (51.396,-79.655,-7.411)
C1': (50.882,-78.844,-5.273)
C5': (48.953,-80.202,-7.956)
O6: (51.712,-82.829,-0.901)
O4': (49.674,-78.975,-5.997)
C8: (50.285,-81.114,-4.449)
C2: (52.972,-79.581,-1.461)
C6: (51.910,-81.741,-1.451)
C5: (51.354,-81.293,-2.661)
C4: (51.658,-80.055,-3.145)
P: (47.840,-82.551,-7.529)
C4': (49.952,-79.213,-7.392)
C2': (52.017,-78.884,-6.275)
O2': (52.290,-77.573,-6.687)
N1: (52.745,-80.798,-0.897)
N2: (53.797,-78.793,-0.790)
N3: (52.458,-79.145,-2.596)
N7: (50.478,-81.956,-3.490)
N9: (50.964,-79.947,-4.308)
O5': (48.925,-81.421,-7.211)
O3': (52.016,-79.398,-8.638)
C4: (56.252,-79.663,-3.001)
N3: (57.002,-78.540,-2.841)
OP1: (54.405,-82.337,3.720)
OP2: (53.281,-81.040,1.802)
C2: (57.725,-78.183,-1.753)
C1': (58.406,-78.881,0.523)
C3': (57.208,-78.156,2.447)
O5': (55.504,-80.339,2.670)
O4': (58.185,-79.983,1.347)
C5': (56.792,-80.565,3.181)
P: (54.515,-81.534,2.455)
C4': (57.756,-79.563,2.646)
C2': (58.044,-77.615,1.289)
O2': (59.249,-77.024,1.763)
N1: (57.634,-79.070,-0.701)
O4: (55.676,-79.797,-4.075)
O2: (58.336,-77.135,-1.766)
C6: (56.930,-80.229,-0.795)
C5: (56.240,-80.549,-1.876)
O3': (57.316,-77.373,3.633)
N3: (57.002,-78.540,-2.841)
OP1: (54.405,-82.337,3.720)
OP2: (53.281,-81.040,1.802)
C2: (57.725,-78.183,-1.753)
C1': (58.406,-78.881,0.523)
C3': (57.208,-78.156,2.447)
O5': (55.504,-80.339,2.670)
O4': (58.185,-79.983,1.347)
C5': (56.792,-80.565,3.181)
P: (54.515,-81.534,2.455)
C4': (57.756,-79.563,2.646)
C2': (58.044,-77.615,1.289)
O2': (59.249,-77.024,1.763)
N1: (57.634,-79.070,-0.701)
O4: (55.676,-79.797,-4.075)
O2: (58.336,-77.135,-1.766)
C6: (56.930,-80.229,-0.795)
C5: (56.240,-80.549,-1.876)
O3': (57.316,-77.373,3.633)
Image (generated by PyMOL):