ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01842:01804

Extra

PDB:
ATOM 1 O3' U A1841 108.984 126.096 88.834 1.00 38.64 O
ATOM 2 P G A1842 108.127 127.265 89.524 1.00 40.62 P
ATOM 3 OP1 G A1842 108.173 127.032 90.989 1.00 39.80 O
ATOM 4 OP2 G A1842 106.811 127.372 88.837 1.00 39.54 O
ATOM 5 O5' G A1842 108.917 128.607 89.193 1.00 41.83 O
ATOM 6 C5' G A1842 110.277 128.812 89.623 1.00 40.91 C
ATOM 7 C4' G A1842 110.795 130.120 89.072 1.00 40.01 C
ATOM 8 O4' G A1842 110.500 130.165 87.643 1.00 41.50 O
ATOM 9 C3' G A1842 110.157 131.374 89.659 1.00 38.92 C
ATOM 10 O3' G A1842 111.082 132.447 89.541 1.00 41.75 O
ATOM 11 C2' G A1842 109.013 131.640 88.687 1.00 38.30 C
ATOM 12 O2' G A1842 108.596 132.988 88.665 1.00 35.91 O
ATOM 13 C1' G A1842 109.673 131.275 87.362 1.00 39.28 C
ATOM 14 N9 G A1842 108.731 130.908 86.312 1.00 39.58 N
ATOM 15 C8 G A1842 107.824 129.878 86.336 1.00 40.89 C
ATOM 16 N7 G A1842 107.080 129.825 85.263 1.00 41.67 N
ATOM 17 C5 G A1842 107.527 130.880 84.479 1.00 39.97 C
ATOM 18 C6 G A1842 107.080 131.340 83.208 1.00 39.57 C
ATOM 19 O6 G A1842 106.167 130.901 82.507 1.00 37.37 O
ATOM 20 N1 G A1842 107.815 132.438 82.775 1.00 39.51 N
ATOM 21 C2 G A1842 108.838 133.026 83.470 1.00 38.20 C
ATOM 22 N2 G A1842 109.419 134.069 82.873 1.00 36.95 N
ATOM 23 N3 G A1842 109.257 132.619 84.659 1.00 38.69 N
ATOM 24 C4 G A1842 108.560 131.548 85.102 1.00 39.61 C
ATOM 25 P A A1843 112.070 132.805 90.752 1.00 42.07 P
ATOM 26 OP1 A A1843 113.226 131.882 90.622 1.00 43.05 O
ATOM 27 OP2 A A1843 111.323 132.883 92.034 1.00 42.24 O
ATOM 28 O5' A A1843 112.573 134.270 90.400 1.00 40.11 O
TER

ATOM 1 O3' A B1803 104.663 135.422 80.008 1.00 31.15 O
ATOM 2 P U B1804 106.152 134.850 80.051 1.00 31.96 P
ATOM 3 OP1 U B1804 106.628 134.727 78.646 1.00 32.86 O
ATOM 4 OP2 U B1804 106.179 133.663 80.940 1.00 30.78 O
ATOM 5 O5' U B1804 106.953 136.012 80.783 1.00 33.51 O
ATOM 6 C5' U B1804 106.956 137.353 80.261 1.00 33.81 C
ATOM 7 C4' U B1804 107.573 138.292 81.265 1.00 35.18 C
ATOM 8 O4' U B1804 106.733 138.350 82.443 1.00 34.58 O
ATOM 9 C3' U B1804 108.943 137.872 81.777 1.00 35.04 C
ATOM 10 O3' U B1804 109.955 138.393 80.921 1.00 34.94 O
ATOM 11 C2' U B1804 109.005 138.550 83.139 1.00 35.00 C
ATOM 12 O2' U B1804 109.345 139.914 83.000 1.00 34.46 O
ATOM 13 C1' U B1804 107.544 138.464 83.597 1.00 35.39 C
ATOM 14 N1 U B1804 107.183 137.375 84.521 1.00 35.45 N
ATOM 15 C2 U B1804 107.134 137.670 85.870 1.00 35.12 C
ATOM 16 O2 U B1804 107.469 138.744 86.327 1.00 39.05 O
ATOM 17 N3 U B1804 106.685 136.656 86.670 1.00 34.18 N
ATOM 18 C4 U B1804 106.311 135.396 86.279 1.00 35.65 C
ATOM 19 O4 U B1804 105.846 134.623 87.117 1.00 37.04 O
ATOM 20 C5 U B1804 106.442 135.140 84.877 1.00 34.43 C
ATOM 21 C6 U B1804 106.864 136.114 84.066 1.00 34.80 C
ATOM 22 P A B1805 110.801 137.413 79.975 1.00 38.32 P
ATOM 23 OP1 A B1805 110.529 137.794 78.564 1.00 37.20 O
ATOM 24 OP2 A B1805 110.592 136.011 80.410 1.00 37.72 O
ATOM 25 O5' A B1805 112.313 137.805 80.281 1.00 37.24 O
TER

Atoms:
OP1: (108.173,127.032,90.989)
OP2: (106.811,127.372,88.837)
C3': (110.157,131.374,89.659)
C1': (109.673,131.275,87.362)
C5': (110.277,128.812,89.623)
O6: (106.167,130.901,82.507)
O4': (110.500,130.165,87.643)
C8: (107.824,129.878,86.336)
C2: (108.838,133.026,83.470)
C6: (107.080,131.340,83.208)
C5: (107.527,130.880,84.479)
C4: (108.560,131.548,85.102)
P: (108.127,127.265,89.524)
C4': (110.795,130.120,89.072)
C2': (109.013,131.640,88.687)
O2': (108.596,132.988,88.665)
N1: (107.815,132.438,82.775)
N2: (109.419,134.069,82.873)
N3: (109.257,132.619,84.659)
N7: (107.080,129.825,85.263)
N9: (108.731,130.908,86.312)
O5': (108.917,128.607,89.193)
O3': (111.082,132.447,89.541)
C4: (106.311,135.396,86.279)
N3: (106.685,136.656,86.670)
OP1: (106.628,134.727,78.646)
OP2: (106.179,133.663,80.940)
C2: (107.134,137.670,85.870)
C1': (107.544,138.464,83.597)
C3': (108.943,137.872,81.777)
O5': (106.953,136.012,80.783)
O4': (106.733,138.350,82.443)
C5': (106.956,137.353,80.261)
P: (106.152,134.850,80.051)
C4': (107.573,138.292,81.265)
C2': (109.005,138.550,83.139)
O2': (109.345,139.914,83.000)
N1: (107.183,137.375,84.521)
O4: (105.846,134.623,87.117)
O2: (107.469,138.744,86.327)
C6: (106.864,136.114,84.066)
C5: (106.442,135.140,84.877)
O3': (109.955,138.393,80.921)
Image (generated by PyMOL):
PyMOL image
show in jmol