Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:195:184
Extra
PDB:
ATOM 1 O3' U A 94 49.628 -35.229 95.860 1.00 35.82 O
ATOM 2 P G A 95 51.118 -35.177 96.529 1.00 33.62 P
ATOM 3 OP1 G A 95 51.002 -34.346 97.733 1.00 33.72 O
ATOM 4 OP2 G A 95 52.096 -34.754 95.464 1.00 33.42 O
ATOM 5 O5' G A 95 51.343 -36.689 96.932 1.00 33.96 O
ATOM 6 C5' G A 95 50.555 -37.268 97.932 1.00 34.20 C
ATOM 7 C4' G A 95 50.823 -38.721 98.039 1.00 34.50 C
ATOM 8 O4' G A 95 50.300 -39.406 96.877 1.00 34.36 O
ATOM 9 C3' G A 95 52.287 -39.123 98.099 1.00 34.70 C
ATOM 10 O3' G A 95 52.820 -39.003 99.402 1.00 34.99 O
ATOM 11 C2' G A 95 52.244 -40.559 97.612 1.00 34.86 C
ATOM 12 O2' G A 95 51.850 -41.433 98.662 1.00 35.22 O
ATOM 13 C1' G A 95 51.123 -40.499 96.560 1.00 34.56 C
ATOM 14 N9 G A 95 51.667 -40.263 95.232 1.00 34.31 N
ATOM 15 C8 G A 95 51.780 -39.042 94.641 1.00 33.98 C
ATOM 16 N7 G A 95 52.312 -39.144 93.469 1.00 33.83 N
ATOM 17 C5 G A 95 52.570 -40.491 93.328 1.00 34.08 C
ATOM 18 C6 G A 95 53.148 -41.186 92.257 1.00 34.08 C
ATOM 19 O6 G A 95 53.574 -40.775 91.197 1.00 33.86 O
ATOM 20 N1 G A 95 53.222 -42.521 92.499 1.00 34.39 N
ATOM 21 C2 G A 95 52.773 -43.108 93.637 1.00 34.68 C
ATOM 22 N2 G A 95 52.944 -44.433 93.590 1.00 34.96 N
ATOM 23 N3 G A 95 52.230 -42.489 94.675 1.00 34.69 N
ATOM 24 C4 G A 95 52.180 -41.195 94.424 1.00 34.38 C
ATOM 25 P A A 96 54.219 -38.237 99.659 1.00 38.91 P
ATOM 26 OP1 A A 96 53.891 -37.019 100.482 1.00 38.85 O
ATOM 27 OP2 A A 96 54.861 -38.070 98.380 1.00 38.67 O
ATOM 28 O5' A A 96 55.041 -39.313 100.492 1.00 39.36 O
TER
ATOM 1 O3' G B 83 56.458 -43.422 90.397 1.00 42.04 O
ATOM 2 P U B 84 55.220 -44.049 89.606 1.00 34.36 P
ATOM 3 OP1 U B 84 55.517 -43.968 88.163 1.00 34.16 O
ATOM 4 OP2 U B 84 54.009 -43.343 90.105 1.00 34.18 O
ATOM 5 O5' U B 84 55.210 -45.557 90.084 1.00 34.77 O
ATOM 6 C5' U B 84 56.352 -46.356 90.067 1.00 35.05 C
ATOM 7 C4' U B 84 56.498 -47.177 91.342 1.00 35.46 C
ATOM 8 O4' U B 84 57.144 -46.387 92.357 1.00 35.50 O
ATOM 9 C3' U B 84 55.246 -47.648 92.007 1.00 35.56 C
ATOM 10 O3' U B 84 54.713 -48.807 91.397 1.00 35.70 O
ATOM 11 C2' U B 84 55.716 -47.883 93.442 1.00 35.90 C
ATOM 12 O2' U B 84 56.371 -49.128 93.548 1.00 36.29 O
ATOM 13 C1' U B 84 56.758 -46.799 93.620 1.00 35.78 C
ATOM 14 N1 U B 84 56.270 -45.606 94.355 1.00 35.59 N
ATOM 15 C2 U B 84 55.812 -45.710 95.648 1.00 35.80 C
ATOM 16 O2 U B 84 55.707 -46.749 96.199 1.00 36.14 O
ATOM 17 N3 U B 84 55.417 -44.592 96.287 1.00 35.64 N
ATOM 18 C4 U B 84 55.475 -43.363 95.741 1.00 35.28 C
ATOM 19 O4 U B 84 55.099 -42.467 96.447 1.00 35.19 O
ATOM 20 C5 U B 84 55.984 -43.260 94.407 1.00 35.05 C
ATOM 21 C6 U B 84 56.359 -44.359 93.766 1.00 35.21 C
ATOM 22 P A B 85 53.141 -49.145 91.524 1.00 37.97 P
ATOM 23 OP1 A B 85 52.879 -50.296 90.639 1.00 38.11 O
ATOM 24 OP2 A B 85 52.424 -47.896 91.291 1.00 37.57 O
ATOM 25 O5' A B 85 52.947 -49.585 93.040 1.00 38.32 O
TER
ATOM 2 P G A 95 51.118 -35.177 96.529 1.00 33.62 P
ATOM 3 OP1 G A 95 51.002 -34.346 97.733 1.00 33.72 O
ATOM 4 OP2 G A 95 52.096 -34.754 95.464 1.00 33.42 O
ATOM 5 O5' G A 95 51.343 -36.689 96.932 1.00 33.96 O
ATOM 6 C5' G A 95 50.555 -37.268 97.932 1.00 34.20 C
ATOM 7 C4' G A 95 50.823 -38.721 98.039 1.00 34.50 C
ATOM 8 O4' G A 95 50.300 -39.406 96.877 1.00 34.36 O
ATOM 9 C3' G A 95 52.287 -39.123 98.099 1.00 34.70 C
ATOM 10 O3' G A 95 52.820 -39.003 99.402 1.00 34.99 O
ATOM 11 C2' G A 95 52.244 -40.559 97.612 1.00 34.86 C
ATOM 12 O2' G A 95 51.850 -41.433 98.662 1.00 35.22 O
ATOM 13 C1' G A 95 51.123 -40.499 96.560 1.00 34.56 C
ATOM 14 N9 G A 95 51.667 -40.263 95.232 1.00 34.31 N
ATOM 15 C8 G A 95 51.780 -39.042 94.641 1.00 33.98 C
ATOM 16 N7 G A 95 52.312 -39.144 93.469 1.00 33.83 N
ATOM 17 C5 G A 95 52.570 -40.491 93.328 1.00 34.08 C
ATOM 18 C6 G A 95 53.148 -41.186 92.257 1.00 34.08 C
ATOM 19 O6 G A 95 53.574 -40.775 91.197 1.00 33.86 O
ATOM 20 N1 G A 95 53.222 -42.521 92.499 1.00 34.39 N
ATOM 21 C2 G A 95 52.773 -43.108 93.637 1.00 34.68 C
ATOM 22 N2 G A 95 52.944 -44.433 93.590 1.00 34.96 N
ATOM 23 N3 G A 95 52.230 -42.489 94.675 1.00 34.69 N
ATOM 24 C4 G A 95 52.180 -41.195 94.424 1.00 34.38 C
ATOM 25 P A A 96 54.219 -38.237 99.659 1.00 38.91 P
ATOM 26 OP1 A A 96 53.891 -37.019 100.482 1.00 38.85 O
ATOM 27 OP2 A A 96 54.861 -38.070 98.380 1.00 38.67 O
ATOM 28 O5' A A 96 55.041 -39.313 100.492 1.00 39.36 O
TER
ATOM 1 O3' G B 83 56.458 -43.422 90.397 1.00 42.04 O
ATOM 2 P U B 84 55.220 -44.049 89.606 1.00 34.36 P
ATOM 3 OP1 U B 84 55.517 -43.968 88.163 1.00 34.16 O
ATOM 4 OP2 U B 84 54.009 -43.343 90.105 1.00 34.18 O
ATOM 5 O5' U B 84 55.210 -45.557 90.084 1.00 34.77 O
ATOM 6 C5' U B 84 56.352 -46.356 90.067 1.00 35.05 C
ATOM 7 C4' U B 84 56.498 -47.177 91.342 1.00 35.46 C
ATOM 8 O4' U B 84 57.144 -46.387 92.357 1.00 35.50 O
ATOM 9 C3' U B 84 55.246 -47.648 92.007 1.00 35.56 C
ATOM 10 O3' U B 84 54.713 -48.807 91.397 1.00 35.70 O
ATOM 11 C2' U B 84 55.716 -47.883 93.442 1.00 35.90 C
ATOM 12 O2' U B 84 56.371 -49.128 93.548 1.00 36.29 O
ATOM 13 C1' U B 84 56.758 -46.799 93.620 1.00 35.78 C
ATOM 14 N1 U B 84 56.270 -45.606 94.355 1.00 35.59 N
ATOM 15 C2 U B 84 55.812 -45.710 95.648 1.00 35.80 C
ATOM 16 O2 U B 84 55.707 -46.749 96.199 1.00 36.14 O
ATOM 17 N3 U B 84 55.417 -44.592 96.287 1.00 35.64 N
ATOM 18 C4 U B 84 55.475 -43.363 95.741 1.00 35.28 C
ATOM 19 O4 U B 84 55.099 -42.467 96.447 1.00 35.19 O
ATOM 20 C5 U B 84 55.984 -43.260 94.407 1.00 35.05 C
ATOM 21 C6 U B 84 56.359 -44.359 93.766 1.00 35.21 C
ATOM 22 P A B 85 53.141 -49.145 91.524 1.00 37.97 P
ATOM 23 OP1 A B 85 52.879 -50.296 90.639 1.00 38.11 O
ATOM 24 OP2 A B 85 52.424 -47.896 91.291 1.00 37.57 O
ATOM 25 O5' A B 85 52.947 -49.585 93.040 1.00 38.32 O
TER
Atoms:
OP1: (51.002,-34.346,97.733)
OP2: (52.096,-34.754,95.464)
C3': (52.287,-39.123,98.099)
C1': (51.123,-40.499,96.560)
C5': (50.555,-37.268,97.932)
O6: (53.574,-40.775,91.197)
O4': (50.300,-39.406,96.877)
C8: (51.780,-39.042,94.641)
C2: (52.773,-43.108,93.637)
C6: (53.148,-41.186,92.257)
C5: (52.570,-40.491,93.328)
C4: (52.180,-41.195,94.424)
P: (51.118,-35.177,96.529)
C4': (50.823,-38.721,98.039)
C2': (52.244,-40.559,97.612)
O2': (51.850,-41.433,98.662)
N1: (53.222,-42.521,92.499)
N2: (52.944,-44.433,93.590)
N3: (52.230,-42.489,94.675)
N7: (52.312,-39.144,93.469)
N9: (51.667,-40.263,95.232)
O5': (51.343,-36.689,96.932)
O3': (52.820,-39.003,99.402)
OP2: (52.096,-34.754,95.464)
C3': (52.287,-39.123,98.099)
C1': (51.123,-40.499,96.560)
C5': (50.555,-37.268,97.932)
O6: (53.574,-40.775,91.197)
O4': (50.300,-39.406,96.877)
C8: (51.780,-39.042,94.641)
C2: (52.773,-43.108,93.637)
C6: (53.148,-41.186,92.257)
C5: (52.570,-40.491,93.328)
C4: (52.180,-41.195,94.424)
P: (51.118,-35.177,96.529)
C4': (50.823,-38.721,98.039)
C2': (52.244,-40.559,97.612)
O2': (51.850,-41.433,98.662)
N1: (53.222,-42.521,92.499)
N2: (52.944,-44.433,93.590)
N3: (52.230,-42.489,94.675)
N7: (52.312,-39.144,93.469)
N9: (51.667,-40.263,95.232)
O5': (51.343,-36.689,96.932)
O3': (52.820,-39.003,99.402)
C4: (55.475,-43.363,95.741)
N3: (55.417,-44.592,96.287)
OP1: (55.517,-43.968,88.163)
OP2: (54.009,-43.343,90.105)
C2: (55.812,-45.710,95.648)
C1': (56.758,-46.799,93.620)
C3': (55.246,-47.648,92.007)
O5': (55.210,-45.557,90.084)
O4': (57.144,-46.387,92.357)
C5': (56.352,-46.356,90.067)
P: (55.220,-44.049,89.606)
C4': (56.498,-47.177,91.342)
C2': (55.716,-47.883,93.442)
O2': (56.371,-49.128,93.548)
N1: (56.270,-45.606,94.355)
O4: (55.099,-42.467,96.447)
O2: (55.707,-46.749,96.199)
C6: (56.359,-44.359,93.766)
C5: (55.984,-43.260,94.407)
O3': (54.713,-48.807,91.397)
N3: (55.417,-44.592,96.287)
OP1: (55.517,-43.968,88.163)
OP2: (54.009,-43.343,90.105)
C2: (55.812,-45.710,95.648)
C1': (56.758,-46.799,93.620)
C3': (55.246,-47.648,92.007)
O5': (55.210,-45.557,90.084)
O4': (57.144,-46.387,92.357)
C5': (56.352,-46.356,90.067)
P: (55.220,-44.049,89.606)
C4': (56.498,-47.177,91.342)
C2': (55.716,-47.883,93.442)
O2': (56.371,-49.128,93.548)
N1: (56.270,-45.606,94.355)
O4: (55.099,-42.467,96.447)
O2: (55.707,-46.749,96.199)
C6: (56.359,-44.359,93.766)
C5: (55.984,-43.260,94.407)
O3': (54.713,-48.807,91.397)
Image (generated by PyMOL):