Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1351:A1365
Extra
PDB:
ATOM 1 O3' C A1350 -38.919 -36.169 48.867 1.00 0.01 O
ATOM 2 P G A1351 -40.060 -35.604 49.833 1.00 0.01 P
ATOM 3 OP1 G A1351 -40.538 -36.749 50.641 1.00 0.01 O
ATOM 4 OP2 G A1351 -41.022 -34.854 48.988 1.00 0.01 O
ATOM 5 O5' G A1351 -39.272 -34.592 50.756 1.00 0.01 O
ATOM 6 C5' G A1351 -38.095 -34.985 51.435 1.00 0.01 C
ATOM 7 C4' G A1351 -37.339 -33.786 51.922 1.00 0.01 C
ATOM 8 O4' G A1351 -36.895 -32.992 50.794 1.00 0.01 O
ATOM 9 C3' G A1351 -38.132 -32.817 52.769 1.00 0.01 C
ATOM 10 O3' G A1351 -38.221 -33.250 54.115 1.00 0.01 O
ATOM 11 C2' G A1351 -37.374 -31.502 52.583 1.00 0.01 C
ATOM 12 O2' G A1351 -36.280 -31.411 53.484 1.00 0.01 O
ATOM 13 C1' G A1351 -36.834 -31.636 51.150 1.00 0.01 C
ATOM 14 N9 G A1351 -37.633 -30.887 50.188 1.00 0.01 N
ATOM 15 C8 G A1351 -38.674 -31.457 49.543 1.00 0.01 C
ATOM 16 N7 G A1351 -39.291 -30.647 48.725 1.00 0.01 N
ATOM 17 C5 G A1351 -38.603 -29.457 48.835 1.00 0.01 C
ATOM 18 C6 G A1351 -38.859 -28.218 48.182 1.00 0.01 C
ATOM 19 O6 G A1351 -39.750 -27.967 47.364 1.00 0.01 O
ATOM 20 N1 G A1351 -37.949 -27.252 48.585 1.00 0.01 N
ATOM 21 C2 G A1351 -36.950 -27.473 49.493 1.00 0.01 C
ATOM 22 N2 G A1351 -36.183 -26.411 49.742 1.00 0.01 N
ATOM 23 N3 G A1351 -36.703 -28.623 50.116 1.00 0.01 N
ATOM 24 C4 G A1351 -37.561 -29.590 49.743 1.00 0.01 C
ATOM 25 P A A1352 -38.846 -32.313 55.249 1.00 0.13 P
ATOM 26 OP1 A A1352 -40.250 -32.704 55.404 1.00 0.13 O
ATOM 27 OP2 A A1352 -38.527 -30.933 54.888 1.00 0.13 O
ATOM 28 O5' A A1352 -38.023 -32.729 56.521 1.00 0.13 O
TER
ATOM 1 O3' G B1364 -40.503 -23.506 48.258 1.00 0.01 O
ATOM 2 P U B1365 -38.949 -23.511 47.866 1.00 4.11 P
ATOM 3 OP1 U B1365 -38.726 -22.411 46.901 1.00 4.11 O
ATOM 4 OP2 U B1365 -38.611 -24.883 47.462 1.00 4.11 O
ATOM 5 O5' U B1365 -38.258 -23.168 49.245 1.00 4.11 O
ATOM 6 C5' U B1365 -39.014 -22.587 50.282 1.00 4.11 C
ATOM 7 C4' U B1365 -38.141 -21.867 51.255 1.00 4.11 C
ATOM 8 O4' U B1365 -38.558 -22.185 52.613 1.00 4.11 O
ATOM 9 C3' U B1365 -36.670 -22.242 51.207 1.00 4.11 C
ATOM 10 O3' U B1365 -35.954 -21.503 50.236 1.00 4.11 O
ATOM 11 C2' U B1365 -36.232 -21.977 52.629 1.00 4.11 C
ATOM 12 O2' U B1365 -36.144 -20.578 52.861 1.00 4.11 O
ATOM 13 C1' U B1365 -37.435 -22.517 53.386 1.00 4.11 C
ATOM 14 N1 U B1365 -37.387 -23.994 53.485 1.00 4.48 N
ATOM 15 C2 U B1365 -36.568 -24.624 54.402 1.00 4.48 C
ATOM 16 O2 U B1365 -35.869 -23.996 55.178 1.00 4.48 O
ATOM 17 N3 U B1365 -36.613 -26.011 54.355 1.00 4.48 N
ATOM 18 C4 U B1365 -37.371 -26.782 53.486 1.00 4.48 C
ATOM 19 O4 U B1365 -37.341 -27.988 53.539 1.00 4.48 O
ATOM 20 C5 U B1365 -38.177 -26.080 52.561 1.00 4.48 C
ATOM 21 C6 U B1365 -38.152 -24.744 52.602 1.00 4.48 C
ATOM 22 P A B1366 -34.355 -21.599 50.157 1.00 0.01 P
ATOM 23 OP1 A B1366 -33.855 -20.250 49.852 1.00 0.01 O
ATOM 24 OP2 A B1366 -34.031 -22.698 49.237 1.00 0.01 O
ATOM 25 O5' A B1366 -33.964 -22.003 51.629 1.00 0.01 O
TER
ATOM 2 P G A1351 -40.060 -35.604 49.833 1.00 0.01 P
ATOM 3 OP1 G A1351 -40.538 -36.749 50.641 1.00 0.01 O
ATOM 4 OP2 G A1351 -41.022 -34.854 48.988 1.00 0.01 O
ATOM 5 O5' G A1351 -39.272 -34.592 50.756 1.00 0.01 O
ATOM 6 C5' G A1351 -38.095 -34.985 51.435 1.00 0.01 C
ATOM 7 C4' G A1351 -37.339 -33.786 51.922 1.00 0.01 C
ATOM 8 O4' G A1351 -36.895 -32.992 50.794 1.00 0.01 O
ATOM 9 C3' G A1351 -38.132 -32.817 52.769 1.00 0.01 C
ATOM 10 O3' G A1351 -38.221 -33.250 54.115 1.00 0.01 O
ATOM 11 C2' G A1351 -37.374 -31.502 52.583 1.00 0.01 C
ATOM 12 O2' G A1351 -36.280 -31.411 53.484 1.00 0.01 O
ATOM 13 C1' G A1351 -36.834 -31.636 51.150 1.00 0.01 C
ATOM 14 N9 G A1351 -37.633 -30.887 50.188 1.00 0.01 N
ATOM 15 C8 G A1351 -38.674 -31.457 49.543 1.00 0.01 C
ATOM 16 N7 G A1351 -39.291 -30.647 48.725 1.00 0.01 N
ATOM 17 C5 G A1351 -38.603 -29.457 48.835 1.00 0.01 C
ATOM 18 C6 G A1351 -38.859 -28.218 48.182 1.00 0.01 C
ATOM 19 O6 G A1351 -39.750 -27.967 47.364 1.00 0.01 O
ATOM 20 N1 G A1351 -37.949 -27.252 48.585 1.00 0.01 N
ATOM 21 C2 G A1351 -36.950 -27.473 49.493 1.00 0.01 C
ATOM 22 N2 G A1351 -36.183 -26.411 49.742 1.00 0.01 N
ATOM 23 N3 G A1351 -36.703 -28.623 50.116 1.00 0.01 N
ATOM 24 C4 G A1351 -37.561 -29.590 49.743 1.00 0.01 C
ATOM 25 P A A1352 -38.846 -32.313 55.249 1.00 0.13 P
ATOM 26 OP1 A A1352 -40.250 -32.704 55.404 1.00 0.13 O
ATOM 27 OP2 A A1352 -38.527 -30.933 54.888 1.00 0.13 O
ATOM 28 O5' A A1352 -38.023 -32.729 56.521 1.00 0.13 O
TER
ATOM 1 O3' G B1364 -40.503 -23.506 48.258 1.00 0.01 O
ATOM 2 P U B1365 -38.949 -23.511 47.866 1.00 4.11 P
ATOM 3 OP1 U B1365 -38.726 -22.411 46.901 1.00 4.11 O
ATOM 4 OP2 U B1365 -38.611 -24.883 47.462 1.00 4.11 O
ATOM 5 O5' U B1365 -38.258 -23.168 49.245 1.00 4.11 O
ATOM 6 C5' U B1365 -39.014 -22.587 50.282 1.00 4.11 C
ATOM 7 C4' U B1365 -38.141 -21.867 51.255 1.00 4.11 C
ATOM 8 O4' U B1365 -38.558 -22.185 52.613 1.00 4.11 O
ATOM 9 C3' U B1365 -36.670 -22.242 51.207 1.00 4.11 C
ATOM 10 O3' U B1365 -35.954 -21.503 50.236 1.00 4.11 O
ATOM 11 C2' U B1365 -36.232 -21.977 52.629 1.00 4.11 C
ATOM 12 O2' U B1365 -36.144 -20.578 52.861 1.00 4.11 O
ATOM 13 C1' U B1365 -37.435 -22.517 53.386 1.00 4.11 C
ATOM 14 N1 U B1365 -37.387 -23.994 53.485 1.00 4.48 N
ATOM 15 C2 U B1365 -36.568 -24.624 54.402 1.00 4.48 C
ATOM 16 O2 U B1365 -35.869 -23.996 55.178 1.00 4.48 O
ATOM 17 N3 U B1365 -36.613 -26.011 54.355 1.00 4.48 N
ATOM 18 C4 U B1365 -37.371 -26.782 53.486 1.00 4.48 C
ATOM 19 O4 U B1365 -37.341 -27.988 53.539 1.00 4.48 O
ATOM 20 C5 U B1365 -38.177 -26.080 52.561 1.00 4.48 C
ATOM 21 C6 U B1365 -38.152 -24.744 52.602 1.00 4.48 C
ATOM 22 P A B1366 -34.355 -21.599 50.157 1.00 0.01 P
ATOM 23 OP1 A B1366 -33.855 -20.250 49.852 1.00 0.01 O
ATOM 24 OP2 A B1366 -34.031 -22.698 49.237 1.00 0.01 O
ATOM 25 O5' A B1366 -33.964 -22.003 51.629 1.00 0.01 O
TER
Atoms:
OP1: (-40.538,-36.749,50.641)
OP2: (-41.022,-34.854,48.988)
C3': (-38.132,-32.817,52.769)
C1': (-36.834,-31.636,51.150)
C5': (-38.095,-34.985,51.435)
O6: (-39.750,-27.967,47.364)
O4': (-36.895,-32.992,50.794)
C8: (-38.674,-31.457,49.543)
C2: (-36.950,-27.473,49.493)
C6: (-38.859,-28.218,48.182)
C5: (-38.603,-29.457,48.835)
C4: (-37.561,-29.590,49.743)
P: (-40.060,-35.604,49.833)
C4': (-37.339,-33.786,51.922)
C2': (-37.374,-31.502,52.583)
O2': (-36.280,-31.411,53.484)
N1: (-37.949,-27.252,48.585)
N2: (-36.183,-26.411,49.742)
N3: (-36.703,-28.623,50.116)
N7: (-39.291,-30.647,48.725)
N9: (-37.633,-30.887,50.188)
O5': (-39.272,-34.592,50.756)
O3': (-38.221,-33.250,54.115)
OP2: (-41.022,-34.854,48.988)
C3': (-38.132,-32.817,52.769)
C1': (-36.834,-31.636,51.150)
C5': (-38.095,-34.985,51.435)
O6: (-39.750,-27.967,47.364)
O4': (-36.895,-32.992,50.794)
C8: (-38.674,-31.457,49.543)
C2: (-36.950,-27.473,49.493)
C6: (-38.859,-28.218,48.182)
C5: (-38.603,-29.457,48.835)
C4: (-37.561,-29.590,49.743)
P: (-40.060,-35.604,49.833)
C4': (-37.339,-33.786,51.922)
C2': (-37.374,-31.502,52.583)
O2': (-36.280,-31.411,53.484)
N1: (-37.949,-27.252,48.585)
N2: (-36.183,-26.411,49.742)
N3: (-36.703,-28.623,50.116)
N7: (-39.291,-30.647,48.725)
N9: (-37.633,-30.887,50.188)
O5': (-39.272,-34.592,50.756)
O3': (-38.221,-33.250,54.115)
C4: (-37.371,-26.782,53.486)
N3: (-36.613,-26.011,54.355)
OP1: (-38.726,-22.411,46.901)
OP2: (-38.611,-24.883,47.462)
C2: (-36.568,-24.624,54.402)
C1': (-37.435,-22.517,53.386)
C3': (-36.670,-22.242,51.207)
O5': (-38.258,-23.168,49.245)
O4': (-38.558,-22.185,52.613)
C5': (-39.014,-22.587,50.282)
P: (-38.949,-23.511,47.866)
C4': (-38.141,-21.867,51.255)
C2': (-36.232,-21.977,52.629)
O2': (-36.144,-20.578,52.861)
N1: (-37.387,-23.994,53.485)
O4: (-37.341,-27.988,53.539)
O2: (-35.869,-23.996,55.178)
C6: (-38.152,-24.744,52.602)
C5: (-38.177,-26.080,52.561)
O3': (-35.954,-21.503,50.236)
N3: (-36.613,-26.011,54.355)
OP1: (-38.726,-22.411,46.901)
OP2: (-38.611,-24.883,47.462)
C2: (-36.568,-24.624,54.402)
C1': (-37.435,-22.517,53.386)
C3': (-36.670,-22.242,51.207)
O5': (-38.258,-23.168,49.245)
O4': (-38.558,-22.185,52.613)
C5': (-39.014,-22.587,50.282)
P: (-38.949,-23.511,47.866)
C4': (-38.141,-21.867,51.255)
C2': (-36.232,-21.977,52.629)
O2': (-36.144,-20.578,52.861)
N1: (-37.387,-23.994,53.485)
O4: (-37.341,-27.988,53.539)
O2: (-35.869,-23.996,55.178)
C6: (-38.152,-24.744,52.602)
C5: (-38.177,-26.080,52.561)
O3': (-35.954,-21.503,50.236)
Image (generated by PyMOL):