Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01119:01165
Extra
PDB:
ATOM 1 O3' G A1118 54.103 85.164 190.181 1.00105.91 O
ATOM 2 P G A1119 55.690 85.205 189.931 1.00105.89 P
ATOM 3 OP1 G A1119 56.359 84.846 191.212 1.00106.58 O
ATOM 4 OP2 G A1119 56.049 86.470 189.246 1.00105.30 O
ATOM 5 O5' G A1119 55.932 84.019 188.904 1.00105.18 O
ATOM 6 C5' G A1119 57.127 83.969 188.143 1.00105.22 C
ATOM 7 C4' G A1119 56.899 83.212 186.870 1.00106.40 C
ATOM 8 O4' G A1119 55.684 83.687 186.244 1.00106.52 O
ATOM 9 C3' G A1119 57.997 83.446 185.854 1.00107.84 C
ATOM 10 O3' G A1119 59.079 82.535 186.077 1.00110.72 O
ATOM 11 C2' G A1119 57.275 83.236 184.524 1.00107.15 C
ATOM 12 O2' G A1119 57.181 81.875 184.158 1.00106.82 O
ATOM 13 C1' G A1119 55.870 83.773 184.841 1.00106.34 C
ATOM 14 N9 G A1119 55.567 85.144 184.427 1.00105.30 N
ATOM 15 C8 G A1119 55.014 86.132 185.210 1.00104.88 C
ATOM 16 N7 G A1119 54.835 87.256 184.574 1.00104.50 N
ATOM 17 C5 G A1119 55.300 87.003 183.291 1.00104.60 C
ATOM 18 C6 G A1119 55.364 87.852 182.155 1.00104.77 C
ATOM 19 O6 G A1119 55.004 89.035 182.051 1.00104.22 O
ATOM 20 N1 G A1119 55.914 87.194 181.058 1.00104.83 N
ATOM 21 C2 G A1119 56.345 85.890 181.052 1.00104.36 C
ATOM 22 N2 G A1119 56.854 85.442 179.895 1.00102.98 N
ATOM 23 N3 G A1119 56.285 85.087 182.102 1.00104.69 N
ATOM 24 C4 G A1119 55.758 85.705 183.181 1.00104.76 C
ATOM 25 P A A1120 60.434 83.042 186.797 1.00111.82 P
ATOM 26 OP1 A A1120 60.396 84.523 186.867 1.00112.23 O
ATOM 27 OP2 A A1120 61.580 82.369 186.129 1.00112.16 O
ATOM 28 O5' A A1120 60.343 82.473 188.284 1.00113.06 O
TER
ATOM 1 O3' U B1164 55.837 90.745 177.216 1.00135.88 O
ATOM 2 P U B1165 55.143 89.293 177.140 1.00133.73 P
ATOM 3 OP1 U B1165 53.680 89.468 177.334 1.00133.87 O
ATOM 4 OP2 U B1165 55.895 88.387 178.048 1.00133.81 O
ATOM 5 O5' U B1165 55.399 88.816 175.637 1.00132.21 O
ATOM 6 C5' U B1165 56.741 88.736 175.109 1.00128.29 C
ATOM 7 C4' U B1165 56.919 87.503 174.251 1.00125.08 C
ATOM 8 O4' U B1165 58.343 87.196 174.177 1.00124.84 O
ATOM 9 C3' U B1165 56.267 86.234 174.783 1.00122.64 C
ATOM 10 O3' U B1165 54.951 86.092 174.265 1.00119.18 O
ATOM 11 C2' U B1165 57.240 85.146 174.358 1.00122.88 C
ATOM 12 O2' U B1165 57.115 84.814 172.990 1.00121.62 O
ATOM 13 C1' U B1165 58.569 85.859 174.596 1.00124.05 C
ATOM 14 N1 U B1165 58.978 85.879 176.015 1.00124.88 N
ATOM 15 C2 U B1165 59.741 84.823 176.491 1.00125.44 C
ATOM 16 O2 U B1165 60.088 83.882 175.796 1.00125.89 O
ATOM 17 N3 U B1165 60.086 84.912 177.819 1.00126.30 N
ATOM 18 C4 U B1165 59.755 85.923 178.701 1.00126.71 C
ATOM 19 O4 U B1165 60.148 85.867 179.867 1.00127.17 O
ATOM 20 C5 U B1165 58.968 86.970 178.137 1.00126.17 C
ATOM 21 C6 U B1165 58.616 86.916 176.853 1.00125.31 C
ATOM 22 P A B1166 54.091 84.787 174.619 1.00115.91 P
ATOM 23 OP1 A B1166 52.696 85.042 174.177 1.00115.81 O
ATOM 24 OP2 A B1166 54.354 84.392 176.028 1.00115.02 O
ATOM 25 O5' A B1166 54.714 83.678 173.668 1.00113.31 O
TER
ATOM 2 P G A1119 55.690 85.205 189.931 1.00105.89 P
ATOM 3 OP1 G A1119 56.359 84.846 191.212 1.00106.58 O
ATOM 4 OP2 G A1119 56.049 86.470 189.246 1.00105.30 O
ATOM 5 O5' G A1119 55.932 84.019 188.904 1.00105.18 O
ATOM 6 C5' G A1119 57.127 83.969 188.143 1.00105.22 C
ATOM 7 C4' G A1119 56.899 83.212 186.870 1.00106.40 C
ATOM 8 O4' G A1119 55.684 83.687 186.244 1.00106.52 O
ATOM 9 C3' G A1119 57.997 83.446 185.854 1.00107.84 C
ATOM 10 O3' G A1119 59.079 82.535 186.077 1.00110.72 O
ATOM 11 C2' G A1119 57.275 83.236 184.524 1.00107.15 C
ATOM 12 O2' G A1119 57.181 81.875 184.158 1.00106.82 O
ATOM 13 C1' G A1119 55.870 83.773 184.841 1.00106.34 C
ATOM 14 N9 G A1119 55.567 85.144 184.427 1.00105.30 N
ATOM 15 C8 G A1119 55.014 86.132 185.210 1.00104.88 C
ATOM 16 N7 G A1119 54.835 87.256 184.574 1.00104.50 N
ATOM 17 C5 G A1119 55.300 87.003 183.291 1.00104.60 C
ATOM 18 C6 G A1119 55.364 87.852 182.155 1.00104.77 C
ATOM 19 O6 G A1119 55.004 89.035 182.051 1.00104.22 O
ATOM 20 N1 G A1119 55.914 87.194 181.058 1.00104.83 N
ATOM 21 C2 G A1119 56.345 85.890 181.052 1.00104.36 C
ATOM 22 N2 G A1119 56.854 85.442 179.895 1.00102.98 N
ATOM 23 N3 G A1119 56.285 85.087 182.102 1.00104.69 N
ATOM 24 C4 G A1119 55.758 85.705 183.181 1.00104.76 C
ATOM 25 P A A1120 60.434 83.042 186.797 1.00111.82 P
ATOM 26 OP1 A A1120 60.396 84.523 186.867 1.00112.23 O
ATOM 27 OP2 A A1120 61.580 82.369 186.129 1.00112.16 O
ATOM 28 O5' A A1120 60.343 82.473 188.284 1.00113.06 O
TER
ATOM 1 O3' U B1164 55.837 90.745 177.216 1.00135.88 O
ATOM 2 P U B1165 55.143 89.293 177.140 1.00133.73 P
ATOM 3 OP1 U B1165 53.680 89.468 177.334 1.00133.87 O
ATOM 4 OP2 U B1165 55.895 88.387 178.048 1.00133.81 O
ATOM 5 O5' U B1165 55.399 88.816 175.637 1.00132.21 O
ATOM 6 C5' U B1165 56.741 88.736 175.109 1.00128.29 C
ATOM 7 C4' U B1165 56.919 87.503 174.251 1.00125.08 C
ATOM 8 O4' U B1165 58.343 87.196 174.177 1.00124.84 O
ATOM 9 C3' U B1165 56.267 86.234 174.783 1.00122.64 C
ATOM 10 O3' U B1165 54.951 86.092 174.265 1.00119.18 O
ATOM 11 C2' U B1165 57.240 85.146 174.358 1.00122.88 C
ATOM 12 O2' U B1165 57.115 84.814 172.990 1.00121.62 O
ATOM 13 C1' U B1165 58.569 85.859 174.596 1.00124.05 C
ATOM 14 N1 U B1165 58.978 85.879 176.015 1.00124.88 N
ATOM 15 C2 U B1165 59.741 84.823 176.491 1.00125.44 C
ATOM 16 O2 U B1165 60.088 83.882 175.796 1.00125.89 O
ATOM 17 N3 U B1165 60.086 84.912 177.819 1.00126.30 N
ATOM 18 C4 U B1165 59.755 85.923 178.701 1.00126.71 C
ATOM 19 O4 U B1165 60.148 85.867 179.867 1.00127.17 O
ATOM 20 C5 U B1165 58.968 86.970 178.137 1.00126.17 C
ATOM 21 C6 U B1165 58.616 86.916 176.853 1.00125.31 C
ATOM 22 P A B1166 54.091 84.787 174.619 1.00115.91 P
ATOM 23 OP1 A B1166 52.696 85.042 174.177 1.00115.81 O
ATOM 24 OP2 A B1166 54.354 84.392 176.028 1.00115.02 O
ATOM 25 O5' A B1166 54.714 83.678 173.668 1.00113.31 O
TER
Atoms:
OP1: (56.359,84.846,191.212)
OP2: (56.049,86.470,189.246)
C3': (57.997,83.446,185.854)
C1': (55.870,83.773,184.841)
C5': (57.127,83.969,188.143)
O6: (55.004,89.035,182.051)
O4': (55.684,83.687,186.244)
C8: (55.014,86.132,185.210)
C2: (56.345,85.890,181.052)
C6: (55.364,87.852,182.155)
C5: (55.300,87.003,183.291)
C4: (55.758,85.705,183.181)
P: (55.690,85.205,189.931)
C4': (56.899,83.212,186.870)
C2': (57.275,83.236,184.524)
O2': (57.181,81.875,184.158)
N1: (55.914,87.194,181.058)
N2: (56.854,85.442,179.895)
N3: (56.285,85.087,182.102)
N7: (54.835,87.256,184.574)
N9: (55.567,85.144,184.427)
O5': (55.932,84.019,188.904)
O3': (59.079,82.535,186.077)
OP2: (56.049,86.470,189.246)
C3': (57.997,83.446,185.854)
C1': (55.870,83.773,184.841)
C5': (57.127,83.969,188.143)
O6: (55.004,89.035,182.051)
O4': (55.684,83.687,186.244)
C8: (55.014,86.132,185.210)
C2: (56.345,85.890,181.052)
C6: (55.364,87.852,182.155)
C5: (55.300,87.003,183.291)
C4: (55.758,85.705,183.181)
P: (55.690,85.205,189.931)
C4': (56.899,83.212,186.870)
C2': (57.275,83.236,184.524)
O2': (57.181,81.875,184.158)
N1: (55.914,87.194,181.058)
N2: (56.854,85.442,179.895)
N3: (56.285,85.087,182.102)
N7: (54.835,87.256,184.574)
N9: (55.567,85.144,184.427)
O5': (55.932,84.019,188.904)
O3': (59.079,82.535,186.077)
C4: (59.755,85.923,178.701)
N3: (60.086,84.912,177.819)
OP1: (53.680,89.468,177.334)
OP2: (55.895,88.387,178.048)
C2: (59.741,84.823,176.491)
C1': (58.569,85.859,174.596)
C3': (56.267,86.234,174.783)
O5': (55.399,88.816,175.637)
O4': (58.343,87.196,174.177)
C5': (56.741,88.736,175.109)
P: (55.143,89.293,177.140)
C4': (56.919,87.503,174.251)
C2': (57.240,85.146,174.358)
O2': (57.115,84.814,172.990)
N1: (58.978,85.879,176.015)
O4: (60.148,85.867,179.867)
O2: (60.088,83.882,175.796)
C6: (58.616,86.916,176.853)
C5: (58.968,86.970,178.137)
O3': (54.951,86.092,174.265)
N3: (60.086,84.912,177.819)
OP1: (53.680,89.468,177.334)
OP2: (55.895,88.387,178.048)
C2: (59.741,84.823,176.491)
C1': (58.569,85.859,174.596)
C3': (56.267,86.234,174.783)
O5': (55.399,88.816,175.637)
O4': (58.343,87.196,174.177)
C5': (56.741,88.736,175.109)
P: (55.143,89.293,177.140)
C4': (56.919,87.503,174.251)
C2': (57.240,85.146,174.358)
O2': (57.115,84.814,172.990)
N1: (58.978,85.879,176.015)
O4: (60.148,85.867,179.867)
O2: (60.088,83.882,175.796)
C6: (58.616,86.916,176.853)
C5: (58.968,86.970,178.137)
O3': (54.951,86.092,174.265)
Image (generated by PyMOL):