Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:0556:0577
Extra
PDB:
ATOM 1 O3' U A 555 4.116 92.621 107.638 1.00 38.56 O
ATOM 2 P G A 556 3.566 92.005 109.015 1.00 37.41 P
ATOM 3 OP1 G A 556 4.524 92.335 110.095 1.00 36.13 O
ATOM 4 OP2 G A 556 3.221 90.579 108.748 1.00 34.66 O
ATOM 5 O5' G A 556 2.235 92.838 109.275 1.00 37.41 O
ATOM 6 C5' G A 556 2.291 94.177 109.793 1.00 38.20 C
ATOM 7 C4' G A 556 0.894 94.700 110.037 1.00 40.44 C
ATOM 8 O4' G A 556 0.200 94.857 108.767 1.00 40.03 O
ATOM 9 C3' G A 556 -0.032 93.794 110.838 1.00 41.74 C
ATOM 10 O3' G A 556 0.214 93.845 112.239 1.00 43.79 O
ATOM 11 C2' G A 556 -1.400 94.327 110.431 1.00 40.88 C
ATOM 12 O2' G A 556 -1.700 95.573 111.036 1.00 39.76 O
ATOM 13 C1' G A 556 -1.180 94.550 108.935 1.00 39.40 C
ATOM 14 N9 G A 556 -1.475 93.357 108.144 1.00 39.23 N
ATOM 15 C8 G A 556 -0.594 92.358 107.798 1.00 38.70 C
ATOM 16 N7 G A 556 -1.137 91.426 107.064 1.00 39.06 N
ATOM 17 C5 G A 556 -2.459 91.826 106.920 1.00 38.97 C
ATOM 18 C6 G A 556 -3.531 91.214 106.220 1.00 39.69 C
ATOM 19 O6 G A 556 -3.522 90.166 105.559 1.00 41.30 O
ATOM 20 N1 G A 556 -4.706 91.951 106.338 1.00 38.74 N
ATOM 21 C2 G A 556 -4.831 93.126 107.033 1.00 39.71 C
ATOM 22 N2 G A 556 -6.042 93.691 107.023 1.00 41.74 N
ATOM 23 N3 G A 556 -3.840 93.709 107.686 1.00 40.37 N
ATOM 24 C4 G A 556 -2.689 93.010 107.587 1.00 39.55 C
ATOM 25 P A A 557 -0.238 92.616 113.176 1.00 45.81 P
ATOM 26 OP1 A A 557 0.413 92.839 114.489 1.00 46.30 O
ATOM 27 OP2 A A 557 -0.052 91.317 112.488 1.00 42.47 O
ATOM 28 O5' A A 557 -1.802 92.860 113.336 1.00 46.79 O
TER
ATOM 1 O3' G B 576 -8.038 89.264 106.482 1.00 61.11 O
ATOM 2 P U B 577 -8.465 90.144 105.202 1.00 61.14 P
ATOM 3 OP1 U B 577 -9.131 89.263 104.204 1.00 60.45 O
ATOM 4 OP2 U B 577 -7.289 90.953 104.792 1.00 62.87 O
ATOM 5 O5' U B 577 -9.533 91.160 105.812 1.00 60.94 O
ATOM 6 C5' U B 577 -10.818 90.700 106.308 1.00 58.56 C
ATOM 7 C4' U B 577 -11.239 91.506 107.522 1.00 57.14 C
ATOM 8 O4' U B 577 -10.520 91.060 108.699 1.00 56.76 O
ATOM 9 C3' U B 577 -10.951 92.997 107.455 1.00 57.54 C
ATOM 10 O3' U B 577 -11.942 93.688 106.698 1.00 59.40 O
ATOM 11 C2' U B 577 -10.927 93.406 108.926 1.00 56.57 C
ATOM 12 O2' U B 577 -12.197 93.658 109.481 1.00 57.72 O
ATOM 13 C1' U B 577 -10.346 92.154 109.590 1.00 56.67 C
ATOM 14 N1 U B 577 -8.931 92.238 110.000 1.00 56.12 N
ATOM 15 C2 U B 577 -8.593 93.168 110.979 1.00 55.93 C
ATOM 16 O2 U B 577 -9.405 93.921 111.496 1.00 54.77 O
ATOM 17 N3 U B 577 -7.264 93.183 111.329 1.00 56.41 N
ATOM 18 C4 U B 577 -6.254 92.387 110.818 1.00 57.42 C
ATOM 19 O4 U B 577 -5.101 92.536 111.229 1.00 56.43 O
ATOM 20 C5 U B 577 -6.676 91.456 109.814 1.00 56.32 C
ATOM 21 C6 U B 577 -7.965 91.416 109.445 1.00 56.98 C
ATOM 22 P A B 578 -11.565 95.066 105.960 1.00 61.31 P
ATOM 23 OP1 A B 578 -12.780 95.545 105.255 1.00 61.81 O
ATOM 24 OP2 A B 578 -10.311 94.862 105.191 1.00 62.16 O
ATOM 25 O5' A B 578 -11.252 96.062 107.161 1.00 58.39 O
TER
ATOM 2 P G A 556 3.566 92.005 109.015 1.00 37.41 P
ATOM 3 OP1 G A 556 4.524 92.335 110.095 1.00 36.13 O
ATOM 4 OP2 G A 556 3.221 90.579 108.748 1.00 34.66 O
ATOM 5 O5' G A 556 2.235 92.838 109.275 1.00 37.41 O
ATOM 6 C5' G A 556 2.291 94.177 109.793 1.00 38.20 C
ATOM 7 C4' G A 556 0.894 94.700 110.037 1.00 40.44 C
ATOM 8 O4' G A 556 0.200 94.857 108.767 1.00 40.03 O
ATOM 9 C3' G A 556 -0.032 93.794 110.838 1.00 41.74 C
ATOM 10 O3' G A 556 0.214 93.845 112.239 1.00 43.79 O
ATOM 11 C2' G A 556 -1.400 94.327 110.431 1.00 40.88 C
ATOM 12 O2' G A 556 -1.700 95.573 111.036 1.00 39.76 O
ATOM 13 C1' G A 556 -1.180 94.550 108.935 1.00 39.40 C
ATOM 14 N9 G A 556 -1.475 93.357 108.144 1.00 39.23 N
ATOM 15 C8 G A 556 -0.594 92.358 107.798 1.00 38.70 C
ATOM 16 N7 G A 556 -1.137 91.426 107.064 1.00 39.06 N
ATOM 17 C5 G A 556 -2.459 91.826 106.920 1.00 38.97 C
ATOM 18 C6 G A 556 -3.531 91.214 106.220 1.00 39.69 C
ATOM 19 O6 G A 556 -3.522 90.166 105.559 1.00 41.30 O
ATOM 20 N1 G A 556 -4.706 91.951 106.338 1.00 38.74 N
ATOM 21 C2 G A 556 -4.831 93.126 107.033 1.00 39.71 C
ATOM 22 N2 G A 556 -6.042 93.691 107.023 1.00 41.74 N
ATOM 23 N3 G A 556 -3.840 93.709 107.686 1.00 40.37 N
ATOM 24 C4 G A 556 -2.689 93.010 107.587 1.00 39.55 C
ATOM 25 P A A 557 -0.238 92.616 113.176 1.00 45.81 P
ATOM 26 OP1 A A 557 0.413 92.839 114.489 1.00 46.30 O
ATOM 27 OP2 A A 557 -0.052 91.317 112.488 1.00 42.47 O
ATOM 28 O5' A A 557 -1.802 92.860 113.336 1.00 46.79 O
TER
ATOM 1 O3' G B 576 -8.038 89.264 106.482 1.00 61.11 O
ATOM 2 P U B 577 -8.465 90.144 105.202 1.00 61.14 P
ATOM 3 OP1 U B 577 -9.131 89.263 104.204 1.00 60.45 O
ATOM 4 OP2 U B 577 -7.289 90.953 104.792 1.00 62.87 O
ATOM 5 O5' U B 577 -9.533 91.160 105.812 1.00 60.94 O
ATOM 6 C5' U B 577 -10.818 90.700 106.308 1.00 58.56 C
ATOM 7 C4' U B 577 -11.239 91.506 107.522 1.00 57.14 C
ATOM 8 O4' U B 577 -10.520 91.060 108.699 1.00 56.76 O
ATOM 9 C3' U B 577 -10.951 92.997 107.455 1.00 57.54 C
ATOM 10 O3' U B 577 -11.942 93.688 106.698 1.00 59.40 O
ATOM 11 C2' U B 577 -10.927 93.406 108.926 1.00 56.57 C
ATOM 12 O2' U B 577 -12.197 93.658 109.481 1.00 57.72 O
ATOM 13 C1' U B 577 -10.346 92.154 109.590 1.00 56.67 C
ATOM 14 N1 U B 577 -8.931 92.238 110.000 1.00 56.12 N
ATOM 15 C2 U B 577 -8.593 93.168 110.979 1.00 55.93 C
ATOM 16 O2 U B 577 -9.405 93.921 111.496 1.00 54.77 O
ATOM 17 N3 U B 577 -7.264 93.183 111.329 1.00 56.41 N
ATOM 18 C4 U B 577 -6.254 92.387 110.818 1.00 57.42 C
ATOM 19 O4 U B 577 -5.101 92.536 111.229 1.00 56.43 O
ATOM 20 C5 U B 577 -6.676 91.456 109.814 1.00 56.32 C
ATOM 21 C6 U B 577 -7.965 91.416 109.445 1.00 56.98 C
ATOM 22 P A B 578 -11.565 95.066 105.960 1.00 61.31 P
ATOM 23 OP1 A B 578 -12.780 95.545 105.255 1.00 61.81 O
ATOM 24 OP2 A B 578 -10.311 94.862 105.191 1.00 62.16 O
ATOM 25 O5' A B 578 -11.252 96.062 107.161 1.00 58.39 O
TER
Atoms:
OP1: (4.524,92.335,110.095)
OP2: (3.221,90.579,108.748)
C3': (-0.032,93.794,110.838)
C1': (-1.180,94.550,108.935)
C5': (2.291,94.177,109.793)
O6: (-3.522,90.166,105.559)
O4': (0.200,94.857,108.767)
C8: (-0.594,92.358,107.798)
C2: (-4.831,93.126,107.033)
C6: (-3.531,91.214,106.220)
C5: (-2.459,91.826,106.920)
C4: (-2.689,93.010,107.587)
P: (3.566,92.005,109.015)
C4': (0.894,94.700,110.037)
C2': (-1.400,94.327,110.431)
O2': (-1.700,95.573,111.036)
N1: (-4.706,91.951,106.338)
N2: (-6.042,93.691,107.023)
N3: (-3.840,93.709,107.686)
N7: (-1.137,91.426,107.064)
N9: (-1.475,93.357,108.144)
O5': (2.235,92.838,109.275)
O3': (0.214,93.845,112.239)
OP2: (3.221,90.579,108.748)
C3': (-0.032,93.794,110.838)
C1': (-1.180,94.550,108.935)
C5': (2.291,94.177,109.793)
O6: (-3.522,90.166,105.559)
O4': (0.200,94.857,108.767)
C8: (-0.594,92.358,107.798)
C2: (-4.831,93.126,107.033)
C6: (-3.531,91.214,106.220)
C5: (-2.459,91.826,106.920)
C4: (-2.689,93.010,107.587)
P: (3.566,92.005,109.015)
C4': (0.894,94.700,110.037)
C2': (-1.400,94.327,110.431)
O2': (-1.700,95.573,111.036)
N1: (-4.706,91.951,106.338)
N2: (-6.042,93.691,107.023)
N3: (-3.840,93.709,107.686)
N7: (-1.137,91.426,107.064)
N9: (-1.475,93.357,108.144)
O5': (2.235,92.838,109.275)
O3': (0.214,93.845,112.239)
C4: (-6.254,92.387,110.818)
N3: (-7.264,93.183,111.329)
OP1: (-9.131,89.263,104.204)
OP2: (-7.289,90.953,104.792)
C2: (-8.593,93.168,110.979)
C1': (-10.346,92.154,109.590)
C3': (-10.951,92.997,107.455)
O5': (-9.533,91.160,105.812)
O4': (-10.520,91.060,108.699)
C5': (-10.818,90.700,106.308)
P: (-8.465,90.144,105.202)
C4': (-11.239,91.506,107.522)
C2': (-10.927,93.406,108.926)
O2': (-12.197,93.658,109.481)
N1: (-8.931,92.238,110.000)
O4: (-5.101,92.536,111.229)
O2: (-9.405,93.921,111.496)
C6: (-7.965,91.416,109.445)
C5: (-6.676,91.456,109.814)
O3': (-11.942,93.688,106.698)
N3: (-7.264,93.183,111.329)
OP1: (-9.131,89.263,104.204)
OP2: (-7.289,90.953,104.792)
C2: (-8.593,93.168,110.979)
C1': (-10.346,92.154,109.590)
C3': (-10.951,92.997,107.455)
O5': (-9.533,91.160,105.812)
O4': (-10.520,91.060,108.699)
C5': (-10.818,90.700,106.308)
P: (-8.465,90.144,105.202)
C4': (-11.239,91.506,107.522)
C2': (-10.927,93.406,108.926)
O2': (-12.197,93.658,109.481)
N1: (-8.931,92.238,110.000)
O4: (-5.101,92.536,111.229)
O2: (-9.405,93.921,111.496)
C6: (-7.965,91.416,109.445)
C5: (-6.676,91.456,109.814)
O3': (-11.942,93.688,106.698)
Image (generated by PyMOL):