ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QA4:0556:0577

Extra

PDB:
ATOM 1 O3' U A 555 4.489 94.347 108.849 1.00 45.87 O
ATOM 2 P G A 556 3.836 93.590 110.099 1.00 47.41 P
ATOM 3 OP1 G A 556 4.779 93.680 111.251 1.00 47.82 O
ATOM 4 OP2 G A 556 3.402 92.253 109.597 1.00 45.91 O
ATOM 5 O5' G A 556 2.538 94.448 110.430 1.00 46.01 O
ATOM 6 C5' G A 556 2.641 95.785 110.918 1.00 47.62 C
ATOM 7 C4' G A 556 1.262 96.350 111.193 1.00 50.57 C
ATOM 8 O4' G A 556 0.554 96.583 109.947 1.00 52.47 O
ATOM 9 C3' G A 556 0.302 95.482 111.988 1.00 50.57 C
ATOM 10 O3' G A 556 0.547 95.536 113.382 1.00 49.80 O
ATOM 11 C2' G A 556 -1.034 96.101 111.619 1.00 51.37 C
ATOM 12 O2' G A 556 -1.232 97.348 112.262 1.00 50.15 O
ATOM 13 C1' G A 556 -0.828 96.320 110.123 1.00 52.40 C
ATOM 14 N9 G A 556 -1.127 95.094 109.396 1.00 54.62 N
ATOM 15 C8 G A 556 -0.261 94.057 109.154 1.00 54.51 C
ATOM 16 N7 G A 556 -0.812 93.072 108.503 1.00 55.68 N
ATOM 17 C5 G A 556 -2.121 93.486 108.300 1.00 56.58 C
ATOM 18 C6 G A 556 -3.199 92.832 107.663 1.00 56.67 C
ATOM 19 O6 G A 556 -3.214 91.719 107.128 1.00 58.08 O
ATOM 20 N1 G A 556 -4.351 93.606 107.688 1.00 55.48 N
ATOM 21 C2 G A 556 -4.453 94.844 108.256 1.00 55.41 C
ATOM 22 N2 G A 556 -5.653 95.417 108.191 1.00 57.20 N
ATOM 23 N3 G A 556 -3.456 95.469 108.848 1.00 55.19 N
ATOM 24 C4 G A 556 -2.328 94.736 108.838 1.00 55.76 C
ATOM 25 P A A 557 0.133 94.292 114.302 1.00 48.68 P
ATOM 26 OP1 A A 557 0.922 94.447 115.531 1.00 48.52 O
ATOM 27 OP2 A A 557 0.207 93.013 113.521 1.00 45.24 O
ATOM 28 O5' A A 557 -1.381 94.603 114.668 1.00 50.94 O
TER

ATOM 1 O3' G B 576 -7.502 90.851 107.892 1.00 74.31 O
ATOM 2 P U B 577 -7.750 91.758 106.588 1.00 74.90 P
ATOM 3 OP1 U B 577 -8.297 90.867 105.522 1.00 74.76 O
ATOM 4 OP2 U B 577 -6.528 92.556 106.315 1.00 74.26 O
ATOM 5 O5' U B 577 -8.869 92.783 107.081 1.00 71.68 O
ATOM 6 C5' U B 577 -10.181 92.323 107.474 1.00 68.56 C
ATOM 7 C4' U B 577 -10.686 93.108 108.664 1.00 66.45 C
ATOM 8 O4' U B 577 -10.046 92.652 109.882 1.00 63.83 O
ATOM 9 C3' U B 577 -10.421 94.604 108.614 1.00 66.69 C
ATOM 10 O3' U B 577 -11.419 95.292 107.859 1.00 67.45 O
ATOM 11 C2' U B 577 -10.448 95.004 110.087 1.00 66.62 C
ATOM 12 O2' U B 577 -11.755 95.287 110.544 1.00 67.02 O
ATOM 13 C1' U B 577 -9.872 93.750 110.769 1.00 64.42 C
ATOM 14 N1 U B 577 -8.446 93.841 111.127 1.00 61.75 N
ATOM 15 C2 U B 577 -8.034 94.887 111.939 1.00 59.26 C
ATOM 16 O2 U B 577 -8.787 95.746 112.351 1.00 56.76 O
ATOM 17 N3 U B 577 -6.698 94.893 112.239 1.00 58.57 N
ATOM 18 C4 U B 577 -5.746 93.995 111.807 1.00 59.53 C
ATOM 19 O4 U B 577 -4.564 94.193 112.079 1.00 59.36 O
ATOM 20 C5 U B 577 -6.244 92.950 110.974 1.00 60.38 C
ATOM 21 C6 U B 577 -7.542 92.907 110.670 1.00 61.35 C
ATOM 22 P A B 578 -11.116 96.763 107.290 1.00 68.54 P
ATOM 23 OP1 A B 578 -12.349 97.301 106.685 1.00 69.29 O
ATOM 24 OP2 A B 578 -9.878 96.687 106.473 1.00 70.18 O
ATOM 25 O5' A B 578 -10.828 97.618 108.596 1.00 66.60 O
TER

Atoms:
OP1: (4.779,93.680,111.251)
OP2: (3.402,92.253,109.597)
C3': (0.302,95.482,111.988)
C1': (-0.828,96.320,110.123)
C5': (2.641,95.785,110.918)
O6: (-3.214,91.719,107.128)
O4': (0.554,96.583,109.947)
C8: (-0.261,94.057,109.154)
C2: (-4.453,94.844,108.256)
C6: (-3.199,92.832,107.663)
C5: (-2.121,93.486,108.300)
C4: (-2.328,94.736,108.838)
P: (3.836,93.590,110.099)
C4': (1.262,96.350,111.193)
C2': (-1.034,96.101,111.619)
O2': (-1.232,97.348,112.262)
N1: (-4.351,93.606,107.688)
N2: (-5.653,95.417,108.191)
N3: (-3.456,95.469,108.848)
N7: (-0.812,93.072,108.503)
N9: (-1.127,95.094,109.396)
O5': (2.538,94.448,110.430)
O3': (0.547,95.536,113.382)
C4: (-5.746,93.995,111.807)
N3: (-6.698,94.893,112.239)
OP1: (-8.297,90.867,105.522)
OP2: (-6.528,92.556,106.315)
C2: (-8.034,94.887,111.939)
C1': (-9.872,93.750,110.769)
C3': (-10.421,94.604,108.614)
O5': (-8.869,92.783,107.081)
O4': (-10.046,92.652,109.882)
C5': (-10.181,92.323,107.474)
P: (-7.750,91.758,106.588)
C4': (-10.686,93.108,108.664)
C2': (-10.448,95.004,110.087)
O2': (-11.755,95.287,110.544)
N1: (-8.446,93.841,111.127)
O4: (-4.564,94.193,112.079)
O2: (-8.787,95.746,112.351)
C6: (-7.542,92.907,110.670)
C5: (-6.244,92.950,110.974)
O3': (-11.419,95.292,107.859)
Image (generated by PyMOL):
PyMOL image
show in jmol