Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A292:A334
Extra
PDB:
ATOM 1 O3' C A 291 22.638 140.842 16.581 1.00 73.07 O
ATOM 2 P G A 292 21.679 141.197 17.813 1.00 74.95 P
ATOM 3 OP1 G A 292 20.514 141.990 17.330 1.00 75.20 O
ATOM 4 OP2 G A 292 22.585 141.784 18.846 1.00 75.88 O
ATOM 5 O5' G A 292 21.157 139.769 18.293 1.00 72.67 O
ATOM 6 C5' G A 292 20.464 138.885 17.390 1.00 70.93 C
ATOM 7 C4' G A 292 20.348 137.512 18.006 1.00 69.34 C
ATOM 8 O4' G A 292 21.675 136.960 18.188 1.00 68.59 O
ATOM 9 C3' G A 292 19.714 137.489 19.387 1.00 67.69 C
ATOM 10 O3' G A 292 18.301 137.382 19.267 1.00 66.61 O
ATOM 11 C2' G A 292 20.312 136.233 19.996 1.00 67.96 C
ATOM 12 O2' G A 292 19.656 135.080 19.523 1.00 67.56 O
ATOM 13 C1' G A 292 21.730 136.260 19.418 1.00 68.74 C
ATOM 14 N9 G A 292 22.717 136.913 20.277 1.00 69.33 N
ATOM 15 C8 G A 292 22.917 138.266 20.444 1.00 69.41 C
ATOM 16 N7 G A 292 23.875 138.541 21.285 1.00 70.16 N
ATOM 17 C5 G A 292 24.334 137.296 21.702 1.00 70.11 C
ATOM 18 C6 G A 292 25.362 136.951 22.621 1.00 70.05 C
ATOM 19 O6 G A 292 26.095 137.700 23.276 1.00 70.94 O
ATOM 20 N1 G A 292 25.494 135.572 22.744 1.00 69.25 N
ATOM 21 C2 G A 292 24.740 134.642 22.075 1.00 68.97 C
ATOM 22 N2 G A 292 25.014 133.358 22.336 1.00 67.90 N
ATOM 23 N3 G A 292 23.786 134.947 21.219 1.00 69.40 N
ATOM 24 C4 G A 292 23.634 136.283 21.083 1.00 69.35 C
ATOM 25 P A A 293 17.354 138.432 20.022 1.00 67.00 P
ATOM 26 OP1 A A 293 17.207 139.631 19.162 1.00 67.16 O
ATOM 27 OP2 A A 293 17.810 138.594 21.426 1.00 68.84 O
ATOM 28 O5' A A 293 15.943 137.704 20.073 1.00 66.72 O
TER
ATOM 1 O3' G B 333 27.882 135.130 26.959 1.00 54.74 O
ATOM 2 P U B 334 27.946 133.962 25.844 1.00 56.00 P
ATOM 3 OP1 U B 334 29.254 133.272 26.023 1.00 56.64 O
ATOM 4 OP2 U B 334 27.596 134.517 24.511 1.00 56.86 O
ATOM 5 O5' U B 334 26.855 132.896 26.294 1.00 56.04 O
ATOM 6 C5' U B 334 27.111 132.044 27.431 1.00 56.30 C
ATOM 7 C4' U B 334 25.982 131.074 27.623 1.00 55.73 C
ATOM 8 O4' U B 334 24.791 131.791 28.025 1.00 56.86 O
ATOM 9 C3' U B 334 25.590 130.297 26.384 1.00 55.19 C
ATOM 10 O3' U B 334 26.401 129.135 26.262 1.00 54.16 O
ATOM 11 C2' U B 334 24.143 129.951 26.682 1.00 56.67 C
ATOM 12 O2' U B 334 24.060 128.871 27.593 1.00 57.39 O
ATOM 13 C1' U B 334 23.667 131.225 27.390 1.00 58.06 C
ATOM 14 N1 U B 334 23.102 132.235 26.478 1.00 60.74 N
ATOM 15 C2 U B 334 21.827 132.018 25.964 1.00 61.78 C
ATOM 16 O2 U B 334 21.158 131.033 26.239 1.00 62.28 O
ATOM 17 N3 U B 334 21.370 132.997 25.111 1.00 62.30 N
ATOM 18 C4 U B 334 22.036 134.139 24.724 1.00 63.13 C
ATOM 19 O4 U B 334 21.463 134.956 24.000 1.00 63.46 O
ATOM 20 C5 U B 334 23.342 134.293 25.294 1.00 63.74 C
ATOM 21 C6 U B 334 23.816 133.367 26.134 1.00 62.11 C
ATOM 22 P A B 335 26.975 128.713 24.824 1.00 54.67 P
ATOM 23 OP1 A B 335 27.952 127.615 25.007 1.00 54.92 O
ATOM 24 OP2 A B 335 27.409 129.980 24.169 1.00 53.69 O
ATOM 25 O5' A B 335 25.701 128.119 24.070 1.00 56.57 O
TER
ATOM 2 P G A 292 21.679 141.197 17.813 1.00 74.95 P
ATOM 3 OP1 G A 292 20.514 141.990 17.330 1.00 75.20 O
ATOM 4 OP2 G A 292 22.585 141.784 18.846 1.00 75.88 O
ATOM 5 O5' G A 292 21.157 139.769 18.293 1.00 72.67 O
ATOM 6 C5' G A 292 20.464 138.885 17.390 1.00 70.93 C
ATOM 7 C4' G A 292 20.348 137.512 18.006 1.00 69.34 C
ATOM 8 O4' G A 292 21.675 136.960 18.188 1.00 68.59 O
ATOM 9 C3' G A 292 19.714 137.489 19.387 1.00 67.69 C
ATOM 10 O3' G A 292 18.301 137.382 19.267 1.00 66.61 O
ATOM 11 C2' G A 292 20.312 136.233 19.996 1.00 67.96 C
ATOM 12 O2' G A 292 19.656 135.080 19.523 1.00 67.56 O
ATOM 13 C1' G A 292 21.730 136.260 19.418 1.00 68.74 C
ATOM 14 N9 G A 292 22.717 136.913 20.277 1.00 69.33 N
ATOM 15 C8 G A 292 22.917 138.266 20.444 1.00 69.41 C
ATOM 16 N7 G A 292 23.875 138.541 21.285 1.00 70.16 N
ATOM 17 C5 G A 292 24.334 137.296 21.702 1.00 70.11 C
ATOM 18 C6 G A 292 25.362 136.951 22.621 1.00 70.05 C
ATOM 19 O6 G A 292 26.095 137.700 23.276 1.00 70.94 O
ATOM 20 N1 G A 292 25.494 135.572 22.744 1.00 69.25 N
ATOM 21 C2 G A 292 24.740 134.642 22.075 1.00 68.97 C
ATOM 22 N2 G A 292 25.014 133.358 22.336 1.00 67.90 N
ATOM 23 N3 G A 292 23.786 134.947 21.219 1.00 69.40 N
ATOM 24 C4 G A 292 23.634 136.283 21.083 1.00 69.35 C
ATOM 25 P A A 293 17.354 138.432 20.022 1.00 67.00 P
ATOM 26 OP1 A A 293 17.207 139.631 19.162 1.00 67.16 O
ATOM 27 OP2 A A 293 17.810 138.594 21.426 1.00 68.84 O
ATOM 28 O5' A A 293 15.943 137.704 20.073 1.00 66.72 O
TER
ATOM 1 O3' G B 333 27.882 135.130 26.959 1.00 54.74 O
ATOM 2 P U B 334 27.946 133.962 25.844 1.00 56.00 P
ATOM 3 OP1 U B 334 29.254 133.272 26.023 1.00 56.64 O
ATOM 4 OP2 U B 334 27.596 134.517 24.511 1.00 56.86 O
ATOM 5 O5' U B 334 26.855 132.896 26.294 1.00 56.04 O
ATOM 6 C5' U B 334 27.111 132.044 27.431 1.00 56.30 C
ATOM 7 C4' U B 334 25.982 131.074 27.623 1.00 55.73 C
ATOM 8 O4' U B 334 24.791 131.791 28.025 1.00 56.86 O
ATOM 9 C3' U B 334 25.590 130.297 26.384 1.00 55.19 C
ATOM 10 O3' U B 334 26.401 129.135 26.262 1.00 54.16 O
ATOM 11 C2' U B 334 24.143 129.951 26.682 1.00 56.67 C
ATOM 12 O2' U B 334 24.060 128.871 27.593 1.00 57.39 O
ATOM 13 C1' U B 334 23.667 131.225 27.390 1.00 58.06 C
ATOM 14 N1 U B 334 23.102 132.235 26.478 1.00 60.74 N
ATOM 15 C2 U B 334 21.827 132.018 25.964 1.00 61.78 C
ATOM 16 O2 U B 334 21.158 131.033 26.239 1.00 62.28 O
ATOM 17 N3 U B 334 21.370 132.997 25.111 1.00 62.30 N
ATOM 18 C4 U B 334 22.036 134.139 24.724 1.00 63.13 C
ATOM 19 O4 U B 334 21.463 134.956 24.000 1.00 63.46 O
ATOM 20 C5 U B 334 23.342 134.293 25.294 1.00 63.74 C
ATOM 21 C6 U B 334 23.816 133.367 26.134 1.00 62.11 C
ATOM 22 P A B 335 26.975 128.713 24.824 1.00 54.67 P
ATOM 23 OP1 A B 335 27.952 127.615 25.007 1.00 54.92 O
ATOM 24 OP2 A B 335 27.409 129.980 24.169 1.00 53.69 O
ATOM 25 O5' A B 335 25.701 128.119 24.070 1.00 56.57 O
TER
Atoms:
OP1: (20.514,141.990,17.330)
OP2: (22.585,141.784,18.846)
C3': (19.714,137.489,19.387)
C1': (21.730,136.260,19.418)
C5': (20.464,138.885,17.390)
O6: (26.095,137.700,23.276)
O4': (21.675,136.960,18.188)
C8: (22.917,138.266,20.444)
C2: (24.740,134.642,22.075)
C6: (25.362,136.951,22.621)
C5: (24.334,137.296,21.702)
C4: (23.634,136.283,21.083)
P: (21.679,141.197,17.813)
C4': (20.348,137.512,18.006)
C2': (20.312,136.233,19.996)
O2': (19.656,135.080,19.523)
N1: (25.494,135.572,22.744)
N2: (25.014,133.358,22.336)
N3: (23.786,134.947,21.219)
N7: (23.875,138.541,21.285)
N9: (22.717,136.913,20.277)
O5': (21.157,139.769,18.293)
O3': (18.301,137.382,19.267)
OP2: (22.585,141.784,18.846)
C3': (19.714,137.489,19.387)
C1': (21.730,136.260,19.418)
C5': (20.464,138.885,17.390)
O6: (26.095,137.700,23.276)
O4': (21.675,136.960,18.188)
C8: (22.917,138.266,20.444)
C2: (24.740,134.642,22.075)
C6: (25.362,136.951,22.621)
C5: (24.334,137.296,21.702)
C4: (23.634,136.283,21.083)
P: (21.679,141.197,17.813)
C4': (20.348,137.512,18.006)
C2': (20.312,136.233,19.996)
O2': (19.656,135.080,19.523)
N1: (25.494,135.572,22.744)
N2: (25.014,133.358,22.336)
N3: (23.786,134.947,21.219)
N7: (23.875,138.541,21.285)
N9: (22.717,136.913,20.277)
O5': (21.157,139.769,18.293)
O3': (18.301,137.382,19.267)
C4: (22.036,134.139,24.724)
N3: (21.370,132.997,25.111)
OP1: (29.254,133.272,26.023)
OP2: (27.596,134.517,24.511)
C2: (21.827,132.018,25.964)
C1': (23.667,131.225,27.390)
C3': (25.590,130.297,26.384)
O5': (26.855,132.896,26.294)
O4': (24.791,131.791,28.025)
C5': (27.111,132.044,27.431)
P: (27.946,133.962,25.844)
C4': (25.982,131.074,27.623)
C2': (24.143,129.951,26.682)
O2': (24.060,128.871,27.593)
N1: (23.102,132.235,26.478)
O4: (21.463,134.956,24.000)
O2: (21.158,131.033,26.239)
C6: (23.816,133.367,26.134)
C5: (23.342,134.293,25.294)
O3': (26.401,129.135,26.262)
N3: (21.370,132.997,25.111)
OP1: (29.254,133.272,26.023)
OP2: (27.596,134.517,24.511)
C2: (21.827,132.018,25.964)
C1': (23.667,131.225,27.390)
C3': (25.590,130.297,26.384)
O5': (26.855,132.896,26.294)
O4': (24.791,131.791,28.025)
C5': (27.111,132.044,27.431)
P: (27.946,133.962,25.844)
C4': (25.982,131.074,27.623)
C2': (24.143,129.951,26.682)
O2': (24.060,128.871,27.593)
N1: (23.102,132.235,26.478)
O4: (21.463,134.956,24.000)
O2: (21.158,131.033,26.239)
C6: (23.816,133.367,26.134)
C5: (23.342,134.293,25.294)
O3': (26.401,129.135,26.262)
Image (generated by PyMOL):