Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3I56:0556:0577
Extra
PDB:
ATOM 1 O3' U A 555 4.170 93.243 107.949 1.00 36.39 O
ATOM 2 P G A 556 3.584 92.792 109.384 1.00 37.19 P
ATOM 3 OP1 G A 556 4.572 93.225 110.408 1.00 36.55 O
ATOM 4 OP2 G A 556 3.176 91.359 109.329 1.00 35.45 O
ATOM 5 O5' G A 556 2.271 93.678 109.549 1.00 36.51 O
ATOM 6 C5' G A 556 2.330 95.007 110.089 1.00 38.24 C
ATOM 7 C4' G A 556 0.940 95.480 110.441 1.00 41.21 C
ATOM 8 O4' G A 556 0.177 95.710 109.228 1.00 41.45 O
ATOM 9 C3' G A 556 0.093 94.482 111.215 1.00 42.75 C
ATOM 10 O3' G A 556 0.382 94.464 112.600 1.00 44.45 O
ATOM 11 C2' G A 556 -1.316 94.955 110.909 1.00 42.00 C
ATOM 12 O2' G A 556 -1.685 96.095 111.655 1.00 43.31 O
ATOM 13 C1' G A 556 -1.173 95.328 109.436 1.00 41.82 C
ATOM 14 N9 G A 556 -1.458 94.176 108.589 1.00 42.18 N
ATOM 15 C8 G A 556 -0.592 93.171 108.221 1.00 42.07 C
ATOM 16 N7 G A 556 -1.153 92.262 107.475 1.00 42.08 N
ATOM 17 C5 G A 556 -2.464 92.694 107.338 1.00 42.11 C
ATOM 18 C6 G A 556 -3.545 92.120 106.637 1.00 42.44 C
ATOM 19 O6 G A 556 -3.570 91.071 105.983 1.00 42.83 O
ATOM 20 N1 G A 556 -4.693 92.897 106.750 1.00 42.87 N
ATOM 21 C2 G A 556 -4.785 94.074 107.454 1.00 42.53 C
ATOM 22 N2 G A 556 -5.977 94.685 107.441 1.00 43.48 N
ATOM 23 N3 G A 556 -3.785 94.612 108.118 1.00 41.25 N
ATOM 24 C4 G A 556 -2.663 93.877 108.016 1.00 41.96 C
ATOM 25 P A A 557 -0.188 93.273 113.509 1.00 45.20 P
ATOM 26 OP1 A A 557 0.555 93.363 114.785 1.00 45.48 O
ATOM 27 OP2 A A 557 -0.199 91.983 112.750 1.00 43.11 O
ATOM 28 O5' A A 557 -1.697 93.712 113.753 1.00 46.15 O
TER
ATOM 1 O3' G B 576 -7.888 90.065 106.845 1.00 58.68 O
ATOM 2 P U B 577 -8.404 90.953 105.606 1.00 58.86 P
ATOM 3 OP1 U B 577 -9.112 90.063 104.643 1.00 59.01 O
ATOM 4 OP2 U B 577 -7.281 91.793 105.134 1.00 57.76 O
ATOM 5 O5' U B 577 -9.460 91.931 106.289 1.00 56.92 O
ATOM 6 C5' U B 577 -10.739 91.442 106.757 1.00 53.56 C
ATOM 7 C4' U B 577 -11.184 92.218 107.973 1.00 49.81 C
ATOM 8 O4' U B 577 -10.464 91.769 109.146 1.00 48.41 O
ATOM 9 C3' U B 577 -10.904 93.704 107.910 1.00 49.38 C
ATOM 10 O3' U B 577 -11.885 94.391 107.154 1.00 49.15 O
ATOM 11 C2' U B 577 -10.871 94.108 109.379 1.00 49.44 C
ATOM 12 O2' U B 577 -12.140 94.364 109.941 1.00 50.41 O
ATOM 13 C1' U B 577 -10.251 92.863 110.025 1.00 48.36 C
ATOM 14 N1 U B 577 -8.809 92.974 110.304 1.00 48.49 N
ATOM 15 C2 U B 577 -8.391 93.960 111.194 1.00 47.45 C
ATOM 16 O2 U B 577 -9.157 94.735 111.737 1.00 46.87 O
ATOM 17 N3 U B 577 -7.038 94.003 111.419 1.00 45.96 N
ATOM 18 C4 U B 577 -6.077 93.189 110.863 1.00 46.97 C
ATOM 19 O4 U B 577 -4.899 93.359 111.165 1.00 47.63 O
ATOM 20 C5 U B 577 -6.578 92.199 109.954 1.00 47.61 C
ATOM 21 C6 U B 577 -7.892 92.127 109.710 1.00 48.35 C
ATOM 22 P A B 578 -11.474 95.713 106.351 1.00 50.96 P
ATOM 23 OP1 A B 578 -12.644 96.186 105.583 1.00 51.37 O
ATOM 24 OP2 A B 578 -10.210 95.418 105.636 1.00 53.40 O
ATOM 25 O5' A B 578 -11.181 96.769 107.503 1.00 49.50 O
TER
ATOM 2 P G A 556 3.584 92.792 109.384 1.00 37.19 P
ATOM 3 OP1 G A 556 4.572 93.225 110.408 1.00 36.55 O
ATOM 4 OP2 G A 556 3.176 91.359 109.329 1.00 35.45 O
ATOM 5 O5' G A 556 2.271 93.678 109.549 1.00 36.51 O
ATOM 6 C5' G A 556 2.330 95.007 110.089 1.00 38.24 C
ATOM 7 C4' G A 556 0.940 95.480 110.441 1.00 41.21 C
ATOM 8 O4' G A 556 0.177 95.710 109.228 1.00 41.45 O
ATOM 9 C3' G A 556 0.093 94.482 111.215 1.00 42.75 C
ATOM 10 O3' G A 556 0.382 94.464 112.600 1.00 44.45 O
ATOM 11 C2' G A 556 -1.316 94.955 110.909 1.00 42.00 C
ATOM 12 O2' G A 556 -1.685 96.095 111.655 1.00 43.31 O
ATOM 13 C1' G A 556 -1.173 95.328 109.436 1.00 41.82 C
ATOM 14 N9 G A 556 -1.458 94.176 108.589 1.00 42.18 N
ATOM 15 C8 G A 556 -0.592 93.171 108.221 1.00 42.07 C
ATOM 16 N7 G A 556 -1.153 92.262 107.475 1.00 42.08 N
ATOM 17 C5 G A 556 -2.464 92.694 107.338 1.00 42.11 C
ATOM 18 C6 G A 556 -3.545 92.120 106.637 1.00 42.44 C
ATOM 19 O6 G A 556 -3.570 91.071 105.983 1.00 42.83 O
ATOM 20 N1 G A 556 -4.693 92.897 106.750 1.00 42.87 N
ATOM 21 C2 G A 556 -4.785 94.074 107.454 1.00 42.53 C
ATOM 22 N2 G A 556 -5.977 94.685 107.441 1.00 43.48 N
ATOM 23 N3 G A 556 -3.785 94.612 108.118 1.00 41.25 N
ATOM 24 C4 G A 556 -2.663 93.877 108.016 1.00 41.96 C
ATOM 25 P A A 557 -0.188 93.273 113.509 1.00 45.20 P
ATOM 26 OP1 A A 557 0.555 93.363 114.785 1.00 45.48 O
ATOM 27 OP2 A A 557 -0.199 91.983 112.750 1.00 43.11 O
ATOM 28 O5' A A 557 -1.697 93.712 113.753 1.00 46.15 O
TER
ATOM 1 O3' G B 576 -7.888 90.065 106.845 1.00 58.68 O
ATOM 2 P U B 577 -8.404 90.953 105.606 1.00 58.86 P
ATOM 3 OP1 U B 577 -9.112 90.063 104.643 1.00 59.01 O
ATOM 4 OP2 U B 577 -7.281 91.793 105.134 1.00 57.76 O
ATOM 5 O5' U B 577 -9.460 91.931 106.289 1.00 56.92 O
ATOM 6 C5' U B 577 -10.739 91.442 106.757 1.00 53.56 C
ATOM 7 C4' U B 577 -11.184 92.218 107.973 1.00 49.81 C
ATOM 8 O4' U B 577 -10.464 91.769 109.146 1.00 48.41 O
ATOM 9 C3' U B 577 -10.904 93.704 107.910 1.00 49.38 C
ATOM 10 O3' U B 577 -11.885 94.391 107.154 1.00 49.15 O
ATOM 11 C2' U B 577 -10.871 94.108 109.379 1.00 49.44 C
ATOM 12 O2' U B 577 -12.140 94.364 109.941 1.00 50.41 O
ATOM 13 C1' U B 577 -10.251 92.863 110.025 1.00 48.36 C
ATOM 14 N1 U B 577 -8.809 92.974 110.304 1.00 48.49 N
ATOM 15 C2 U B 577 -8.391 93.960 111.194 1.00 47.45 C
ATOM 16 O2 U B 577 -9.157 94.735 111.737 1.00 46.87 O
ATOM 17 N3 U B 577 -7.038 94.003 111.419 1.00 45.96 N
ATOM 18 C4 U B 577 -6.077 93.189 110.863 1.00 46.97 C
ATOM 19 O4 U B 577 -4.899 93.359 111.165 1.00 47.63 O
ATOM 20 C5 U B 577 -6.578 92.199 109.954 1.00 47.61 C
ATOM 21 C6 U B 577 -7.892 92.127 109.710 1.00 48.35 C
ATOM 22 P A B 578 -11.474 95.713 106.351 1.00 50.96 P
ATOM 23 OP1 A B 578 -12.644 96.186 105.583 1.00 51.37 O
ATOM 24 OP2 A B 578 -10.210 95.418 105.636 1.00 53.40 O
ATOM 25 O5' A B 578 -11.181 96.769 107.503 1.00 49.50 O
TER
Atoms:
OP1: (4.572,93.225,110.408)
OP2: (3.176,91.359,109.329)
C3': (0.093,94.482,111.215)
C1': (-1.173,95.328,109.436)
C5': (2.330,95.007,110.089)
O6: (-3.570,91.071,105.983)
O4': (0.177,95.710,109.228)
C8: (-0.592,93.171,108.221)
C2: (-4.785,94.074,107.454)
C6: (-3.545,92.120,106.637)
C5: (-2.464,92.694,107.338)
C4: (-2.663,93.877,108.016)
P: (3.584,92.792,109.384)
C4': (0.940,95.480,110.441)
C2': (-1.316,94.955,110.909)
O2': (-1.685,96.095,111.655)
N1: (-4.693,92.897,106.750)
N2: (-5.977,94.685,107.441)
N3: (-3.785,94.612,108.118)
N7: (-1.153,92.262,107.475)
N9: (-1.458,94.176,108.589)
O5': (2.271,93.678,109.549)
O3': (0.382,94.464,112.600)
OP2: (3.176,91.359,109.329)
C3': (0.093,94.482,111.215)
C1': (-1.173,95.328,109.436)
C5': (2.330,95.007,110.089)
O6: (-3.570,91.071,105.983)
O4': (0.177,95.710,109.228)
C8: (-0.592,93.171,108.221)
C2: (-4.785,94.074,107.454)
C6: (-3.545,92.120,106.637)
C5: (-2.464,92.694,107.338)
C4: (-2.663,93.877,108.016)
P: (3.584,92.792,109.384)
C4': (0.940,95.480,110.441)
C2': (-1.316,94.955,110.909)
O2': (-1.685,96.095,111.655)
N1: (-4.693,92.897,106.750)
N2: (-5.977,94.685,107.441)
N3: (-3.785,94.612,108.118)
N7: (-1.153,92.262,107.475)
N9: (-1.458,94.176,108.589)
O5': (2.271,93.678,109.549)
O3': (0.382,94.464,112.600)
C4: (-6.077,93.189,110.863)
N3: (-7.038,94.003,111.419)
OP1: (-9.112,90.063,104.643)
OP2: (-7.281,91.793,105.134)
C2: (-8.391,93.960,111.194)
C1': (-10.251,92.863,110.025)
C3': (-10.904,93.704,107.910)
O5': (-9.460,91.931,106.289)
O4': (-10.464,91.769,109.146)
C5': (-10.739,91.442,106.757)
P: (-8.404,90.953,105.606)
C4': (-11.184,92.218,107.973)
C2': (-10.871,94.108,109.379)
O2': (-12.140,94.364,109.941)
N1: (-8.809,92.974,110.304)
O4: (-4.899,93.359,111.165)
O2: (-9.157,94.735,111.737)
C6: (-7.892,92.127,109.710)
C5: (-6.578,92.199,109.954)
O3': (-11.885,94.391,107.154)
N3: (-7.038,94.003,111.419)
OP1: (-9.112,90.063,104.643)
OP2: (-7.281,91.793,105.134)
C2: (-8.391,93.960,111.194)
C1': (-10.251,92.863,110.025)
C3': (-10.904,93.704,107.910)
O5': (-9.460,91.931,106.289)
O4': (-10.464,91.769,109.146)
C5': (-10.739,91.442,106.757)
P: (-8.404,90.953,105.606)
C4': (-11.184,92.218,107.973)
C2': (-10.871,94.108,109.379)
O2': (-12.140,94.364,109.941)
N1: (-8.809,92.974,110.304)
O4: (-4.899,93.359,111.165)
O2: (-9.157,94.735,111.737)
C6: (-7.892,92.127,109.710)
C5: (-6.578,92.199,109.954)
O3': (-11.885,94.391,107.154)
Image (generated by PyMOL):