ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQF:A878:A863

Extra

PDB:
ATOM 1 O3' U A 877 160.237 88.580 -30.949 1.00 56.78 O
ATOM 2 P G A 878 160.699 89.551 -29.752 1.00 58.22 P
ATOM 3 OP1 G A 878 159.443 89.903 -29.005 1.00 58.33 O
ATOM 4 OP2 G A 878 161.544 90.651 -30.314 1.00 55.02 O
ATOM 5 O5' G A 878 161.559 88.573 -28.849 1.00 55.61 O
ATOM 6 C5' G A 878 160.929 87.456 -28.222 1.00 55.88 C
ATOM 7 C4' G A 878 161.958 86.497 -27.700 1.00 57.99 C
ATOM 8 O4' G A 878 162.728 85.973 -28.807 1.00 60.30 O
ATOM 9 C3' G A 878 163.012 87.056 -26.763 1.00 58.58 C
ATOM 10 O3' G A 878 162.531 87.182 -25.445 1.00 60.21 O
ATOM 11 C2' G A 878 164.129 86.029 -26.897 1.00 57.70 C
ATOM 12 O2' G A 878 163.889 84.836 -26.182 1.00 58.01 O
ATOM 13 C1' G A 878 164.049 85.695 -28.381 1.00 58.00 C
ATOM 14 N9 G A 878 164.958 86.561 -29.112 1.00 56.23 N
ATOM 15 C8 G A 878 164.660 87.766 -29.698 1.00 56.35 C
ATOM 16 N7 G A 878 165.704 88.357 -30.209 1.00 55.91 N
ATOM 17 C5 G A 878 166.748 87.477 -29.962 1.00 55.12 C
ATOM 18 C6 G A 878 168.102 87.588 -30.266 1.00 54.08 C
ATOM 19 O6 G A 878 168.668 88.515 -30.836 1.00 60.24 O
ATOM 20 N1 G A 878 168.824 86.480 -29.837 1.00 50.57 N
ATOM 21 C2 G A 878 168.294 85.398 -29.196 1.00 51.72 C
ATOM 22 N2 G A 878 169.157 84.425 -28.860 1.00 51.39 N
ATOM 23 N3 G A 878 167.012 85.277 -28.902 1.00 52.98 N
ATOM 24 C4 G A 878 166.302 86.353 -29.308 1.00 55.33 C
ATOM 25 P A A 879 163.197 88.260 -24.452 1.00 60.98 P
ATOM 26 OP1 A A 879 162.209 88.387 -23.342 1.00 63.75 O
ATOM 27 OP2 A A 879 163.658 89.473 -25.184 1.00 59.00 O
ATOM 28 O5' A A 879 164.451 87.500 -23.897 1.00 60.19 O
TER

ATOM 1 O3' G B 862 172.792 87.490 -29.302 1.00 65.62 O
ATOM 2 P U B 863 172.724 86.383 -30.470 1.00 64.73 P
ATOM 3 OP1 U B 863 173.651 86.826 -31.559 1.00 63.16 O
ATOM 4 OP2 U B 863 171.312 86.065 -30.796 1.00 64.65 O
ATOM 5 O5' U B 863 173.320 85.106 -29.747 1.00 64.16 O
ATOM 6 C5' U B 863 174.622 85.153 -29.129 1.00 62.47 C
ATOM 7 C4' U B 863 174.624 84.369 -27.844 1.00 61.27 C
ATOM 8 O4' U B 863 174.112 85.169 -26.747 1.00 61.62 O
ATOM 9 C3' U B 863 173.770 83.119 -27.863 1.00 61.09 C
ATOM 10 O3' U B 863 174.476 82.069 -28.476 1.00 60.58 O
ATOM 11 C2' U B 863 173.450 82.906 -26.379 1.00 61.11 C
ATOM 12 O2' U B 863 174.438 82.218 -25.643 1.00 60.78 O
ATOM 13 C1' U B 863 173.366 84.349 -25.860 1.00 60.50 C
ATOM 14 N1 U B 863 171.987 84.873 -25.794 1.00 59.74 N
ATOM 15 C2 U B 863 171.080 84.245 -24.936 1.00 59.48 C
ATOM 16 O2 U B 863 171.370 83.285 -24.231 1.00 60.67 O
ATOM 17 N3 U B 863 169.816 84.782 -24.940 1.00 57.89 N
ATOM 18 C4 U B 863 169.368 85.852 -25.684 1.00 57.88 C
ATOM 19 O4 U B 863 168.197 86.215 -25.569 1.00 56.50 O
ATOM 20 C5 U B 863 170.354 86.446 -26.538 1.00 58.04 C
ATOM 21 C6 U B 863 171.595 85.953 -26.564 1.00 57.59 C
ATOM 22 P A B 864 173.677 80.887 -29.209 1.00 62.14 P
ATOM 23 OP1 A B 864 174.722 79.909 -29.657 1.00 61.49 O
ATOM 24 OP2 A B 864 172.730 81.486 -30.190 1.00 61.97 O
ATOM 25 O5' A B 864 172.875 80.174 -28.042 1.00 60.01 O
TER

Atoms:
OP1: (159.443,89.903,-29.005)
OP2: (161.544,90.651,-30.314)
C3': (163.012,87.056,-26.763)
C1': (164.049,85.695,-28.381)
C5': (160.929,87.456,-28.222)
O6: (168.668,88.515,-30.836)
O4': (162.728,85.973,-28.807)
C8: (164.660,87.766,-29.698)
C2: (168.294,85.398,-29.196)
C6: (168.102,87.588,-30.266)
C5: (166.748,87.477,-29.962)
C4: (166.302,86.353,-29.308)
P: (160.699,89.551,-29.752)
C4': (161.958,86.497,-27.700)
C2': (164.129,86.029,-26.897)
O2': (163.889,84.836,-26.182)
N1: (168.824,86.480,-29.837)
N2: (169.157,84.425,-28.860)
N3: (167.012,85.277,-28.902)
N7: (165.704,88.357,-30.209)
N9: (164.958,86.561,-29.112)
O5': (161.559,88.573,-28.849)
O3': (162.531,87.182,-25.445)
C4: (169.368,85.852,-25.684)
N3: (169.816,84.782,-24.940)
OP1: (173.651,86.826,-31.559)
OP2: (171.312,86.065,-30.796)
C2: (171.080,84.245,-24.936)
C1': (173.366,84.349,-25.860)
C3': (173.770,83.119,-27.863)
O5': (173.320,85.106,-29.747)
O4': (174.112,85.169,-26.747)
C5': (174.622,85.153,-29.129)
P: (172.724,86.383,-30.470)
C4': (174.624,84.369,-27.844)
C2': (173.450,82.906,-26.379)
O2': (174.438,82.218,-25.643)
N1: (171.987,84.873,-25.794)
O4: (168.197,86.215,-25.569)
O2: (171.370,83.285,-24.231)
C6: (171.595,85.953,-26.564)
C5: (170.354,86.446,-26.538)
O3': (174.476,82.069,-28.476)
Image (generated by PyMOL):
PyMOL image
show in jmol