Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0556:0577
Extra
PDB:
ATOM 1 O3' U A 555 3.915 93.130 107.545 1.00 58.27 O
ATOM 2 P G A 556 3.411 92.502 108.939 1.00 57.02 P
ATOM 3 OP1 G A 556 4.418 92.874 109.968 1.00 57.98 O
ATOM 4 OP2 G A 556 3.090 91.066 108.716 1.00 54.67 O
ATOM 5 O5' G A 556 2.077 93.314 109.251 1.00 57.74 O
ATOM 6 C5' G A 556 2.127 94.700 109.641 1.00 59.01 C
ATOM 7 C4' G A 556 0.733 95.217 109.921 1.00 62.46 C
ATOM 8 O4' G A 556 -0.006 95.385 108.679 1.00 62.50 O
ATOM 9 C3' G A 556 -0.161 94.295 110.735 1.00 63.95 C
ATOM 10 O3' G A 556 0.112 94.308 112.127 1.00 65.70 O
ATOM 11 C2' G A 556 -1.545 94.821 110.396 1.00 63.22 C
ATOM 12 O2' G A 556 -1.851 96.021 111.081 1.00 62.21 O
ATOM 13 C1' G A 556 -1.381 95.097 108.902 1.00 61.66 C
ATOM 14 N9 G A 556 -1.744 93.932 108.099 1.00 60.72 N
ATOM 15 C8 G A 556 -0.929 92.892 107.714 1.00 59.44 C
ATOM 16 N7 G A 556 -1.544 92.005 106.979 1.00 58.62 N
ATOM 17 C5 G A 556 -2.843 92.484 106.877 1.00 58.63 C
ATOM 18 C6 G A 556 -3.967 91.954 106.194 1.00 58.50 C
ATOM 19 O6 G A 556 -4.039 90.925 105.506 1.00 57.70 O
ATOM 20 N1 G A 556 -5.092 92.757 106.361 1.00 57.51 N
ATOM 21 C2 G A 556 -5.130 93.922 107.089 1.00 59.70 C
ATOM 22 N2 G A 556 -6.311 94.555 107.143 1.00 60.31 N
ATOM 23 N3 G A 556 -4.087 94.430 107.722 1.00 59.96 N
ATOM 24 C4 G A 556 -2.985 93.666 107.573 1.00 60.36 C
ATOM 25 P A A 557 -0.442 93.113 113.043 1.00 66.35 P
ATOM 26 OP1 A A 557 0.235 93.251 114.357 1.00 67.06 O
ATOM 27 OP2 A A 557 -0.349 91.825 112.298 1.00 63.43 O
ATOM 28 O5' A A 557 -1.985 93.478 113.202 1.00 66.31 O
TER
ATOM 1 O3' G B 576 -8.336 90.037 106.548 1.00 82.03 O
ATOM 2 P U B 577 -8.710 90.931 105.261 1.00 82.76 P
ATOM 3 OP1 U B 577 -9.297 90.056 104.206 1.00 80.31 O
ATOM 4 OP2 U B 577 -7.531 91.773 104.941 1.00 83.05 O
ATOM 5 O5' U B 577 -9.824 91.928 105.824 1.00 82.41 O
ATOM 6 C5' U B 577 -11.085 91.441 106.358 1.00 80.22 C
ATOM 7 C4' U B 577 -11.491 92.257 107.567 1.00 77.95 C
ATOM 8 O4' U B 577 -10.775 91.802 108.742 1.00 76.75 O
ATOM 9 C3' U B 577 -11.165 93.738 107.473 1.00 78.72 C
ATOM 10 O3' U B 577 -12.145 94.454 106.725 1.00 79.07 O
ATOM 11 C2' U B 577 -11.072 94.172 108.935 1.00 77.65 C
ATOM 12 O2' U B 577 -12.302 94.536 109.524 1.00 77.03 O
ATOM 13 C1' U B 577 -10.522 92.905 109.604 1.00 76.68 C
ATOM 14 N1 U B 577 -9.089 92.932 109.952 1.00 75.47 N
ATOM 15 C2 U B 577 -8.660 93.872 110.888 1.00 75.66 C
ATOM 16 O2 U B 577 -9.407 94.676 111.424 1.00 75.07 O
ATOM 17 N3 U B 577 -7.318 93.836 111.174 1.00 75.14 N
ATOM 18 C4 U B 577 -6.377 92.983 110.641 1.00 76.09 C
ATOM 19 O4 U B 577 -5.203 93.079 111.004 1.00 77.01 O
ATOM 20 C5 U B 577 -6.890 92.044 109.688 1.00 75.35 C
ATOM 21 C6 U B 577 -8.193 92.052 109.382 1.00 75.16 C
ATOM 22 P A B 578 -11.726 95.792 105.944 1.00 80.05 P
ATOM 23 OP1 A B 578 -12.906 96.306 105.209 1.00 81.05 O
ATOM 24 OP2 A B 578 -10.468 95.515 105.203 1.00 81.61 O
ATOM 25 O5' A B 578 -11.412 96.822 107.112 1.00 78.50 O
TER
ATOM 2 P G A 556 3.411 92.502 108.939 1.00 57.02 P
ATOM 3 OP1 G A 556 4.418 92.874 109.968 1.00 57.98 O
ATOM 4 OP2 G A 556 3.090 91.066 108.716 1.00 54.67 O
ATOM 5 O5' G A 556 2.077 93.314 109.251 1.00 57.74 O
ATOM 6 C5' G A 556 2.127 94.700 109.641 1.00 59.01 C
ATOM 7 C4' G A 556 0.733 95.217 109.921 1.00 62.46 C
ATOM 8 O4' G A 556 -0.006 95.385 108.679 1.00 62.50 O
ATOM 9 C3' G A 556 -0.161 94.295 110.735 1.00 63.95 C
ATOM 10 O3' G A 556 0.112 94.308 112.127 1.00 65.70 O
ATOM 11 C2' G A 556 -1.545 94.821 110.396 1.00 63.22 C
ATOM 12 O2' G A 556 -1.851 96.021 111.081 1.00 62.21 O
ATOM 13 C1' G A 556 -1.381 95.097 108.902 1.00 61.66 C
ATOM 14 N9 G A 556 -1.744 93.932 108.099 1.00 60.72 N
ATOM 15 C8 G A 556 -0.929 92.892 107.714 1.00 59.44 C
ATOM 16 N7 G A 556 -1.544 92.005 106.979 1.00 58.62 N
ATOM 17 C5 G A 556 -2.843 92.484 106.877 1.00 58.63 C
ATOM 18 C6 G A 556 -3.967 91.954 106.194 1.00 58.50 C
ATOM 19 O6 G A 556 -4.039 90.925 105.506 1.00 57.70 O
ATOM 20 N1 G A 556 -5.092 92.757 106.361 1.00 57.51 N
ATOM 21 C2 G A 556 -5.130 93.922 107.089 1.00 59.70 C
ATOM 22 N2 G A 556 -6.311 94.555 107.143 1.00 60.31 N
ATOM 23 N3 G A 556 -4.087 94.430 107.722 1.00 59.96 N
ATOM 24 C4 G A 556 -2.985 93.666 107.573 1.00 60.36 C
ATOM 25 P A A 557 -0.442 93.113 113.043 1.00 66.35 P
ATOM 26 OP1 A A 557 0.235 93.251 114.357 1.00 67.06 O
ATOM 27 OP2 A A 557 -0.349 91.825 112.298 1.00 63.43 O
ATOM 28 O5' A A 557 -1.985 93.478 113.202 1.00 66.31 O
TER
ATOM 1 O3' G B 576 -8.336 90.037 106.548 1.00 82.03 O
ATOM 2 P U B 577 -8.710 90.931 105.261 1.00 82.76 P
ATOM 3 OP1 U B 577 -9.297 90.056 104.206 1.00 80.31 O
ATOM 4 OP2 U B 577 -7.531 91.773 104.941 1.00 83.05 O
ATOM 5 O5' U B 577 -9.824 91.928 105.824 1.00 82.41 O
ATOM 6 C5' U B 577 -11.085 91.441 106.358 1.00 80.22 C
ATOM 7 C4' U B 577 -11.491 92.257 107.567 1.00 77.95 C
ATOM 8 O4' U B 577 -10.775 91.802 108.742 1.00 76.75 O
ATOM 9 C3' U B 577 -11.165 93.738 107.473 1.00 78.72 C
ATOM 10 O3' U B 577 -12.145 94.454 106.725 1.00 79.07 O
ATOM 11 C2' U B 577 -11.072 94.172 108.935 1.00 77.65 C
ATOM 12 O2' U B 577 -12.302 94.536 109.524 1.00 77.03 O
ATOM 13 C1' U B 577 -10.522 92.905 109.604 1.00 76.68 C
ATOM 14 N1 U B 577 -9.089 92.932 109.952 1.00 75.47 N
ATOM 15 C2 U B 577 -8.660 93.872 110.888 1.00 75.66 C
ATOM 16 O2 U B 577 -9.407 94.676 111.424 1.00 75.07 O
ATOM 17 N3 U B 577 -7.318 93.836 111.174 1.00 75.14 N
ATOM 18 C4 U B 577 -6.377 92.983 110.641 1.00 76.09 C
ATOM 19 O4 U B 577 -5.203 93.079 111.004 1.00 77.01 O
ATOM 20 C5 U B 577 -6.890 92.044 109.688 1.00 75.35 C
ATOM 21 C6 U B 577 -8.193 92.052 109.382 1.00 75.16 C
ATOM 22 P A B 578 -11.726 95.792 105.944 1.00 80.05 P
ATOM 23 OP1 A B 578 -12.906 96.306 105.209 1.00 81.05 O
ATOM 24 OP2 A B 578 -10.468 95.515 105.203 1.00 81.61 O
ATOM 25 O5' A B 578 -11.412 96.822 107.112 1.00 78.50 O
TER
Atoms:
OP1: (4.418,92.874,109.968)
OP2: (3.090,91.066,108.716)
C3': (-0.161,94.295,110.735)
C1': (-1.381,95.097,108.902)
C5': (2.127,94.700,109.641)
O6: (-4.039,90.925,105.506)
O4': (-0.006,95.385,108.679)
C8: (-0.929,92.892,107.714)
C2: (-5.130,93.922,107.089)
C6: (-3.967,91.954,106.194)
C5: (-2.843,92.484,106.877)
C4: (-2.985,93.666,107.573)
P: (3.411,92.502,108.939)
C4': (0.733,95.217,109.921)
C2': (-1.545,94.821,110.396)
O2': (-1.851,96.021,111.081)
N1: (-5.092,92.757,106.361)
N2: (-6.311,94.555,107.143)
N3: (-4.087,94.430,107.722)
N7: (-1.544,92.005,106.979)
N9: (-1.744,93.932,108.099)
O5': (2.077,93.314,109.251)
O3': (0.112,94.308,112.127)
OP2: (3.090,91.066,108.716)
C3': (-0.161,94.295,110.735)
C1': (-1.381,95.097,108.902)
C5': (2.127,94.700,109.641)
O6: (-4.039,90.925,105.506)
O4': (-0.006,95.385,108.679)
C8: (-0.929,92.892,107.714)
C2: (-5.130,93.922,107.089)
C6: (-3.967,91.954,106.194)
C5: (-2.843,92.484,106.877)
C4: (-2.985,93.666,107.573)
P: (3.411,92.502,108.939)
C4': (0.733,95.217,109.921)
C2': (-1.545,94.821,110.396)
O2': (-1.851,96.021,111.081)
N1: (-5.092,92.757,106.361)
N2: (-6.311,94.555,107.143)
N3: (-4.087,94.430,107.722)
N7: (-1.544,92.005,106.979)
N9: (-1.744,93.932,108.099)
O5': (2.077,93.314,109.251)
O3': (0.112,94.308,112.127)
C4: (-6.377,92.983,110.641)
N3: (-7.318,93.836,111.174)
OP1: (-9.297,90.056,104.206)
OP2: (-7.531,91.773,104.941)
C2: (-8.660,93.872,110.888)
C1': (-10.522,92.905,109.604)
C3': (-11.165,93.738,107.473)
O5': (-9.824,91.928,105.824)
O4': (-10.775,91.802,108.742)
C5': (-11.085,91.441,106.358)
P: (-8.710,90.931,105.261)
C4': (-11.491,92.257,107.567)
C2': (-11.072,94.172,108.935)
O2': (-12.302,94.536,109.524)
N1: (-9.089,92.932,109.952)
O4: (-5.203,93.079,111.004)
O2: (-9.407,94.676,111.424)
C6: (-8.193,92.052,109.382)
C5: (-6.890,92.044,109.688)
O3': (-12.145,94.454,106.725)
N3: (-7.318,93.836,111.174)
OP1: (-9.297,90.056,104.206)
OP2: (-7.531,91.773,104.941)
C2: (-8.660,93.872,110.888)
C1': (-10.522,92.905,109.604)
C3': (-11.165,93.738,107.473)
O5': (-9.824,91.928,105.824)
O4': (-10.775,91.802,108.742)
C5': (-11.085,91.441,106.358)
P: (-8.710,90.931,105.261)
C4': (-11.491,92.257,107.567)
C2': (-11.072,94.172,108.935)
O2': (-12.302,94.536,109.524)
N1: (-9.089,92.932,109.952)
O4: (-5.203,93.079,111.004)
O2: (-9.407,94.676,111.424)
C6: (-8.193,92.052,109.382)
C5: (-6.890,92.044,109.688)
O3': (-12.145,94.454,106.725)
Image (generated by PyMOL):