Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CPW:0556:0577
Extra
PDB:
ATOM 1 O3' U A 555 4.239 92.309 108.111 1.00 51.56 O
ATOM 2 P G A 556 3.692 91.687 109.490 1.00 50.74 P
ATOM 3 OP1 G A 556 4.668 92.019 110.559 1.00 51.42 O
ATOM 4 OP2 G A 556 3.342 90.264 109.238 1.00 48.46 O
ATOM 5 O5' G A 556 2.363 92.522 109.770 1.00 49.99 O
ATOM 6 C5' G A 556 2.426 93.857 110.306 1.00 50.70 C
ATOM 7 C4' G A 556 1.031 94.393 110.554 1.00 53.12 C
ATOM 8 O4' G A 556 0.339 94.553 109.285 1.00 54.33 O
ATOM 9 C3' G A 556 0.113 93.488 111.363 1.00 54.24 C
ATOM 10 O3' G A 556 0.294 93.577 112.766 1.00 55.73 O
ATOM 11 C2' G A 556 -1.273 93.934 110.920 1.00 53.47 C
ATOM 12 O2' G A 556 -1.713 95.111 111.570 1.00 52.77 O
ATOM 13 C1' G A 556 -1.036 94.219 109.439 1.00 52.38 C
ATOM 14 N9 G A 556 -1.320 93.038 108.624 1.00 49.48 N
ATOM 15 C8 G A 556 -0.430 92.064 108.238 1.00 49.11 C
ATOM 16 N7 G A 556 -0.976 91.126 107.516 1.00 48.31 N
ATOM 17 C5 G A 556 -2.308 91.501 107.419 1.00 48.60 C
ATOM 18 C6 G A 556 -3.380 90.876 106.751 1.00 48.45 C
ATOM 19 O6 G A 556 -3.360 89.833 106.088 1.00 49.91 O
ATOM 20 N1 G A 556 -4.569 91.589 106.903 1.00 46.25 N
ATOM 21 C2 G A 556 -4.701 92.760 107.612 1.00 48.77 C
ATOM 22 N2 G A 556 -5.933 93.307 107.658 1.00 47.40 N
ATOM 23 N3 G A 556 -3.697 93.358 108.238 1.00 49.99 N
ATOM 24 C4 G A 556 -2.537 92.678 108.099 1.00 49.41 C
ATOM 25 P A A 557 -0.118 92.327 113.687 1.00 58.00 P
ATOM 26 OP1 A A 557 0.494 92.546 115.023 1.00 58.36 O
ATOM 27 OP2 A A 557 0.146 91.056 112.961 1.00 55.67 O
ATOM 28 O5' A A 557 -1.695 92.487 113.811 1.00 57.95 O
TER
ATOM 1 O3' G B 576 -7.787 88.847 106.893 1.00 68.71 O
ATOM 2 P U B 577 -8.130 89.835 105.661 1.00 69.97 P
ATOM 3 OP1 U B 577 -8.717 89.057 104.534 1.00 68.02 O
ATOM 4 OP2 U B 577 -6.940 90.688 105.414 1.00 70.42 O
ATOM 5 O5' U B 577 -9.245 90.797 106.280 1.00 69.23 O
ATOM 6 C5' U B 577 -10.565 90.308 106.634 1.00 66.09 C
ATOM 7 C4' U B 577 -11.106 91.069 107.826 1.00 65.28 C
ATOM 8 O4' U B 577 -10.482 90.604 109.051 1.00 65.48 O
ATOM 9 C3' U B 577 -10.861 92.566 107.808 1.00 65.30 C
ATOM 10 O3' U B 577 -11.837 93.261 107.042 1.00 66.12 O
ATOM 11 C2' U B 577 -10.900 92.943 109.286 1.00 65.68 C
ATOM 12 O2' U B 577 -12.204 93.177 109.773 1.00 66.39 O
ATOM 13 C1' U B 577 -10.328 91.689 109.957 1.00 64.96 C
ATOM 14 N1 U B 577 -8.909 91.792 110.357 1.00 63.98 N
ATOM 15 C2 U B 577 -8.552 92.788 111.258 1.00 63.21 C
ATOM 16 O2 U B 577 -9.350 93.574 111.734 1.00 63.69 O
ATOM 17 N3 U B 577 -7.220 92.828 111.581 1.00 63.44 N
ATOM 18 C4 U B 577 -6.222 92.001 111.113 1.00 64.88 C
ATOM 19 O4 U B 577 -5.061 92.185 111.483 1.00 66.41 O
ATOM 20 C5 U B 577 -6.662 90.995 110.195 1.00 64.71 C
ATOM 21 C6 U B 577 -7.954 90.926 109.855 1.00 64.56 C
ATOM 22 P A B 578 -11.440 94.644 106.322 1.00 67.18 P
ATOM 23 OP1 A B 578 -12.605 95.168 105.570 1.00 67.62 O
ATOM 24 OP2 A B 578 -10.159 94.409 105.604 1.00 68.62 O
ATOM 25 O5' A B 578 -11.148 95.634 107.534 1.00 65.36 O
TER
ATOM 2 P G A 556 3.692 91.687 109.490 1.00 50.74 P
ATOM 3 OP1 G A 556 4.668 92.019 110.559 1.00 51.42 O
ATOM 4 OP2 G A 556 3.342 90.264 109.238 1.00 48.46 O
ATOM 5 O5' G A 556 2.363 92.522 109.770 1.00 49.99 O
ATOM 6 C5' G A 556 2.426 93.857 110.306 1.00 50.70 C
ATOM 7 C4' G A 556 1.031 94.393 110.554 1.00 53.12 C
ATOM 8 O4' G A 556 0.339 94.553 109.285 1.00 54.33 O
ATOM 9 C3' G A 556 0.113 93.488 111.363 1.00 54.24 C
ATOM 10 O3' G A 556 0.294 93.577 112.766 1.00 55.73 O
ATOM 11 C2' G A 556 -1.273 93.934 110.920 1.00 53.47 C
ATOM 12 O2' G A 556 -1.713 95.111 111.570 1.00 52.77 O
ATOM 13 C1' G A 556 -1.036 94.219 109.439 1.00 52.38 C
ATOM 14 N9 G A 556 -1.320 93.038 108.624 1.00 49.48 N
ATOM 15 C8 G A 556 -0.430 92.064 108.238 1.00 49.11 C
ATOM 16 N7 G A 556 -0.976 91.126 107.516 1.00 48.31 N
ATOM 17 C5 G A 556 -2.308 91.501 107.419 1.00 48.60 C
ATOM 18 C6 G A 556 -3.380 90.876 106.751 1.00 48.45 C
ATOM 19 O6 G A 556 -3.360 89.833 106.088 1.00 49.91 O
ATOM 20 N1 G A 556 -4.569 91.589 106.903 1.00 46.25 N
ATOM 21 C2 G A 556 -4.701 92.760 107.612 1.00 48.77 C
ATOM 22 N2 G A 556 -5.933 93.307 107.658 1.00 47.40 N
ATOM 23 N3 G A 556 -3.697 93.358 108.238 1.00 49.99 N
ATOM 24 C4 G A 556 -2.537 92.678 108.099 1.00 49.41 C
ATOM 25 P A A 557 -0.118 92.327 113.687 1.00 58.00 P
ATOM 26 OP1 A A 557 0.494 92.546 115.023 1.00 58.36 O
ATOM 27 OP2 A A 557 0.146 91.056 112.961 1.00 55.67 O
ATOM 28 O5' A A 557 -1.695 92.487 113.811 1.00 57.95 O
TER
ATOM 1 O3' G B 576 -7.787 88.847 106.893 1.00 68.71 O
ATOM 2 P U B 577 -8.130 89.835 105.661 1.00 69.97 P
ATOM 3 OP1 U B 577 -8.717 89.057 104.534 1.00 68.02 O
ATOM 4 OP2 U B 577 -6.940 90.688 105.414 1.00 70.42 O
ATOM 5 O5' U B 577 -9.245 90.797 106.280 1.00 69.23 O
ATOM 6 C5' U B 577 -10.565 90.308 106.634 1.00 66.09 C
ATOM 7 C4' U B 577 -11.106 91.069 107.826 1.00 65.28 C
ATOM 8 O4' U B 577 -10.482 90.604 109.051 1.00 65.48 O
ATOM 9 C3' U B 577 -10.861 92.566 107.808 1.00 65.30 C
ATOM 10 O3' U B 577 -11.837 93.261 107.042 1.00 66.12 O
ATOM 11 C2' U B 577 -10.900 92.943 109.286 1.00 65.68 C
ATOM 12 O2' U B 577 -12.204 93.177 109.773 1.00 66.39 O
ATOM 13 C1' U B 577 -10.328 91.689 109.957 1.00 64.96 C
ATOM 14 N1 U B 577 -8.909 91.792 110.357 1.00 63.98 N
ATOM 15 C2 U B 577 -8.552 92.788 111.258 1.00 63.21 C
ATOM 16 O2 U B 577 -9.350 93.574 111.734 1.00 63.69 O
ATOM 17 N3 U B 577 -7.220 92.828 111.581 1.00 63.44 N
ATOM 18 C4 U B 577 -6.222 92.001 111.113 1.00 64.88 C
ATOM 19 O4 U B 577 -5.061 92.185 111.483 1.00 66.41 O
ATOM 20 C5 U B 577 -6.662 90.995 110.195 1.00 64.71 C
ATOM 21 C6 U B 577 -7.954 90.926 109.855 1.00 64.56 C
ATOM 22 P A B 578 -11.440 94.644 106.322 1.00 67.18 P
ATOM 23 OP1 A B 578 -12.605 95.168 105.570 1.00 67.62 O
ATOM 24 OP2 A B 578 -10.159 94.409 105.604 1.00 68.62 O
ATOM 25 O5' A B 578 -11.148 95.634 107.534 1.00 65.36 O
TER
Atoms:
OP1: (4.668,92.019,110.559)
OP2: (3.342,90.264,109.238)
C3': (0.113,93.488,111.363)
C1': (-1.036,94.219,109.439)
C5': (2.426,93.857,110.306)
O6: (-3.360,89.833,106.088)
O4': (0.339,94.553,109.285)
C8: (-0.430,92.064,108.238)
C2: (-4.701,92.760,107.612)
C6: (-3.380,90.876,106.751)
C5: (-2.308,91.501,107.419)
C4: (-2.537,92.678,108.099)
P: (3.692,91.687,109.490)
C4': (1.031,94.393,110.554)
C2': (-1.273,93.934,110.920)
O2': (-1.713,95.111,111.570)
N1: (-4.569,91.589,106.903)
N2: (-5.933,93.307,107.658)
N3: (-3.697,93.358,108.238)
N7: (-0.976,91.126,107.516)
N9: (-1.320,93.038,108.624)
O5': (2.363,92.522,109.770)
O3': (0.294,93.577,112.766)
OP2: (3.342,90.264,109.238)
C3': (0.113,93.488,111.363)
C1': (-1.036,94.219,109.439)
C5': (2.426,93.857,110.306)
O6: (-3.360,89.833,106.088)
O4': (0.339,94.553,109.285)
C8: (-0.430,92.064,108.238)
C2: (-4.701,92.760,107.612)
C6: (-3.380,90.876,106.751)
C5: (-2.308,91.501,107.419)
C4: (-2.537,92.678,108.099)
P: (3.692,91.687,109.490)
C4': (1.031,94.393,110.554)
C2': (-1.273,93.934,110.920)
O2': (-1.713,95.111,111.570)
N1: (-4.569,91.589,106.903)
N2: (-5.933,93.307,107.658)
N3: (-3.697,93.358,108.238)
N7: (-0.976,91.126,107.516)
N9: (-1.320,93.038,108.624)
O5': (2.363,92.522,109.770)
O3': (0.294,93.577,112.766)
C4: (-6.222,92.001,111.113)
N3: (-7.220,92.828,111.581)
OP1: (-8.717,89.057,104.534)
OP2: (-6.940,90.688,105.414)
C2: (-8.552,92.788,111.258)
C1': (-10.328,91.689,109.957)
C3': (-10.861,92.566,107.808)
O5': (-9.245,90.797,106.280)
O4': (-10.482,90.604,109.051)
C5': (-10.565,90.308,106.634)
P: (-8.130,89.835,105.661)
C4': (-11.106,91.069,107.826)
C2': (-10.900,92.943,109.286)
O2': (-12.204,93.177,109.773)
N1: (-8.909,91.792,110.357)
O4: (-5.061,92.185,111.483)
O2: (-9.350,93.574,111.734)
C6: (-7.954,90.926,109.855)
C5: (-6.662,90.995,110.195)
O3': (-11.837,93.261,107.042)
N3: (-7.220,92.828,111.581)
OP1: (-8.717,89.057,104.534)
OP2: (-6.940,90.688,105.414)
C2: (-8.552,92.788,111.258)
C1': (-10.328,91.689,109.957)
C3': (-10.861,92.566,107.808)
O5': (-9.245,90.797,106.280)
O4': (-10.482,90.604,109.051)
C5': (-10.565,90.308,106.634)
P: (-8.130,89.835,105.661)
C4': (-11.106,91.069,107.826)
C2': (-10.900,92.943,109.286)
O2': (-12.204,93.177,109.773)
N1: (-8.909,91.792,110.357)
O4: (-5.061,92.185,111.483)
O2: (-9.350,93.574,111.734)
C6: (-7.954,90.926,109.855)
C5: (-6.662,90.995,110.195)
O3': (-11.837,93.261,107.042)
Image (generated by PyMOL):