Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCJ:0556:0577
Extra
PDB:
ATOM 1 O3' U A 555 4.290 92.735 107.708 1.00 58.19 O
ATOM 2 P G A 556 3.656 92.213 109.077 1.00 56.98 P
ATOM 3 OP1 G A 556 4.575 92.498 110.206 1.00 58.71 O
ATOM 4 OP2 G A 556 3.182 90.828 108.851 1.00 55.39 O
ATOM 5 O5' G A 556 2.397 93.159 109.245 1.00 55.24 O
ATOM 6 C5' G A 556 2.531 94.472 109.769 1.00 55.58 C
ATOM 7 C4' G A 556 1.166 95.046 109.990 1.00 58.71 C
ATOM 8 O4' G A 556 0.502 95.115 108.705 1.00 60.02 O
ATOM 9 C3' G A 556 0.240 94.153 110.793 1.00 58.86 C
ATOM 10 O3' G A 556 0.416 94.271 112.182 1.00 62.51 O
ATOM 11 C2' G A 556 -1.128 94.622 110.348 1.00 57.93 C
ATOM 12 O2' G A 556 -1.510 95.842 110.946 1.00 57.76 O
ATOM 13 C1' G A 556 -0.876 94.824 108.860 1.00 57.63 C
ATOM 14 N9 G A 556 -1.172 93.598 108.135 1.00 56.42 N
ATOM 15 C8 G A 556 -0.314 92.580 107.803 1.00 55.04 C
ATOM 16 N7 G A 556 -0.907 91.595 107.193 1.00 54.39 N
ATOM 17 C5 G A 556 -2.233 91.995 107.117 1.00 55.66 C
ATOM 18 C6 G A 556 -3.359 91.340 106.583 1.00 55.33 C
ATOM 19 O6 G A 556 -3.424 90.227 106.057 1.00 55.33 O
ATOM 20 N1 G A 556 -4.504 92.112 106.713 1.00 56.11 N
ATOM 21 C2 G A 556 -4.560 93.353 107.292 1.00 56.94 C
ATOM 22 N2 G A 556 -5.757 93.950 107.332 1.00 58.34 N
ATOM 23 N3 G A 556 -3.520 93.966 107.797 1.00 56.88 N
ATOM 24 C4 G A 556 -2.400 93.236 107.679 1.00 56.17 C
ATOM 25 P A A 557 -0.093 93.088 113.130 1.00 65.17 P
ATOM 26 OP1 A A 557 0.523 93.304 114.456 1.00 66.17 O
ATOM 27 OP2 A A 557 0.075 91.781 112.441 1.00 64.54 O
ATOM 28 O5' A A 557 -1.648 93.364 113.259 1.00 65.64 O
TER
ATOM 1 O3' G B 576 -7.855 89.313 106.572 1.00 80.66 O
ATOM 2 P U B 577 -8.058 90.352 105.356 1.00 78.96 P
ATOM 3 OP1 U B 577 -8.649 89.649 104.189 1.00 79.08 O
ATOM 4 OP2 U B 577 -6.812 91.119 105.188 1.00 79.87 O
ATOM 5 O5' U B 577 -9.134 91.379 105.920 1.00 78.54 O
ATOM 6 C5' U B 577 -10.507 90.987 106.108 1.00 79.03 C
ATOM 7 C4' U B 577 -11.089 91.677 107.320 1.00 78.47 C
ATOM 8 O4' U B 577 -10.481 91.156 108.526 1.00 78.66 O
ATOM 9 C3' U B 577 -10.840 93.170 107.397 1.00 77.88 C
ATOM 10 O3' U B 577 -11.776 93.893 106.610 1.00 77.23 O
ATOM 11 C2' U B 577 -10.988 93.453 108.886 1.00 78.32 C
ATOM 12 O2' U B 577 -12.333 93.570 109.292 1.00 79.49 O
ATOM 13 C1' U B 577 -10.386 92.185 109.500 1.00 78.56 C
ATOM 14 N1 U B 577 -8.977 92.315 109.909 1.00 78.84 N
ATOM 15 C2 U B 577 -8.649 93.304 110.830 1.00 78.74 C
ATOM 16 O2 U B 577 -9.470 94.051 111.323 1.00 78.35 O
ATOM 17 N3 U B 577 -7.316 93.376 111.154 1.00 78.63 N
ATOM 18 C4 U B 577 -6.298 92.574 110.674 1.00 78.95 C
ATOM 19 O4 U B 577 -5.153 92.736 111.092 1.00 79.06 O
ATOM 20 C5 U B 577 -6.715 91.574 109.737 1.00 78.95 C
ATOM 21 C6 U B 577 -8.007 91.481 109.394 1.00 78.96 C
ATOM 22 P A B 578 -11.370 95.323 106.019 1.00 77.13 P
ATOM 23 OP1 A B 578 -12.516 95.881 105.269 1.00 77.77 O
ATOM 24 OP2 A B 578 -10.062 95.169 105.339 1.00 79.79 O
ATOM 25 O5' A B 578 -11.163 96.203 107.324 1.00 75.74 O
TER
ATOM 2 P G A 556 3.656 92.213 109.077 1.00 56.98 P
ATOM 3 OP1 G A 556 4.575 92.498 110.206 1.00 58.71 O
ATOM 4 OP2 G A 556 3.182 90.828 108.851 1.00 55.39 O
ATOM 5 O5' G A 556 2.397 93.159 109.245 1.00 55.24 O
ATOM 6 C5' G A 556 2.531 94.472 109.769 1.00 55.58 C
ATOM 7 C4' G A 556 1.166 95.046 109.990 1.00 58.71 C
ATOM 8 O4' G A 556 0.502 95.115 108.705 1.00 60.02 O
ATOM 9 C3' G A 556 0.240 94.153 110.793 1.00 58.86 C
ATOM 10 O3' G A 556 0.416 94.271 112.182 1.00 62.51 O
ATOM 11 C2' G A 556 -1.128 94.622 110.348 1.00 57.93 C
ATOM 12 O2' G A 556 -1.510 95.842 110.946 1.00 57.76 O
ATOM 13 C1' G A 556 -0.876 94.824 108.860 1.00 57.63 C
ATOM 14 N9 G A 556 -1.172 93.598 108.135 1.00 56.42 N
ATOM 15 C8 G A 556 -0.314 92.580 107.803 1.00 55.04 C
ATOM 16 N7 G A 556 -0.907 91.595 107.193 1.00 54.39 N
ATOM 17 C5 G A 556 -2.233 91.995 107.117 1.00 55.66 C
ATOM 18 C6 G A 556 -3.359 91.340 106.583 1.00 55.33 C
ATOM 19 O6 G A 556 -3.424 90.227 106.057 1.00 55.33 O
ATOM 20 N1 G A 556 -4.504 92.112 106.713 1.00 56.11 N
ATOM 21 C2 G A 556 -4.560 93.353 107.292 1.00 56.94 C
ATOM 22 N2 G A 556 -5.757 93.950 107.332 1.00 58.34 N
ATOM 23 N3 G A 556 -3.520 93.966 107.797 1.00 56.88 N
ATOM 24 C4 G A 556 -2.400 93.236 107.679 1.00 56.17 C
ATOM 25 P A A 557 -0.093 93.088 113.130 1.00 65.17 P
ATOM 26 OP1 A A 557 0.523 93.304 114.456 1.00 66.17 O
ATOM 27 OP2 A A 557 0.075 91.781 112.441 1.00 64.54 O
ATOM 28 O5' A A 557 -1.648 93.364 113.259 1.00 65.64 O
TER
ATOM 1 O3' G B 576 -7.855 89.313 106.572 1.00 80.66 O
ATOM 2 P U B 577 -8.058 90.352 105.356 1.00 78.96 P
ATOM 3 OP1 U B 577 -8.649 89.649 104.189 1.00 79.08 O
ATOM 4 OP2 U B 577 -6.812 91.119 105.188 1.00 79.87 O
ATOM 5 O5' U B 577 -9.134 91.379 105.920 1.00 78.54 O
ATOM 6 C5' U B 577 -10.507 90.987 106.108 1.00 79.03 C
ATOM 7 C4' U B 577 -11.089 91.677 107.320 1.00 78.47 C
ATOM 8 O4' U B 577 -10.481 91.156 108.526 1.00 78.66 O
ATOM 9 C3' U B 577 -10.840 93.170 107.397 1.00 77.88 C
ATOM 10 O3' U B 577 -11.776 93.893 106.610 1.00 77.23 O
ATOM 11 C2' U B 577 -10.988 93.453 108.886 1.00 78.32 C
ATOM 12 O2' U B 577 -12.333 93.570 109.292 1.00 79.49 O
ATOM 13 C1' U B 577 -10.386 92.185 109.500 1.00 78.56 C
ATOM 14 N1 U B 577 -8.977 92.315 109.909 1.00 78.84 N
ATOM 15 C2 U B 577 -8.649 93.304 110.830 1.00 78.74 C
ATOM 16 O2 U B 577 -9.470 94.051 111.323 1.00 78.35 O
ATOM 17 N3 U B 577 -7.316 93.376 111.154 1.00 78.63 N
ATOM 18 C4 U B 577 -6.298 92.574 110.674 1.00 78.95 C
ATOM 19 O4 U B 577 -5.153 92.736 111.092 1.00 79.06 O
ATOM 20 C5 U B 577 -6.715 91.574 109.737 1.00 78.95 C
ATOM 21 C6 U B 577 -8.007 91.481 109.394 1.00 78.96 C
ATOM 22 P A B 578 -11.370 95.323 106.019 1.00 77.13 P
ATOM 23 OP1 A B 578 -12.516 95.881 105.269 1.00 77.77 O
ATOM 24 OP2 A B 578 -10.062 95.169 105.339 1.00 79.79 O
ATOM 25 O5' A B 578 -11.163 96.203 107.324 1.00 75.74 O
TER
Atoms:
OP1: (4.575,92.498,110.206)
OP2: (3.182,90.828,108.851)
C3': (0.240,94.153,110.793)
C1': (-0.876,94.824,108.860)
C5': (2.531,94.472,109.769)
O6: (-3.424,90.227,106.057)
O4': (0.502,95.115,108.705)
C8: (-0.314,92.580,107.803)
C2: (-4.560,93.353,107.292)
C6: (-3.359,91.340,106.583)
C5: (-2.233,91.995,107.117)
C4: (-2.400,93.236,107.679)
P: (3.656,92.213,109.077)
C4': (1.166,95.046,109.990)
C2': (-1.128,94.622,110.348)
O2': (-1.510,95.842,110.946)
N1: (-4.504,92.112,106.713)
N2: (-5.757,93.950,107.332)
N3: (-3.520,93.966,107.797)
N7: (-0.907,91.595,107.193)
N9: (-1.172,93.598,108.135)
O5': (2.397,93.159,109.245)
O3': (0.416,94.271,112.182)
OP2: (3.182,90.828,108.851)
C3': (0.240,94.153,110.793)
C1': (-0.876,94.824,108.860)
C5': (2.531,94.472,109.769)
O6: (-3.424,90.227,106.057)
O4': (0.502,95.115,108.705)
C8: (-0.314,92.580,107.803)
C2: (-4.560,93.353,107.292)
C6: (-3.359,91.340,106.583)
C5: (-2.233,91.995,107.117)
C4: (-2.400,93.236,107.679)
P: (3.656,92.213,109.077)
C4': (1.166,95.046,109.990)
C2': (-1.128,94.622,110.348)
O2': (-1.510,95.842,110.946)
N1: (-4.504,92.112,106.713)
N2: (-5.757,93.950,107.332)
N3: (-3.520,93.966,107.797)
N7: (-0.907,91.595,107.193)
N9: (-1.172,93.598,108.135)
O5': (2.397,93.159,109.245)
O3': (0.416,94.271,112.182)
C4: (-6.298,92.574,110.674)
N3: (-7.316,93.376,111.154)
OP1: (-8.649,89.649,104.189)
OP2: (-6.812,91.119,105.188)
C2: (-8.649,93.304,110.830)
C1': (-10.386,92.185,109.500)
C3': (-10.840,93.170,107.397)
O5': (-9.134,91.379,105.920)
O4': (-10.481,91.156,108.526)
C5': (-10.507,90.987,106.108)
P: (-8.058,90.352,105.356)
C4': (-11.089,91.677,107.320)
C2': (-10.988,93.453,108.886)
O2': (-12.333,93.570,109.292)
N1: (-8.977,92.315,109.909)
O4: (-5.153,92.736,111.092)
O2: (-9.470,94.051,111.323)
C6: (-8.007,91.481,109.394)
C5: (-6.715,91.574,109.737)
O3': (-11.776,93.893,106.610)
N3: (-7.316,93.376,111.154)
OP1: (-8.649,89.649,104.189)
OP2: (-6.812,91.119,105.188)
C2: (-8.649,93.304,110.830)
C1': (-10.386,92.185,109.500)
C3': (-10.840,93.170,107.397)
O5': (-9.134,91.379,105.920)
O4': (-10.481,91.156,108.526)
C5': (-10.507,90.987,106.108)
P: (-8.058,90.352,105.356)
C4': (-11.089,91.677,107.320)
C2': (-10.988,93.453,108.886)
O2': (-12.333,93.570,109.292)
N1: (-8.977,92.315,109.909)
O4: (-5.153,92.736,111.092)
O2: (-9.470,94.051,111.323)
C6: (-8.007,91.481,109.394)
C5: (-6.715,91.574,109.737)
O3': (-11.776,93.893,106.610)
Image (generated by PyMOL):