Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CD6:0280:0347
Extra
PDB:
ATOM 1 O3' C A 279 55.310 128.884 -1.623 1.00 76.35 O
ATOM 2 P G A 280 54.672 129.680 -0.383 1.00 76.15 P
ATOM 3 OP1 G A 280 53.666 130.629 -0.920 1.00 76.54 O
ATOM 4 OP2 G A 280 55.796 130.189 0.443 1.00 76.54 O
ATOM 5 O5' G A 280 53.877 128.570 0.437 1.00 75.51 O
ATOM 6 C5' G A 280 52.678 127.973 -0.093 1.00 73.14 C
ATOM 7 C4' G A 280 52.288 126.765 0.729 1.00 73.11 C
ATOM 8 O4' G A 280 53.332 125.754 0.649 1.00 73.08 O
ATOM 9 C3' G A 280 52.137 127.017 2.218 1.00 72.51 C
ATOM 10 O3' G A 280 50.876 127.591 2.537 1.00 73.67 O
ATOM 11 C2' G A 280 52.345 125.626 2.802 1.00 71.42 C
ATOM 12 O2' G A 280 51.213 124.790 2.680 1.00 69.74 O
ATOM 13 C1' G A 280 53.466 125.099 1.903 1.00 70.80 C
ATOM 14 N9 G A 280 54.785 125.419 2.443 1.00 69.41 N
ATOM 15 C8 G A 280 55.501 126.577 2.248 1.00 68.26 C
ATOM 16 N7 G A 280 56.636 126.593 2.892 1.00 68.24 N
ATOM 17 C5 G A 280 56.678 125.369 3.548 1.00 67.79 C
ATOM 18 C6 G A 280 57.663 124.822 4.418 1.00 67.20 C
ATOM 19 O6 G A 280 58.721 125.331 4.801 1.00 65.90 O
ATOM 20 N1 G A 280 57.308 123.552 4.857 1.00 67.10 N
ATOM 21 C2 G A 280 56.152 122.895 4.518 1.00 67.72 C
ATOM 22 N2 G A 280 55.988 121.677 5.053 1.00 68.34 N
ATOM 23 N3 G A 280 55.223 123.394 3.717 1.00 67.51 N
ATOM 24 C4 G A 280 55.549 124.626 3.272 1.00 68.15 C
ATOM 25 P A A 281 50.682 128.340 3.944 1.00 73.97 P
ATOM 26 OP1 A A 281 49.387 129.074 3.895 1.00 72.88 O
ATOM 27 OP2 A A 281 51.934 129.086 4.233 1.00 73.61 O
ATOM 28 O5' A A 281 50.563 127.133 4.979 1.00 73.90 O
TER
ATOM 1 O3' G B 346 58.689 123.362 8.789 1.00 78.79 O
ATOM 2 P U B 347 59.635 122.291 8.045 1.00 79.30 P
ATOM 3 OP1 U B 347 60.937 122.215 8.763 1.00 78.93 O
ATOM 4 OP2 U B 347 59.616 122.592 6.588 1.00 80.75 O
ATOM 5 O5' U B 347 58.860 120.913 8.240 1.00 78.40 O
ATOM 6 C5' U B 347 58.955 120.170 9.471 1.00 77.75 C
ATOM 7 C4' U B 347 57.614 119.568 9.827 1.00 77.20 C
ATOM 8 O4' U B 347 56.664 120.622 10.125 1.00 76.44 O
ATOM 9 C3' U B 347 56.930 118.766 8.734 1.00 76.99 C
ATOM 10 O3' U B 347 57.458 117.446 8.677 1.00 78.94 O
ATOM 11 C2' U B 347 55.472 118.786 9.177 1.00 75.95 C
ATOM 12 O2' U B 347 55.183 117.836 10.182 1.00 74.93 O
ATOM 13 C1' U B 347 55.357 120.186 9.789 1.00 75.02 C
ATOM 14 N1 U B 347 54.705 121.206 8.949 1.00 73.27 N
ATOM 15 C2 U B 347 53.349 121.060 8.695 1.00 72.52 C
ATOM 16 O2 U B 347 52.687 120.118 9.109 1.00 72.33 O
ATOM 17 N3 U B 347 52.793 122.060 7.937 1.00 71.80 N
ATOM 18 C4 U B 347 53.431 123.163 7.420 1.00 71.69 C
ATOM 19 O4 U B 347 52.778 123.998 6.793 1.00 72.36 O
ATOM 20 C5 U B 347 54.827 123.237 7.711 1.00 72.17 C
ATOM 21 C6 U B 347 55.403 122.279 8.442 1.00 72.64 C
ATOM 22 P A B 348 57.546 116.679 7.267 1.00 81.29 P
ATOM 23 OP1 A B 348 58.175 115.355 7.546 1.00 80.58 O
ATOM 24 OP2 A B 348 58.168 117.588 6.265 1.00 80.29 O
ATOM 25 O5' A B 348 56.019 116.452 6.865 1.00 79.65 O
TER
ATOM 2 P G A 280 54.672 129.680 -0.383 1.00 76.15 P
ATOM 3 OP1 G A 280 53.666 130.629 -0.920 1.00 76.54 O
ATOM 4 OP2 G A 280 55.796 130.189 0.443 1.00 76.54 O
ATOM 5 O5' G A 280 53.877 128.570 0.437 1.00 75.51 O
ATOM 6 C5' G A 280 52.678 127.973 -0.093 1.00 73.14 C
ATOM 7 C4' G A 280 52.288 126.765 0.729 1.00 73.11 C
ATOM 8 O4' G A 280 53.332 125.754 0.649 1.00 73.08 O
ATOM 9 C3' G A 280 52.137 127.017 2.218 1.00 72.51 C
ATOM 10 O3' G A 280 50.876 127.591 2.537 1.00 73.67 O
ATOM 11 C2' G A 280 52.345 125.626 2.802 1.00 71.42 C
ATOM 12 O2' G A 280 51.213 124.790 2.680 1.00 69.74 O
ATOM 13 C1' G A 280 53.466 125.099 1.903 1.00 70.80 C
ATOM 14 N9 G A 280 54.785 125.419 2.443 1.00 69.41 N
ATOM 15 C8 G A 280 55.501 126.577 2.248 1.00 68.26 C
ATOM 16 N7 G A 280 56.636 126.593 2.892 1.00 68.24 N
ATOM 17 C5 G A 280 56.678 125.369 3.548 1.00 67.79 C
ATOM 18 C6 G A 280 57.663 124.822 4.418 1.00 67.20 C
ATOM 19 O6 G A 280 58.721 125.331 4.801 1.00 65.90 O
ATOM 20 N1 G A 280 57.308 123.552 4.857 1.00 67.10 N
ATOM 21 C2 G A 280 56.152 122.895 4.518 1.00 67.72 C
ATOM 22 N2 G A 280 55.988 121.677 5.053 1.00 68.34 N
ATOM 23 N3 G A 280 55.223 123.394 3.717 1.00 67.51 N
ATOM 24 C4 G A 280 55.549 124.626 3.272 1.00 68.15 C
ATOM 25 P A A 281 50.682 128.340 3.944 1.00 73.97 P
ATOM 26 OP1 A A 281 49.387 129.074 3.895 1.00 72.88 O
ATOM 27 OP2 A A 281 51.934 129.086 4.233 1.00 73.61 O
ATOM 28 O5' A A 281 50.563 127.133 4.979 1.00 73.90 O
TER
ATOM 1 O3' G B 346 58.689 123.362 8.789 1.00 78.79 O
ATOM 2 P U B 347 59.635 122.291 8.045 1.00 79.30 P
ATOM 3 OP1 U B 347 60.937 122.215 8.763 1.00 78.93 O
ATOM 4 OP2 U B 347 59.616 122.592 6.588 1.00 80.75 O
ATOM 5 O5' U B 347 58.860 120.913 8.240 1.00 78.40 O
ATOM 6 C5' U B 347 58.955 120.170 9.471 1.00 77.75 C
ATOM 7 C4' U B 347 57.614 119.568 9.827 1.00 77.20 C
ATOM 8 O4' U B 347 56.664 120.622 10.125 1.00 76.44 O
ATOM 9 C3' U B 347 56.930 118.766 8.734 1.00 76.99 C
ATOM 10 O3' U B 347 57.458 117.446 8.677 1.00 78.94 O
ATOM 11 C2' U B 347 55.472 118.786 9.177 1.00 75.95 C
ATOM 12 O2' U B 347 55.183 117.836 10.182 1.00 74.93 O
ATOM 13 C1' U B 347 55.357 120.186 9.789 1.00 75.02 C
ATOM 14 N1 U B 347 54.705 121.206 8.949 1.00 73.27 N
ATOM 15 C2 U B 347 53.349 121.060 8.695 1.00 72.52 C
ATOM 16 O2 U B 347 52.687 120.118 9.109 1.00 72.33 O
ATOM 17 N3 U B 347 52.793 122.060 7.937 1.00 71.80 N
ATOM 18 C4 U B 347 53.431 123.163 7.420 1.00 71.69 C
ATOM 19 O4 U B 347 52.778 123.998 6.793 1.00 72.36 O
ATOM 20 C5 U B 347 54.827 123.237 7.711 1.00 72.17 C
ATOM 21 C6 U B 347 55.403 122.279 8.442 1.00 72.64 C
ATOM 22 P A B 348 57.546 116.679 7.267 1.00 81.29 P
ATOM 23 OP1 A B 348 58.175 115.355 7.546 1.00 80.58 O
ATOM 24 OP2 A B 348 58.168 117.588 6.265 1.00 80.29 O
ATOM 25 O5' A B 348 56.019 116.452 6.865 1.00 79.65 O
TER
Atoms:
OP1: (53.666,130.629,-0.920)
OP2: (55.796,130.189,0.443)
C3': (52.137,127.017,2.218)
C1': (53.466,125.099,1.903)
C5': (52.678,127.973,-0.093)
O6: (58.721,125.331,4.801)
O4': (53.332,125.754,0.649)
C8: (55.501,126.577,2.248)
C2: (56.152,122.895,4.518)
C6: (57.663,124.822,4.418)
C5: (56.678,125.369,3.548)
C4: (55.549,124.626,3.272)
P: (54.672,129.680,-0.383)
C4': (52.288,126.765,0.729)
C2': (52.345,125.626,2.802)
O2': (51.213,124.790,2.680)
N1: (57.308,123.552,4.857)
N2: (55.988,121.677,5.053)
N3: (55.223,123.394,3.717)
N7: (56.636,126.593,2.892)
N9: (54.785,125.419,2.443)
O5': (53.877,128.570,0.437)
O3': (50.876,127.591,2.537)
OP2: (55.796,130.189,0.443)
C3': (52.137,127.017,2.218)
C1': (53.466,125.099,1.903)
C5': (52.678,127.973,-0.093)
O6: (58.721,125.331,4.801)
O4': (53.332,125.754,0.649)
C8: (55.501,126.577,2.248)
C2: (56.152,122.895,4.518)
C6: (57.663,124.822,4.418)
C5: (56.678,125.369,3.548)
C4: (55.549,124.626,3.272)
P: (54.672,129.680,-0.383)
C4': (52.288,126.765,0.729)
C2': (52.345,125.626,2.802)
O2': (51.213,124.790,2.680)
N1: (57.308,123.552,4.857)
N2: (55.988,121.677,5.053)
N3: (55.223,123.394,3.717)
N7: (56.636,126.593,2.892)
N9: (54.785,125.419,2.443)
O5': (53.877,128.570,0.437)
O3': (50.876,127.591,2.537)
C4: (53.431,123.163,7.420)
N3: (52.793,122.060,7.937)
OP1: (60.937,122.215,8.763)
OP2: (59.616,122.592,6.588)
C2: (53.349,121.060,8.695)
C1': (55.357,120.186,9.789)
C3': (56.930,118.766,8.734)
O5': (58.860,120.913,8.240)
O4': (56.664,120.622,10.125)
C5': (58.955,120.170,9.471)
P: (59.635,122.291,8.045)
C4': (57.614,119.568,9.827)
C2': (55.472,118.786,9.177)
O2': (55.183,117.836,10.182)
N1: (54.705,121.206,8.949)
O4: (52.778,123.998,6.793)
O2: (52.687,120.118,9.109)
C6: (55.403,122.279,8.442)
C5: (54.827,123.237,7.711)
O3': (57.458,117.446,8.677)
N3: (52.793,122.060,7.937)
OP1: (60.937,122.215,8.763)
OP2: (59.616,122.592,6.588)
C2: (53.349,121.060,8.695)
C1': (55.357,120.186,9.789)
C3': (56.930,118.766,8.734)
O5': (58.860,120.913,8.240)
O4': (56.664,120.622,10.125)
C5': (58.955,120.170,9.471)
P: (59.635,122.291,8.045)
C4': (57.614,119.568,9.827)
C2': (55.472,118.786,9.177)
O2': (55.183,117.836,10.182)
N1: (54.705,121.206,8.949)
O4: (52.778,123.998,6.793)
O2: (52.687,120.118,9.109)
C6: (55.403,122.279,8.442)
C5: (54.827,123.237,7.711)
O3': (57.458,117.446,8.677)
Image (generated by PyMOL):