ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:12783:12775

Extra

PDB:
ATOM 1 O3' G A2782 -13.806 31.812 23.103 1.00 78.18 O
ATOM 2 P G A2783 -12.619 32.756 23.591 1.00 68.89 P
ATOM 3 OP1 G A2783 -11.797 31.960 24.554 1.00 68.16 O
ATOM 4 OP2 G A2783 -13.241 34.037 24.050 1.00 69.29 O
ATOM 5 O5' G A2783 -11.793 33.023 22.244 1.00 69.12 O
ATOM 6 C5' G A2783 -10.878 32.069 21.721 1.00 68.75 C
ATOM 7 C4' G A2783 -10.053 32.670 20.612 1.00 69.01 C
ATOM 8 O4' G A2783 -10.849 32.765 19.401 1.00 69.65 O
ATOM 9 C3' G A2783 -9.612 34.090 20.833 1.00 69.20 C
ATOM 10 O3' G A2783 -8.508 34.206 21.680 1.00 68.66 O
ATOM 11 C2' G A2783 -9.374 34.578 19.412 1.00 69.70 C
ATOM 12 O2' G A2783 -8.231 33.975 18.844 1.00 69.39 O
ATOM 13 C1' G A2783 -10.579 33.986 18.738 1.00 70.10 C
ATOM 14 N9 G A2783 -11.736 34.872 18.893 1.00 70.64 N
ATOM 15 C8 G A2783 -12.591 34.929 19.956 1.00 70.57 C
ATOM 16 N7 G A2783 -13.494 35.857 19.845 1.00 71.14 N
ATOM 17 C5 G A2783 -13.184 36.459 18.638 1.00 71.61 C
ATOM 18 C6 G A2783 -13.828 37.526 17.971 1.00 72.33 C
ATOM 19 O6 G A2783 -14.819 38.152 18.366 1.00 72.70 O
ATOM 20 N1 G A2783 -13.189 37.820 16.761 1.00 72.62 N
ATOM 21 C2 G A2783 -12.097 37.164 16.275 1.00 72.26 C
ATOM 22 N2 G A2783 -11.620 37.570 15.111 1.00 72.63 N
ATOM 23 N3 G A2783 -11.506 36.176 16.879 1.00 71.59 N
ATOM 24 C4 G A2783 -12.093 35.874 18.047 1.00 71.30 C
ATOM 25 P A A2784 -8.029 35.659 22.141 1.00 62.15 P
ATOM 26 OP1 A A2784 -7.038 35.475 23.231 1.00 61.51 O
ATOM 27 OP2 A A2784 -9.268 36.466 22.397 1.00 62.66 O
ATOM 28 O5' A A2784 -7.297 36.194 20.847 1.00 62.49 O
TER

ATOM 1 O3' G B2774 -13.561 41.802 15.640 1.00 73.93 O
ATOM 2 P U B2775 -14.298 40.965 14.471 1.00 67.87 P
ATOM 3 OP1 U B2775 -15.489 41.754 14.088 1.00 68.64 O
ATOM 4 OP2 U B2775 -14.509 39.592 14.958 1.00 67.34 O
ATOM 5 O5' U B2775 -13.233 40.968 13.293 1.00 67.95 O
ATOM 6 C5' U B2775 -12.738 42.189 12.785 1.00 68.37 C
ATOM 7 C4' U B2775 -11.290 42.081 12.353 1.00 68.04 C
ATOM 8 O4' U B2775 -10.392 42.346 13.469 1.00 67.46 O
ATOM 9 C3' U B2775 -10.858 40.742 11.815 1.00 67.68 C
ATOM 10 O3' U B2775 -11.183 40.606 10.458 1.00 68.24 O
ATOM 11 C2' U B2775 -9.355 40.735 12.079 1.00 67.14 C
ATOM 12 O2' U B2775 -8.668 41.411 11.044 1.00 67.52 O
ATOM 13 C1' U B2775 -9.234 41.572 13.354 1.00 66.91 C
ATOM 14 N1 U B2775 -9.121 40.760 14.566 1.00 66.20 N
ATOM 15 C2 U B2775 -7.951 40.121 14.952 1.00 65.54 C
ATOM 16 O2 U B2775 -6.919 40.106 14.300 1.00 65.46 O
ATOM 17 N3 U B2775 -8.016 39.460 16.151 1.00 64.95 N
ATOM 18 C4 U B2775 -9.101 39.373 16.990 1.00 64.96 C
ATOM 19 O4 U B2775 -9.050 38.726 18.047 1.00 64.40 O
ATOM 20 C5 U B2775 -10.244 40.083 16.518 1.00 65.66 C
ATOM 21 C6 U B2775 -10.215 40.739 15.364 1.00 66.25 C
ATOM 22 P A B2776 -11.682 39.216 9.889 1.00 68.14 P
ATOM 23 OP1 A B2776 -12.228 39.471 8.541 1.00 68.89 O
ATOM 24 OP2 A B2776 -12.549 38.596 10.918 1.00 67.83 O
ATOM 25 O5' A B2776 -10.354 38.417 9.751 1.00 67.55 O
TER

Atoms:
OP1: (-11.797,31.960,24.554)
OP2: (-13.241,34.037,24.050)
C3': (-9.612,34.090,20.833)
C1': (-10.579,33.986,18.738)
C5': (-10.878,32.069,21.721)
O6: (-14.819,38.152,18.366)
O4': (-10.849,32.765,19.401)
C8: (-12.591,34.929,19.956)
C2: (-12.097,37.164,16.275)
C6: (-13.828,37.526,17.971)
C5: (-13.184,36.459,18.638)
C4: (-12.093,35.874,18.047)
P: (-12.619,32.756,23.591)
C4': (-10.053,32.670,20.612)
C2': (-9.374,34.578,19.412)
O2': (-8.231,33.975,18.844)
N1: (-13.189,37.820,16.761)
N2: (-11.620,37.570,15.111)
N3: (-11.506,36.176,16.879)
N7: (-13.494,35.857,19.845)
N9: (-11.736,34.872,18.893)
O5': (-11.793,33.023,22.244)
O3': (-8.508,34.206,21.680)
C4: (-9.101,39.373,16.990)
N3: (-8.016,39.460,16.151)
OP1: (-15.489,41.754,14.088)
OP2: (-14.509,39.592,14.958)
C2: (-7.951,40.121,14.952)
C1': (-9.234,41.572,13.354)
C3': (-10.858,40.742,11.815)
O5': (-13.233,40.968,13.293)
O4': (-10.392,42.346,13.469)
C5': (-12.738,42.189,12.785)
P: (-14.298,40.965,14.471)
C4': (-11.290,42.081,12.353)
C2': (-9.355,40.735,12.079)
O2': (-8.668,41.411,11.044)
N1: (-9.121,40.760,14.566)
O4: (-9.050,38.726,18.047)
O2: (-6.919,40.106,14.300)
C6: (-10.215,40.739,15.364)
C5: (-10.244,40.083,16.518)
O3': (-11.183,40.606,10.458)
Image (generated by PyMOL):
PyMOL image
show in jmol