Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0U:A60:A24
Extra
PDB:
ATOM 1 O3' U A 59 -3.673 9.254 -11.919 1.00 47.28 O
ATOM 2 P G A 60 -2.468 9.204 -10.868 1.00 50.34 P
ATOM 3 OP1 G A 60 -1.262 8.818 -11.638 1.00 44.40 O
ATOM 4 OP2 G A 60 -2.888 8.443 -9.663 1.00 43.93 O
ATOM 5 O5' G A 60 -2.317 10.737 -10.438 1.00 48.16 O
ATOM 6 C5' G A 60 -1.862 11.711 -11.366 1.00 46.22 C
ATOM 7 C4' G A 60 -1.942 13.096 -10.748 1.00 47.06 C
ATOM 8 O4' G A 60 -3.330 13.484 -10.567 1.00 46.18 O
ATOM 9 C3' G A 60 -1.357 13.243 -9.350 1.00 45.86 C
ATOM 10 O3' G A 60 0.062 13.344 -9.402 1.00 45.49 O
ATOM 11 C2' G A 60 -2.001 14.572 -8.989 1.00 45.33 C
ATOM 12 O2' G A 60 -1.471 15.610 -9.785 1.00 46.60 O
ATOM 13 C1' G A 60 -3.437 14.309 -9.421 1.00 44.52 C
ATOM 14 N9 G A 60 -4.220 13.606 -8.416 1.00 43.17 N
ATOM 15 C8 G A 60 -4.294 12.248 -8.245 1.00 45.24 C
ATOM 16 N7 G A 60 -5.069 11.885 -7.260 1.00 43.98 N
ATOM 17 C5 G A 60 -5.541 13.076 -6.748 1.00 40.40 C
ATOM 18 C6 G A 60 -6.419 13.290 -5.670 1.00 40.91 C
ATOM 19 O6 G A 60 -6.955 12.440 -4.952 1.00 41.98 O
ATOM 20 N1 G A 60 -6.650 14.644 -5.465 1.00 41.20 N
ATOM 21 C2 G A 60 -6.086 15.647 -6.222 1.00 42.18 C
ATOM 22 N2 G A 60 -6.424 16.891 -5.877 1.00 43.21 N
ATOM 23 N3 G A 60 -5.252 15.462 -7.237 1.00 41.18 N
ATOM 24 C4 G A 60 -5.027 14.147 -7.444 1.00 41.87 C
ATOM 25 P A A 61 0.963 13.037 -8.110 1.00 49.70 P
ATOM 26 OP1 A A 61 2.345 12.974 -8.638 1.00 45.55 O
ATOM 27 OP2 A A 61 0.397 11.910 -7.335 1.00 43.97 O
ATOM 28 O5' A A 61 0.776 14.338 -7.182 1.00 49.02 O
TER
ATOM 1 O3' G B 23 -7.119 15.182 -1.658 1.00 45.46 O
ATOM 2 P U B 24 -8.438 15.780 -2.335 1.00 43.23 P
ATOM 3 OP1 U B 24 -9.576 15.424 -1.460 1.00 37.52 O
ATOM 4 OP2 U B 24 -8.414 15.422 -3.772 1.00 40.10 O
ATOM 5 O5' U B 24 -8.191 17.360 -2.246 1.00 44.96 O
ATOM 6 C5' U B 24 -8.206 18.022 -0.981 1.00 43.14 C
ATOM 7 C4' U B 24 -7.412 19.310 -1.073 1.00 44.81 C
ATOM 8 O4' U B 24 -6.013 19.023 -0.832 1.00 48.16 O
ATOM 9 C3' U B 24 -7.430 19.954 -2.449 1.00 46.88 C
ATOM 10 O3' U B 24 -8.547 20.825 -2.573 1.00 47.99 O
ATOM 11 C2' U B 24 -6.117 20.730 -2.451 1.00 47.09 C
ATOM 12 O2' U B 24 -6.209 21.929 -1.713 1.00 51.83 O
ATOM 13 C1' U B 24 -5.196 19.786 -1.699 1.00 44.40 C
ATOM 14 N1 U B 24 -4.454 18.876 -2.588 1.00 41.22 N
ATOM 15 C2 U B 24 -3.484 19.398 -3.413 1.00 43.51 C
ATOM 16 O2 U B 24 -3.207 20.577 -3.450 1.00 45.67 O
ATOM 17 N3 U B 24 -2.837 18.492 -4.206 1.00 41.97 N
ATOM 18 C4 U B 24 -3.072 17.137 -4.245 1.00 42.08 C
ATOM 19 O4 U B 24 -2.416 16.442 -5.007 1.00 44.57 O
ATOM 20 C5 U B 24 -4.099 16.664 -3.354 1.00 42.58 C
ATOM 21 C6 U B 24 -4.743 17.534 -2.572 1.00 41.96 C
ATOM 22 P A B 25 -9.225 21.018 -4.011 1.00 51.98 P
ATOM 23 OP1 A B 25 -10.433 21.843 -3.786 1.00 49.63 O
ATOM 24 OP2 A B 25 -9.347 19.687 -4.645 1.00 47.72 O
ATOM 25 O5' A B 25 -8.160 21.870 -4.856 1.00 45.90 O
TER
ATOM 2 P G A 60 -2.468 9.204 -10.868 1.00 50.34 P
ATOM 3 OP1 G A 60 -1.262 8.818 -11.638 1.00 44.40 O
ATOM 4 OP2 G A 60 -2.888 8.443 -9.663 1.00 43.93 O
ATOM 5 O5' G A 60 -2.317 10.737 -10.438 1.00 48.16 O
ATOM 6 C5' G A 60 -1.862 11.711 -11.366 1.00 46.22 C
ATOM 7 C4' G A 60 -1.942 13.096 -10.748 1.00 47.06 C
ATOM 8 O4' G A 60 -3.330 13.484 -10.567 1.00 46.18 O
ATOM 9 C3' G A 60 -1.357 13.243 -9.350 1.00 45.86 C
ATOM 10 O3' G A 60 0.062 13.344 -9.402 1.00 45.49 O
ATOM 11 C2' G A 60 -2.001 14.572 -8.989 1.00 45.33 C
ATOM 12 O2' G A 60 -1.471 15.610 -9.785 1.00 46.60 O
ATOM 13 C1' G A 60 -3.437 14.309 -9.421 1.00 44.52 C
ATOM 14 N9 G A 60 -4.220 13.606 -8.416 1.00 43.17 N
ATOM 15 C8 G A 60 -4.294 12.248 -8.245 1.00 45.24 C
ATOM 16 N7 G A 60 -5.069 11.885 -7.260 1.00 43.98 N
ATOM 17 C5 G A 60 -5.541 13.076 -6.748 1.00 40.40 C
ATOM 18 C6 G A 60 -6.419 13.290 -5.670 1.00 40.91 C
ATOM 19 O6 G A 60 -6.955 12.440 -4.952 1.00 41.98 O
ATOM 20 N1 G A 60 -6.650 14.644 -5.465 1.00 41.20 N
ATOM 21 C2 G A 60 -6.086 15.647 -6.222 1.00 42.18 C
ATOM 22 N2 G A 60 -6.424 16.891 -5.877 1.00 43.21 N
ATOM 23 N3 G A 60 -5.252 15.462 -7.237 1.00 41.18 N
ATOM 24 C4 G A 60 -5.027 14.147 -7.444 1.00 41.87 C
ATOM 25 P A A 61 0.963 13.037 -8.110 1.00 49.70 P
ATOM 26 OP1 A A 61 2.345 12.974 -8.638 1.00 45.55 O
ATOM 27 OP2 A A 61 0.397 11.910 -7.335 1.00 43.97 O
ATOM 28 O5' A A 61 0.776 14.338 -7.182 1.00 49.02 O
TER
ATOM 1 O3' G B 23 -7.119 15.182 -1.658 1.00 45.46 O
ATOM 2 P U B 24 -8.438 15.780 -2.335 1.00 43.23 P
ATOM 3 OP1 U B 24 -9.576 15.424 -1.460 1.00 37.52 O
ATOM 4 OP2 U B 24 -8.414 15.422 -3.772 1.00 40.10 O
ATOM 5 O5' U B 24 -8.191 17.360 -2.246 1.00 44.96 O
ATOM 6 C5' U B 24 -8.206 18.022 -0.981 1.00 43.14 C
ATOM 7 C4' U B 24 -7.412 19.310 -1.073 1.00 44.81 C
ATOM 8 O4' U B 24 -6.013 19.023 -0.832 1.00 48.16 O
ATOM 9 C3' U B 24 -7.430 19.954 -2.449 1.00 46.88 C
ATOM 10 O3' U B 24 -8.547 20.825 -2.573 1.00 47.99 O
ATOM 11 C2' U B 24 -6.117 20.730 -2.451 1.00 47.09 C
ATOM 12 O2' U B 24 -6.209 21.929 -1.713 1.00 51.83 O
ATOM 13 C1' U B 24 -5.196 19.786 -1.699 1.00 44.40 C
ATOM 14 N1 U B 24 -4.454 18.876 -2.588 1.00 41.22 N
ATOM 15 C2 U B 24 -3.484 19.398 -3.413 1.00 43.51 C
ATOM 16 O2 U B 24 -3.207 20.577 -3.450 1.00 45.67 O
ATOM 17 N3 U B 24 -2.837 18.492 -4.206 1.00 41.97 N
ATOM 18 C4 U B 24 -3.072 17.137 -4.245 1.00 42.08 C
ATOM 19 O4 U B 24 -2.416 16.442 -5.007 1.00 44.57 O
ATOM 20 C5 U B 24 -4.099 16.664 -3.354 1.00 42.58 C
ATOM 21 C6 U B 24 -4.743 17.534 -2.572 1.00 41.96 C
ATOM 22 P A B 25 -9.225 21.018 -4.011 1.00 51.98 P
ATOM 23 OP1 A B 25 -10.433 21.843 -3.786 1.00 49.63 O
ATOM 24 OP2 A B 25 -9.347 19.687 -4.645 1.00 47.72 O
ATOM 25 O5' A B 25 -8.160 21.870 -4.856 1.00 45.90 O
TER
Atoms:
OP1: (-1.262,8.818,-11.638)
OP2: (-2.888,8.443,-9.663)
C3': (-1.357,13.243,-9.350)
C1': (-3.437,14.309,-9.421)
C5': (-1.862,11.711,-11.366)
O6: (-6.955,12.440,-4.952)
O4': (-3.330,13.484,-10.567)
C8: (-4.294,12.248,-8.245)
C2: (-6.086,15.647,-6.222)
C6: (-6.419,13.290,-5.670)
C5: (-5.541,13.076,-6.748)
C4: (-5.027,14.147,-7.444)
P: (-2.468,9.204,-10.868)
C4': (-1.942,13.096,-10.748)
C2': (-2.001,14.572,-8.989)
O2': (-1.471,15.610,-9.785)
N1: (-6.650,14.644,-5.465)
N2: (-6.424,16.891,-5.877)
N3: (-5.252,15.462,-7.237)
N7: (-5.069,11.885,-7.260)
N9: (-4.220,13.606,-8.416)
O5': (-2.317,10.737,-10.438)
O3': (0.062,13.344,-9.402)
OP2: (-2.888,8.443,-9.663)
C3': (-1.357,13.243,-9.350)
C1': (-3.437,14.309,-9.421)
C5': (-1.862,11.711,-11.366)
O6: (-6.955,12.440,-4.952)
O4': (-3.330,13.484,-10.567)
C8: (-4.294,12.248,-8.245)
C2: (-6.086,15.647,-6.222)
C6: (-6.419,13.290,-5.670)
C5: (-5.541,13.076,-6.748)
C4: (-5.027,14.147,-7.444)
P: (-2.468,9.204,-10.868)
C4': (-1.942,13.096,-10.748)
C2': (-2.001,14.572,-8.989)
O2': (-1.471,15.610,-9.785)
N1: (-6.650,14.644,-5.465)
N2: (-6.424,16.891,-5.877)
N3: (-5.252,15.462,-7.237)
N7: (-5.069,11.885,-7.260)
N9: (-4.220,13.606,-8.416)
O5': (-2.317,10.737,-10.438)
O3': (0.062,13.344,-9.402)
C4: (-3.072,17.137,-4.245)
N3: (-2.837,18.492,-4.206)
OP1: (-9.576,15.424,-1.460)
OP2: (-8.414,15.422,-3.772)
C2: (-3.484,19.398,-3.413)
C1': (-5.196,19.786,-1.699)
C3': (-7.430,19.954,-2.449)
O5': (-8.191,17.360,-2.246)
O4': (-6.013,19.023,-0.832)
C5': (-8.206,18.022,-0.981)
P: (-8.438,15.780,-2.335)
C4': (-7.412,19.310,-1.073)
C2': (-6.117,20.730,-2.451)
O2': (-6.209,21.929,-1.713)
N1: (-4.454,18.876,-2.588)
O4: (-2.416,16.442,-5.007)
O2: (-3.207,20.577,-3.450)
C6: (-4.743,17.534,-2.572)
C5: (-4.099,16.664,-3.354)
O3': (-8.547,20.825,-2.573)
N3: (-2.837,18.492,-4.206)
OP1: (-9.576,15.424,-1.460)
OP2: (-8.414,15.422,-3.772)
C2: (-3.484,19.398,-3.413)
C1': (-5.196,19.786,-1.699)
C3': (-7.430,19.954,-2.449)
O5': (-8.191,17.360,-2.246)
O4': (-6.013,19.023,-0.832)
C5': (-8.206,18.022,-0.981)
P: (-8.438,15.780,-2.335)
C4': (-7.412,19.310,-1.073)
C2': (-6.117,20.730,-2.451)
O2': (-6.209,21.929,-1.713)
N1: (-4.454,18.876,-2.588)
O4: (-2.416,16.442,-5.007)
O2: (-3.207,20.577,-3.450)
C6: (-4.743,17.534,-2.572)
C5: (-4.099,16.664,-3.354)
O3': (-8.547,20.825,-2.573)
Image (generated by PyMOL):