Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A556:A577
Extra
PDB:
ATOM 1 O3' U A 555 4.325 93.042 108.037 1.00 38.67 O
ATOM 2 P G A 556 3.824 92.434 109.431 1.00 39.85 P
ATOM 3 OP1 G A 556 4.877 92.701 110.454 1.00 38.09 O
ATOM 4 OP2 G A 556 3.441 91.031 109.121 1.00 34.89 O
ATOM 5 O5' G A 556 2.494 93.251 109.773 1.00 39.69 O
ATOM 6 C5' G A 556 2.503 94.652 110.127 1.00 40.90 C
ATOM 7 C4' G A 556 1.086 95.131 110.379 1.00 44.12 C
ATOM 8 O4' G A 556 0.360 95.230 109.122 1.00 44.82 O
ATOM 9 C3' G A 556 0.208 94.191 111.190 1.00 46.17 C
ATOM 10 O3' G A 556 0.428 94.198 112.588 1.00 48.39 O
ATOM 11 C2' G A 556 -1.183 94.676 110.827 1.00 46.59 C
ATOM 12 O2' G A 556 -1.500 95.901 111.467 1.00 45.73 O
ATOM 13 C1' G A 556 -1.011 94.886 109.327 1.00 45.43 C
ATOM 14 N9 G A 556 -1.307 93.658 108.585 1.00 44.98 N
ATOM 15 C8 G A 556 -0.440 92.627 108.286 1.00 44.44 C
ATOM 16 N7 G A 556 -0.989 91.684 107.571 1.00 44.00 N
ATOM 17 C5 G A 556 -2.301 92.110 107.396 1.00 44.50 C
ATOM 18 C6 G A 556 -3.387 91.517 106.680 1.00 44.15 C
ATOM 19 O6 G A 556 -3.399 90.482 105.994 1.00 43.92 O
ATOM 20 N1 G A 556 -4.544 92.275 106.797 1.00 42.84 N
ATOM 21 C2 G A 556 -4.648 93.456 107.483 1.00 43.70 C
ATOM 22 N2 G A 556 -5.861 94.034 107.492 1.00 44.30 N
ATOM 23 N3 G A 556 -3.648 94.033 108.118 1.00 44.15 N
ATOM 24 C4 G A 556 -2.515 93.314 108.037 1.00 44.70 C
ATOM 25 P A A 557 -0.100 92.961 113.467 1.00 48.92 P
ATOM 26 OP1 A A 557 0.610 93.094 114.749 1.00 49.88 O
ATOM 27 OP2 A A 557 -0.025 91.690 112.704 1.00 47.13 O
ATOM 28 O5' A A 557 -1.636 93.295 113.696 1.00 50.57 O
TER
ATOM 1 O3' G B 576 -7.710 89.576 106.950 1.00 65.91 O
ATOM 2 P U B 577 -8.185 90.443 105.679 1.00 68.08 P
ATOM 3 OP1 U B 577 -8.922 89.517 104.768 1.00 67.63 O
ATOM 4 OP2 U B 577 -7.045 91.243 105.149 1.00 66.96 O
ATOM 5 O5' U B 577 -9.207 91.484 106.324 1.00 66.80 O
ATOM 6 C5' U B 577 -10.534 91.067 106.730 1.00 65.92 C
ATOM 7 C4' U B 577 -11.005 91.860 107.929 1.00 63.51 C
ATOM 8 O4' U B 577 -10.333 91.411 109.131 1.00 61.59 O
ATOM 9 C3' U B 577 -10.741 93.353 107.882 1.00 62.85 C
ATOM 10 O3' U B 577 -11.725 94.043 107.124 1.00 63.10 O
ATOM 11 C2' U B 577 -10.784 93.740 109.354 1.00 62.46 C
ATOM 12 O2' U B 577 -12.098 93.935 109.834 1.00 63.51 O
ATOM 13 C1' U B 577 -10.171 92.503 110.021 1.00 60.70 C
ATOM 14 N1 U B 577 -8.743 92.626 110.365 1.00 58.71 N
ATOM 15 C2 U B 577 -8.370 93.586 111.303 1.00 57.50 C
ATOM 16 O2 U B 577 -9.156 94.364 111.809 1.00 54.56 O
ATOM 17 N3 U B 577 -7.035 93.591 111.616 1.00 56.98 N
ATOM 18 C4 U B 577 -6.051 92.763 111.102 1.00 57.75 C
ATOM 19 O4 U B 577 -4.934 92.773 111.611 1.00 58.48 O
ATOM 20 C5 U B 577 -6.501 91.835 110.118 1.00 57.20 C
ATOM 21 C6 U B 577 -7.794 91.795 109.790 1.00 58.06 C
ATOM 22 P A B 578 -11.329 95.400 106.368 1.00 64.55 P
ATOM 23 OP1 A B 578 -12.493 95.914 105.611 1.00 64.35 O
ATOM 24 OP2 A B 578 -10.065 95.101 105.646 1.00 66.43 O
ATOM 25 O5' A B 578 -11.036 96.403 107.560 1.00 61.57 O
TER
ATOM 2 P G A 556 3.824 92.434 109.431 1.00 39.85 P
ATOM 3 OP1 G A 556 4.877 92.701 110.454 1.00 38.09 O
ATOM 4 OP2 G A 556 3.441 91.031 109.121 1.00 34.89 O
ATOM 5 O5' G A 556 2.494 93.251 109.773 1.00 39.69 O
ATOM 6 C5' G A 556 2.503 94.652 110.127 1.00 40.90 C
ATOM 7 C4' G A 556 1.086 95.131 110.379 1.00 44.12 C
ATOM 8 O4' G A 556 0.360 95.230 109.122 1.00 44.82 O
ATOM 9 C3' G A 556 0.208 94.191 111.190 1.00 46.17 C
ATOM 10 O3' G A 556 0.428 94.198 112.588 1.00 48.39 O
ATOM 11 C2' G A 556 -1.183 94.676 110.827 1.00 46.59 C
ATOM 12 O2' G A 556 -1.500 95.901 111.467 1.00 45.73 O
ATOM 13 C1' G A 556 -1.011 94.886 109.327 1.00 45.43 C
ATOM 14 N9 G A 556 -1.307 93.658 108.585 1.00 44.98 N
ATOM 15 C8 G A 556 -0.440 92.627 108.286 1.00 44.44 C
ATOM 16 N7 G A 556 -0.989 91.684 107.571 1.00 44.00 N
ATOM 17 C5 G A 556 -2.301 92.110 107.396 1.00 44.50 C
ATOM 18 C6 G A 556 -3.387 91.517 106.680 1.00 44.15 C
ATOM 19 O6 G A 556 -3.399 90.482 105.994 1.00 43.92 O
ATOM 20 N1 G A 556 -4.544 92.275 106.797 1.00 42.84 N
ATOM 21 C2 G A 556 -4.648 93.456 107.483 1.00 43.70 C
ATOM 22 N2 G A 556 -5.861 94.034 107.492 1.00 44.30 N
ATOM 23 N3 G A 556 -3.648 94.033 108.118 1.00 44.15 N
ATOM 24 C4 G A 556 -2.515 93.314 108.037 1.00 44.70 C
ATOM 25 P A A 557 -0.100 92.961 113.467 1.00 48.92 P
ATOM 26 OP1 A A 557 0.610 93.094 114.749 1.00 49.88 O
ATOM 27 OP2 A A 557 -0.025 91.690 112.704 1.00 47.13 O
ATOM 28 O5' A A 557 -1.636 93.295 113.696 1.00 50.57 O
TER
ATOM 1 O3' G B 576 -7.710 89.576 106.950 1.00 65.91 O
ATOM 2 P U B 577 -8.185 90.443 105.679 1.00 68.08 P
ATOM 3 OP1 U B 577 -8.922 89.517 104.768 1.00 67.63 O
ATOM 4 OP2 U B 577 -7.045 91.243 105.149 1.00 66.96 O
ATOM 5 O5' U B 577 -9.207 91.484 106.324 1.00 66.80 O
ATOM 6 C5' U B 577 -10.534 91.067 106.730 1.00 65.92 C
ATOM 7 C4' U B 577 -11.005 91.860 107.929 1.00 63.51 C
ATOM 8 O4' U B 577 -10.333 91.411 109.131 1.00 61.59 O
ATOM 9 C3' U B 577 -10.741 93.353 107.882 1.00 62.85 C
ATOM 10 O3' U B 577 -11.725 94.043 107.124 1.00 63.10 O
ATOM 11 C2' U B 577 -10.784 93.740 109.354 1.00 62.46 C
ATOM 12 O2' U B 577 -12.098 93.935 109.834 1.00 63.51 O
ATOM 13 C1' U B 577 -10.171 92.503 110.021 1.00 60.70 C
ATOM 14 N1 U B 577 -8.743 92.626 110.365 1.00 58.71 N
ATOM 15 C2 U B 577 -8.370 93.586 111.303 1.00 57.50 C
ATOM 16 O2 U B 577 -9.156 94.364 111.809 1.00 54.56 O
ATOM 17 N3 U B 577 -7.035 93.591 111.616 1.00 56.98 N
ATOM 18 C4 U B 577 -6.051 92.763 111.102 1.00 57.75 C
ATOM 19 O4 U B 577 -4.934 92.773 111.611 1.00 58.48 O
ATOM 20 C5 U B 577 -6.501 91.835 110.118 1.00 57.20 C
ATOM 21 C6 U B 577 -7.794 91.795 109.790 1.00 58.06 C
ATOM 22 P A B 578 -11.329 95.400 106.368 1.00 64.55 P
ATOM 23 OP1 A B 578 -12.493 95.914 105.611 1.00 64.35 O
ATOM 24 OP2 A B 578 -10.065 95.101 105.646 1.00 66.43 O
ATOM 25 O5' A B 578 -11.036 96.403 107.560 1.00 61.57 O
TER
Atoms:
OP1: (4.877,92.701,110.454)
OP2: (3.441,91.031,109.121)
C3': (0.208,94.191,111.190)
C1': (-1.011,94.886,109.327)
C5': (2.503,94.652,110.127)
O6: (-3.399,90.482,105.994)
O4': (0.360,95.230,109.122)
C8: (-0.440,92.627,108.286)
C2: (-4.648,93.456,107.483)
C6: (-3.387,91.517,106.680)
C5: (-2.301,92.110,107.396)
C4: (-2.515,93.314,108.037)
P: (3.824,92.434,109.431)
C4': (1.086,95.131,110.379)
C2': (-1.183,94.676,110.827)
O2': (-1.500,95.901,111.467)
N1: (-4.544,92.275,106.797)
N2: (-5.861,94.034,107.492)
N3: (-3.648,94.033,108.118)
N7: (-0.989,91.684,107.571)
N9: (-1.307,93.658,108.585)
O5': (2.494,93.251,109.773)
O3': (0.428,94.198,112.588)
OP2: (3.441,91.031,109.121)
C3': (0.208,94.191,111.190)
C1': (-1.011,94.886,109.327)
C5': (2.503,94.652,110.127)
O6: (-3.399,90.482,105.994)
O4': (0.360,95.230,109.122)
C8: (-0.440,92.627,108.286)
C2: (-4.648,93.456,107.483)
C6: (-3.387,91.517,106.680)
C5: (-2.301,92.110,107.396)
C4: (-2.515,93.314,108.037)
P: (3.824,92.434,109.431)
C4': (1.086,95.131,110.379)
C2': (-1.183,94.676,110.827)
O2': (-1.500,95.901,111.467)
N1: (-4.544,92.275,106.797)
N2: (-5.861,94.034,107.492)
N3: (-3.648,94.033,108.118)
N7: (-0.989,91.684,107.571)
N9: (-1.307,93.658,108.585)
O5': (2.494,93.251,109.773)
O3': (0.428,94.198,112.588)
C4: (-6.051,92.763,111.102)
N3: (-7.035,93.591,111.616)
OP1: (-8.922,89.517,104.768)
OP2: (-7.045,91.243,105.149)
C2: (-8.370,93.586,111.303)
C1': (-10.171,92.503,110.021)
C3': (-10.741,93.353,107.882)
O5': (-9.207,91.484,106.324)
O4': (-10.333,91.411,109.131)
C5': (-10.534,91.067,106.730)
P: (-8.185,90.443,105.679)
C4': (-11.005,91.860,107.929)
C2': (-10.784,93.740,109.354)
O2': (-12.098,93.935,109.834)
N1: (-8.743,92.626,110.365)
O4: (-4.934,92.773,111.611)
O2: (-9.156,94.364,111.809)
C6: (-7.794,91.795,109.790)
C5: (-6.501,91.835,110.118)
O3': (-11.725,94.043,107.124)
N3: (-7.035,93.591,111.616)
OP1: (-8.922,89.517,104.768)
OP2: (-7.045,91.243,105.149)
C2: (-8.370,93.586,111.303)
C1': (-10.171,92.503,110.021)
C3': (-10.741,93.353,107.882)
O5': (-9.207,91.484,106.324)
O4': (-10.333,91.411,109.131)
C5': (-10.534,91.067,106.730)
P: (-8.185,90.443,105.679)
C4': (-11.005,91.860,107.929)
C2': (-10.784,93.740,109.354)
O2': (-12.098,93.935,109.834)
N1: (-8.743,92.626,110.365)
O4: (-4.934,92.773,111.611)
O2: (-9.156,94.364,111.809)
C6: (-7.794,91.795,109.790)
C5: (-6.501,91.835,110.118)
O3': (-11.725,94.043,107.124)
Image (generated by PyMOL):