Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIO:X63:X27
Extra
PDB:
ATOM 1 O3' U A 62 1.412 59.454 34.954 1.00 51.04 O
ATOM 2 P G A 63 2.771 58.843 35.544 1.00 49.40 P
ATOM 3 OP1 G A 63 2.472 58.319 36.896 1.00 49.15 O
ATOM 4 OP2 G A 63 3.858 59.833 35.351 1.00 48.87 O
ATOM 5 O5' G A 63 3.075 57.616 34.558 1.00 47.64 O
ATOM 6 C5' G A 63 2.143 56.547 34.400 1.00 44.31 C
ATOM 7 C4' G A 63 2.359 55.825 33.080 1.00 41.78 C
ATOM 8 O4' G A 63 2.270 56.744 31.961 1.00 40.54 O
ATOM 9 C3' G A 63 3.739 55.205 32.894 1.00 40.45 C
ATOM 10 O3' G A 63 3.908 54.009 33.640 1.00 38.71 O
ATOM 11 C2' G A 63 3.757 54.993 31.383 1.00 40.02 C
ATOM 12 O2' G A 63 2.988 53.881 30.963 1.00 40.31 O
ATOM 13 C1' G A 63 3.133 56.310 30.919 1.00 39.09 C
ATOM 14 N9 G A 63 4.147 57.334 30.663 1.00 37.66 N
ATOM 15 C8 G A 63 4.594 58.296 31.539 1.00 37.00 C
ATOM 16 N7 G A 63 5.514 59.074 31.040 1.00 36.93 N
ATOM 17 C5 G A 63 5.698 58.593 29.753 1.00 36.47 C
ATOM 18 C6 G A 63 6.575 59.039 28.737 1.00 36.25 C
ATOM 19 O6 G A 63 7.380 59.976 28.790 1.00 37.11 O
ATOM 20 N1 G A 63 6.454 58.287 27.568 1.00 36.20 N
ATOM 21 C2 G A 63 5.593 57.224 27.408 1.00 36.05 C
ATOM 22 N2 G A 63 5.617 56.617 26.213 1.00 35.93 N
ATOM 23 N3 G A 63 4.766 56.791 28.356 1.00 36.33 N
ATOM 24 C4 G A 63 4.867 57.521 29.501 1.00 36.94 C
ATOM 25 P A A 64 5.370 53.668 34.196 1.00 38.17 P
ATOM 26 OP1 A A 64 5.193 52.712 35.316 1.00 37.75 O
ATOM 27 OP2 A A 64 6.114 54.930 34.435 1.00 37.55 O
ATOM 28 O5' A A 64 6.048 52.961 32.918 1.00 36.14 O
TER
ATOM 1 O3' G B 26 10.412 58.359 25.879 1.00 36.38 O
ATOM 2 P U B 27 9.442 59.025 24.789 1.00 37.39 P
ATOM 3 OP1 U B 27 10.152 60.183 24.199 1.00 37.47 O
ATOM 4 OP2 U B 27 8.112 59.178 25.428 1.00 36.82 O
ATOM 5 O5' U B 27 9.257 57.908 23.654 1.00 37.08 O
ATOM 6 C5' U B 27 10.345 57.273 22.990 1.00 36.27 C
ATOM 7 C4' U B 27 10.010 55.820 22.676 1.00 35.87 C
ATOM 8 O4' U B 27 10.358 54.990 23.817 1.00 34.44 O
ATOM 9 C3' U B 27 8.541 55.482 22.418 1.00 35.79 C
ATOM 10 O3' U B 27 8.162 55.752 21.067 1.00 37.46 O
ATOM 11 C2' U B 27 8.514 53.986 22.711 1.00 34.56 C
ATOM 12 O2' U B 27 9.033 53.210 21.645 1.00 34.28 O
ATOM 13 C1' U B 27 9.456 53.897 23.909 1.00 33.42 C
ATOM 14 N1 U B 27 8.809 53.881 25.277 1.00 32.14 N
ATOM 15 C2 U B 27 8.024 52.807 25.680 1.00 31.17 C
ATOM 16 O2 U B 27 7.779 51.833 24.993 1.00 30.36 O
ATOM 17 N3 U B 27 7.507 52.914 26.950 1.00 30.92 N
ATOM 18 C4 U B 27 7.693 53.951 27.849 1.00 31.28 C
ATOM 19 O4 U B 27 7.165 53.901 28.954 1.00 32.09 O
ATOM 20 C5 U B 27 8.523 55.027 27.373 1.00 31.32 C
ATOM 21 C6 U B 27 9.034 54.949 26.135 1.00 32.07 C
ATOM 22 P A B 28 6.663 56.197 20.687 1.00 38.22 P
ATOM 23 OP1 A B 28 6.662 56.500 19.237 1.00 38.32 O
ATOM 24 OP2 A B 28 6.235 57.226 21.665 1.00 37.69 O
ATOM 25 O5' A B 28 5.771 54.894 20.933 1.00 38.03 O
TER
ATOM 2 P G A 63 2.771 58.843 35.544 1.00 49.40 P
ATOM 3 OP1 G A 63 2.472 58.319 36.896 1.00 49.15 O
ATOM 4 OP2 G A 63 3.858 59.833 35.351 1.00 48.87 O
ATOM 5 O5' G A 63 3.075 57.616 34.558 1.00 47.64 O
ATOM 6 C5' G A 63 2.143 56.547 34.400 1.00 44.31 C
ATOM 7 C4' G A 63 2.359 55.825 33.080 1.00 41.78 C
ATOM 8 O4' G A 63 2.270 56.744 31.961 1.00 40.54 O
ATOM 9 C3' G A 63 3.739 55.205 32.894 1.00 40.45 C
ATOM 10 O3' G A 63 3.908 54.009 33.640 1.00 38.71 O
ATOM 11 C2' G A 63 3.757 54.993 31.383 1.00 40.02 C
ATOM 12 O2' G A 63 2.988 53.881 30.963 1.00 40.31 O
ATOM 13 C1' G A 63 3.133 56.310 30.919 1.00 39.09 C
ATOM 14 N9 G A 63 4.147 57.334 30.663 1.00 37.66 N
ATOM 15 C8 G A 63 4.594 58.296 31.539 1.00 37.00 C
ATOM 16 N7 G A 63 5.514 59.074 31.040 1.00 36.93 N
ATOM 17 C5 G A 63 5.698 58.593 29.753 1.00 36.47 C
ATOM 18 C6 G A 63 6.575 59.039 28.737 1.00 36.25 C
ATOM 19 O6 G A 63 7.380 59.976 28.790 1.00 37.11 O
ATOM 20 N1 G A 63 6.454 58.287 27.568 1.00 36.20 N
ATOM 21 C2 G A 63 5.593 57.224 27.408 1.00 36.05 C
ATOM 22 N2 G A 63 5.617 56.617 26.213 1.00 35.93 N
ATOM 23 N3 G A 63 4.766 56.791 28.356 1.00 36.33 N
ATOM 24 C4 G A 63 4.867 57.521 29.501 1.00 36.94 C
ATOM 25 P A A 64 5.370 53.668 34.196 1.00 38.17 P
ATOM 26 OP1 A A 64 5.193 52.712 35.316 1.00 37.75 O
ATOM 27 OP2 A A 64 6.114 54.930 34.435 1.00 37.55 O
ATOM 28 O5' A A 64 6.048 52.961 32.918 1.00 36.14 O
TER
ATOM 1 O3' G B 26 10.412 58.359 25.879 1.00 36.38 O
ATOM 2 P U B 27 9.442 59.025 24.789 1.00 37.39 P
ATOM 3 OP1 U B 27 10.152 60.183 24.199 1.00 37.47 O
ATOM 4 OP2 U B 27 8.112 59.178 25.428 1.00 36.82 O
ATOM 5 O5' U B 27 9.257 57.908 23.654 1.00 37.08 O
ATOM 6 C5' U B 27 10.345 57.273 22.990 1.00 36.27 C
ATOM 7 C4' U B 27 10.010 55.820 22.676 1.00 35.87 C
ATOM 8 O4' U B 27 10.358 54.990 23.817 1.00 34.44 O
ATOM 9 C3' U B 27 8.541 55.482 22.418 1.00 35.79 C
ATOM 10 O3' U B 27 8.162 55.752 21.067 1.00 37.46 O
ATOM 11 C2' U B 27 8.514 53.986 22.711 1.00 34.56 C
ATOM 12 O2' U B 27 9.033 53.210 21.645 1.00 34.28 O
ATOM 13 C1' U B 27 9.456 53.897 23.909 1.00 33.42 C
ATOM 14 N1 U B 27 8.809 53.881 25.277 1.00 32.14 N
ATOM 15 C2 U B 27 8.024 52.807 25.680 1.00 31.17 C
ATOM 16 O2 U B 27 7.779 51.833 24.993 1.00 30.36 O
ATOM 17 N3 U B 27 7.507 52.914 26.950 1.00 30.92 N
ATOM 18 C4 U B 27 7.693 53.951 27.849 1.00 31.28 C
ATOM 19 O4 U B 27 7.165 53.901 28.954 1.00 32.09 O
ATOM 20 C5 U B 27 8.523 55.027 27.373 1.00 31.32 C
ATOM 21 C6 U B 27 9.034 54.949 26.135 1.00 32.07 C
ATOM 22 P A B 28 6.663 56.197 20.687 1.00 38.22 P
ATOM 23 OP1 A B 28 6.662 56.500 19.237 1.00 38.32 O
ATOM 24 OP2 A B 28 6.235 57.226 21.665 1.00 37.69 O
ATOM 25 O5' A B 28 5.771 54.894 20.933 1.00 38.03 O
TER
Atoms:
OP1: (2.472,58.319,36.896)
OP2: (3.858,59.833,35.351)
C3': (3.739,55.205,32.894)
C1': (3.133,56.310,30.919)
C5': (2.143,56.547,34.400)
O6: (7.380,59.976,28.790)
O4': (2.270,56.744,31.961)
C8: (4.594,58.296,31.539)
C2: (5.593,57.224,27.408)
C6: (6.575,59.039,28.737)
C5: (5.698,58.593,29.753)
C4: (4.867,57.521,29.501)
P: (2.771,58.843,35.544)
C4': (2.359,55.825,33.080)
C2': (3.757,54.993,31.383)
O2': (2.988,53.881,30.963)
N1: (6.454,58.287,27.568)
N2: (5.617,56.617,26.213)
N3: (4.766,56.791,28.356)
N7: (5.514,59.074,31.040)
N9: (4.147,57.334,30.663)
O5': (3.075,57.616,34.558)
O3': (3.908,54.009,33.640)
OP2: (3.858,59.833,35.351)
C3': (3.739,55.205,32.894)
C1': (3.133,56.310,30.919)
C5': (2.143,56.547,34.400)
O6: (7.380,59.976,28.790)
O4': (2.270,56.744,31.961)
C8: (4.594,58.296,31.539)
C2: (5.593,57.224,27.408)
C6: (6.575,59.039,28.737)
C5: (5.698,58.593,29.753)
C4: (4.867,57.521,29.501)
P: (2.771,58.843,35.544)
C4': (2.359,55.825,33.080)
C2': (3.757,54.993,31.383)
O2': (2.988,53.881,30.963)
N1: (6.454,58.287,27.568)
N2: (5.617,56.617,26.213)
N3: (4.766,56.791,28.356)
N7: (5.514,59.074,31.040)
N9: (4.147,57.334,30.663)
O5': (3.075,57.616,34.558)
O3': (3.908,54.009,33.640)
C4: (7.693,53.951,27.849)
N3: (7.507,52.914,26.950)
OP1: (10.152,60.183,24.199)
OP2: (8.112,59.178,25.428)
C2: (8.024,52.807,25.680)
C1': (9.456,53.897,23.909)
C3': (8.541,55.482,22.418)
O5': (9.257,57.908,23.654)
O4': (10.358,54.990,23.817)
C5': (10.345,57.273,22.990)
P: (9.442,59.025,24.789)
C4': (10.010,55.820,22.676)
C2': (8.514,53.986,22.711)
O2': (9.033,53.210,21.645)
N1: (8.809,53.881,25.277)
O4: (7.165,53.901,28.954)
O2: (7.779,51.833,24.993)
C6: (9.034,54.949,26.135)
C5: (8.523,55.027,27.373)
O3': (8.162,55.752,21.067)
N3: (7.507,52.914,26.950)
OP1: (10.152,60.183,24.199)
OP2: (8.112,59.178,25.428)
C2: (8.024,52.807,25.680)
C1': (9.456,53.897,23.909)
C3': (8.541,55.482,22.418)
O5': (9.257,57.908,23.654)
O4': (10.358,54.990,23.817)
C5': (10.345,57.273,22.990)
P: (9.442,59.025,24.789)
C4': (10.010,55.820,22.676)
C2': (8.514,53.986,22.711)
O2': (9.033,53.210,21.645)
N1: (8.809,53.881,25.277)
O4: (7.165,53.901,28.954)
O2: (7.779,51.833,24.993)
C6: (9.034,54.949,26.135)
C5: (8.523,55.027,27.373)
O3': (8.162,55.752,21.067)
Image (generated by PyMOL):