Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0280:0347
Extra
PDB:
ATOM 1 O3' C A 279 55.374 128.362 -1.913 1.00 60.49 O
ATOM 2 P G A 280 54.756 129.166 -0.668 1.00 61.06 P
ATOM 3 OP1 G A 280 53.758 130.128 -1.210 1.00 60.87 O
ATOM 4 OP2 G A 280 55.889 129.668 0.154 1.00 60.23 O
ATOM 5 O5' G A 280 53.976 128.052 0.164 1.00 59.84 O
ATOM 6 C5' G A 280 52.823 127.381 -0.389 1.00 59.99 C
ATOM 7 C4' G A 280 52.453 126.183 0.459 1.00 59.92 C
ATOM 8 O4' G A 280 53.529 125.205 0.419 1.00 59.98 O
ATOM 9 C3' G A 280 52.272 126.463 1.941 1.00 59.99 C
ATOM 10 O3' G A 280 50.998 127.015 2.239 1.00 60.84 O
ATOM 11 C2' G A 280 52.505 125.090 2.554 1.00 59.21 C
ATOM 12 O2' G A 280 51.399 124.222 2.421 1.00 59.35 O
ATOM 13 C1' G A 280 53.655 124.577 1.687 1.00 58.58 C
ATOM 14 N9 G A 280 54.955 124.939 2.244 1.00 58.33 N
ATOM 15 C8 G A 280 55.634 126.125 2.071 1.00 57.66 C
ATOM 16 N7 G A 280 56.773 126.160 2.705 1.00 56.91 N
ATOM 17 C5 G A 280 56.855 124.923 3.332 1.00 56.76 C
ATOM 18 C6 G A 280 57.867 124.381 4.163 1.00 55.91 C
ATOM 19 O6 G A 280 58.933 124.895 4.508 1.00 56.31 O
ATOM 20 N1 G A 280 57.541 123.100 4.598 1.00 54.40 N
ATOM 21 C2 G A 280 56.394 122.422 4.268 1.00 55.12 C
ATOM 22 N2 G A 280 56.258 121.194 4.787 1.00 54.41 N
ATOM 23 N3 G A 280 55.447 122.912 3.487 1.00 56.20 N
ATOM 24 C4 G A 280 55.740 124.159 3.059 1.00 57.00 C
ATOM 25 P A A 281 50.787 127.829 3.609 1.00 62.60 P
ATOM 26 OP1 A A 281 49.484 128.542 3.488 1.00 61.96 O
ATOM 27 OP2 A A 281 52.021 128.606 3.901 1.00 60.97 O
ATOM 28 O5' A A 281 50.664 126.673 4.703 1.00 61.26 O
TER
ATOM 1 O3' G B 346 58.835 122.812 8.624 1.00 65.35 O
ATOM 2 P U B 347 59.692 121.731 7.792 1.00 65.55 P
ATOM 3 OP1 U B 347 61.051 121.607 8.380 1.00 65.48 O
ATOM 4 OP2 U B 347 59.542 122.062 6.354 1.00 66.41 O
ATOM 5 O5' U B 347 58.900 120.365 8.012 1.00 65.07 O
ATOM 6 C5' U B 347 59.060 119.586 9.215 1.00 63.19 C
ATOM 7 C4' U B 347 57.751 118.924 9.583 1.00 62.40 C
ATOM 8 O4' U B 347 56.786 119.939 9.964 1.00 61.51 O
ATOM 9 C3' U B 347 57.065 118.153 8.467 1.00 62.49 C
ATOM 10 O3' U B 347 57.599 116.836 8.363 1.00 65.04 O
ATOM 11 C2' U B 347 55.607 118.152 8.911 1.00 61.24 C
ATOM 12 O2' U B 347 55.322 117.158 9.877 1.00 60.54 O
ATOM 13 C1' U B 347 55.488 119.532 9.567 1.00 60.03 C
ATOM 14 N1 U B 347 54.892 120.591 8.734 1.00 58.74 N
ATOM 15 C2 U B 347 53.546 120.485 8.426 1.00 58.40 C
ATOM 16 O2 U B 347 52.857 119.537 8.769 1.00 59.82 O
ATOM 17 N3 U B 347 53.034 121.528 7.696 1.00 57.62 N
ATOM 18 C4 U B 347 53.709 122.638 7.241 1.00 57.53 C
ATOM 19 O4 U B 347 53.090 123.512 6.630 1.00 56.51 O
ATOM 20 C5 U B 347 55.103 122.666 7.573 1.00 57.08 C
ATOM 21 C6 U B 347 55.634 121.668 8.287 1.00 57.70 C
ATOM 22 P A B 348 57.684 116.113 6.929 1.00 66.45 P
ATOM 23 OP1 A B 348 58.355 114.803 7.164 1.00 65.09 O
ATOM 24 OP2 A B 348 58.259 117.064 5.943 1.00 64.80 O
ATOM 25 O5' A B 348 56.160 115.860 6.532 1.00 64.60 O
TER
ATOM 2 P G A 280 54.756 129.166 -0.668 1.00 61.06 P
ATOM 3 OP1 G A 280 53.758 130.128 -1.210 1.00 60.87 O
ATOM 4 OP2 G A 280 55.889 129.668 0.154 1.00 60.23 O
ATOM 5 O5' G A 280 53.976 128.052 0.164 1.00 59.84 O
ATOM 6 C5' G A 280 52.823 127.381 -0.389 1.00 59.99 C
ATOM 7 C4' G A 280 52.453 126.183 0.459 1.00 59.92 C
ATOM 8 O4' G A 280 53.529 125.205 0.419 1.00 59.98 O
ATOM 9 C3' G A 280 52.272 126.463 1.941 1.00 59.99 C
ATOM 10 O3' G A 280 50.998 127.015 2.239 1.00 60.84 O
ATOM 11 C2' G A 280 52.505 125.090 2.554 1.00 59.21 C
ATOM 12 O2' G A 280 51.399 124.222 2.421 1.00 59.35 O
ATOM 13 C1' G A 280 53.655 124.577 1.687 1.00 58.58 C
ATOM 14 N9 G A 280 54.955 124.939 2.244 1.00 58.33 N
ATOM 15 C8 G A 280 55.634 126.125 2.071 1.00 57.66 C
ATOM 16 N7 G A 280 56.773 126.160 2.705 1.00 56.91 N
ATOM 17 C5 G A 280 56.855 124.923 3.332 1.00 56.76 C
ATOM 18 C6 G A 280 57.867 124.381 4.163 1.00 55.91 C
ATOM 19 O6 G A 280 58.933 124.895 4.508 1.00 56.31 O
ATOM 20 N1 G A 280 57.541 123.100 4.598 1.00 54.40 N
ATOM 21 C2 G A 280 56.394 122.422 4.268 1.00 55.12 C
ATOM 22 N2 G A 280 56.258 121.194 4.787 1.00 54.41 N
ATOM 23 N3 G A 280 55.447 122.912 3.487 1.00 56.20 N
ATOM 24 C4 G A 280 55.740 124.159 3.059 1.00 57.00 C
ATOM 25 P A A 281 50.787 127.829 3.609 1.00 62.60 P
ATOM 26 OP1 A A 281 49.484 128.542 3.488 1.00 61.96 O
ATOM 27 OP2 A A 281 52.021 128.606 3.901 1.00 60.97 O
ATOM 28 O5' A A 281 50.664 126.673 4.703 1.00 61.26 O
TER
ATOM 1 O3' G B 346 58.835 122.812 8.624 1.00 65.35 O
ATOM 2 P U B 347 59.692 121.731 7.792 1.00 65.55 P
ATOM 3 OP1 U B 347 61.051 121.607 8.380 1.00 65.48 O
ATOM 4 OP2 U B 347 59.542 122.062 6.354 1.00 66.41 O
ATOM 5 O5' U B 347 58.900 120.365 8.012 1.00 65.07 O
ATOM 6 C5' U B 347 59.060 119.586 9.215 1.00 63.19 C
ATOM 7 C4' U B 347 57.751 118.924 9.583 1.00 62.40 C
ATOM 8 O4' U B 347 56.786 119.939 9.964 1.00 61.51 O
ATOM 9 C3' U B 347 57.065 118.153 8.467 1.00 62.49 C
ATOM 10 O3' U B 347 57.599 116.836 8.363 1.00 65.04 O
ATOM 11 C2' U B 347 55.607 118.152 8.911 1.00 61.24 C
ATOM 12 O2' U B 347 55.322 117.158 9.877 1.00 60.54 O
ATOM 13 C1' U B 347 55.488 119.532 9.567 1.00 60.03 C
ATOM 14 N1 U B 347 54.892 120.591 8.734 1.00 58.74 N
ATOM 15 C2 U B 347 53.546 120.485 8.426 1.00 58.40 C
ATOM 16 O2 U B 347 52.857 119.537 8.769 1.00 59.82 O
ATOM 17 N3 U B 347 53.034 121.528 7.696 1.00 57.62 N
ATOM 18 C4 U B 347 53.709 122.638 7.241 1.00 57.53 C
ATOM 19 O4 U B 347 53.090 123.512 6.630 1.00 56.51 O
ATOM 20 C5 U B 347 55.103 122.666 7.573 1.00 57.08 C
ATOM 21 C6 U B 347 55.634 121.668 8.287 1.00 57.70 C
ATOM 22 P A B 348 57.684 116.113 6.929 1.00 66.45 P
ATOM 23 OP1 A B 348 58.355 114.803 7.164 1.00 65.09 O
ATOM 24 OP2 A B 348 58.259 117.064 5.943 1.00 64.80 O
ATOM 25 O5' A B 348 56.160 115.860 6.532 1.00 64.60 O
TER
Atoms:
OP1: (53.758,130.128,-1.210)
OP2: (55.889,129.668,0.154)
C3': (52.272,126.463,1.941)
C1': (53.655,124.577,1.687)
C5': (52.823,127.381,-0.389)
O6: (58.933,124.895,4.508)
O4': (53.529,125.205,0.419)
C8: (55.634,126.125,2.071)
C2: (56.394,122.422,4.268)
C6: (57.867,124.381,4.163)
C5: (56.855,124.923,3.332)
C4: (55.740,124.159,3.059)
P: (54.756,129.166,-0.668)
C4': (52.453,126.183,0.459)
C2': (52.505,125.090,2.554)
O2': (51.399,124.222,2.421)
N1: (57.541,123.100,4.598)
N2: (56.258,121.194,4.787)
N3: (55.447,122.912,3.487)
N7: (56.773,126.160,2.705)
N9: (54.955,124.939,2.244)
O5': (53.976,128.052,0.164)
O3': (50.998,127.015,2.239)
OP2: (55.889,129.668,0.154)
C3': (52.272,126.463,1.941)
C1': (53.655,124.577,1.687)
C5': (52.823,127.381,-0.389)
O6: (58.933,124.895,4.508)
O4': (53.529,125.205,0.419)
C8: (55.634,126.125,2.071)
C2: (56.394,122.422,4.268)
C6: (57.867,124.381,4.163)
C5: (56.855,124.923,3.332)
C4: (55.740,124.159,3.059)
P: (54.756,129.166,-0.668)
C4': (52.453,126.183,0.459)
C2': (52.505,125.090,2.554)
O2': (51.399,124.222,2.421)
N1: (57.541,123.100,4.598)
N2: (56.258,121.194,4.787)
N3: (55.447,122.912,3.487)
N7: (56.773,126.160,2.705)
N9: (54.955,124.939,2.244)
O5': (53.976,128.052,0.164)
O3': (50.998,127.015,2.239)
C4: (53.709,122.638,7.241)
N3: (53.034,121.528,7.696)
OP1: (61.051,121.607,8.380)
OP2: (59.542,122.062,6.354)
C2: (53.546,120.485,8.426)
C1': (55.488,119.532,9.567)
C3': (57.065,118.153,8.467)
O5': (58.900,120.365,8.012)
O4': (56.786,119.939,9.964)
C5': (59.060,119.586,9.215)
P: (59.692,121.731,7.792)
C4': (57.751,118.924,9.583)
C2': (55.607,118.152,8.911)
O2': (55.322,117.158,9.877)
N1: (54.892,120.591,8.734)
O4: (53.090,123.512,6.630)
O2: (52.857,119.537,8.769)
C6: (55.634,121.668,8.287)
C5: (55.103,122.666,7.573)
O3': (57.599,116.836,8.363)
N3: (53.034,121.528,7.696)
OP1: (61.051,121.607,8.380)
OP2: (59.542,122.062,6.354)
C2: (53.546,120.485,8.426)
C1': (55.488,119.532,9.567)
C3': (57.065,118.153,8.467)
O5': (58.900,120.365,8.012)
O4': (56.786,119.939,9.964)
C5': (59.060,119.586,9.215)
P: (59.692,121.731,7.792)
C4': (57.751,118.924,9.583)
C2': (55.607,118.152,8.911)
O2': (55.322,117.158,9.877)
N1: (54.892,120.591,8.734)
O4: (53.090,123.512,6.630)
O2: (52.857,119.537,8.769)
C6: (55.634,121.668,8.287)
C5: (55.103,122.666,7.573)
O3': (57.599,116.836,8.363)
Image (generated by PyMOL):