Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0280:0347
Extra
PDB:
ATOM 1 O3' C A 279 54.454 127.885 -1.888 1.00 89.59 O
ATOM 2 P G A 280 53.882 128.720 -0.638 1.00 89.21 P
ATOM 3 OP1 G A 280 52.975 129.768 -1.176 1.00 88.55 O
ATOM 4 OP2 G A 280 55.032 129.112 0.218 1.00 88.82 O
ATOM 5 O5' G A 280 52.990 127.666 0.159 1.00 90.06 O
ATOM 6 C5' G A 280 51.806 127.082 -0.435 1.00 90.13 C
ATOM 7 C4' G A 280 51.418 125.822 0.308 1.00 90.20 C
ATOM 8 O4' G A 280 52.479 124.837 0.163 1.00 90.13 O
ATOM 9 C3' G A 280 51.257 125.979 1.812 1.00 90.55 C
ATOM 10 O3' G A 280 49.975 126.491 2.172 1.00 91.67 O
ATOM 11 C2' G A 280 51.529 124.567 2.315 1.00 89.43 C
ATOM 12 O2' G A 280 50.441 123.684 2.128 1.00 88.86 O
ATOM 13 C1' G A 280 52.672 124.150 1.390 1.00 89.23 C
ATOM 14 N9 G A 280 53.980 124.534 1.918 1.00 88.98 N
ATOM 15 C8 G A 280 54.647 125.720 1.705 1.00 88.99 C
ATOM 16 N7 G A 280 55.796 125.782 2.320 1.00 88.68 N
ATOM 17 C5 G A 280 55.897 124.564 2.979 1.00 89.49 C
ATOM 18 C6 G A 280 56.928 124.053 3.812 1.00 89.44 C
ATOM 19 O6 G A 280 57.992 124.592 4.139 1.00 89.64 O
ATOM 20 N1 G A 280 56.623 122.775 4.275 1.00 88.99 N
ATOM 21 C2 G A 280 55.478 122.077 3.972 1.00 88.54 C
ATOM 22 N2 G A 280 55.368 120.860 4.511 1.00 88.22 N
ATOM 23 N3 G A 280 54.512 122.540 3.197 1.00 88.45 N
ATOM 24 C4 G A 280 54.784 123.780 2.738 1.00 89.15 C
ATOM 25 P A A 281 49.812 127.356 3.522 1.00 92.24 P
ATOM 26 OP1 A A 281 48.489 128.037 3.444 1.00 91.31 O
ATOM 27 OP2 A A 281 51.046 128.169 3.724 1.00 90.89 O
ATOM 28 O5' A A 281 49.755 126.244 4.663 1.00 91.25 O
TER
ATOM 1 O3' G B 346 58.080 122.278 8.137 1.00100.13 O
ATOM 2 P U B 347 59.033 121.133 7.521 1.00 99.88 P
ATOM 3 OP1 U B 347 60.309 121.072 8.287 1.00 99.01 O
ATOM 4 OP2 U B 347 59.070 121.319 6.045 1.00 99.53 O
ATOM 5 O5' U B 347 58.212 119.791 7.777 1.00 99.69 O
ATOM 6 C5' U B 347 58.292 119.089 9.035 1.00 99.57 C
ATOM 7 C4' U B 347 56.957 118.465 9.368 1.00 99.25 C
ATOM 8 O4' U B 347 56.001 119.510 9.676 1.00 98.53 O
ATOM 9 C3' U B 347 56.303 117.676 8.245 1.00 99.85 C
ATOM 10 O3' U B 347 56.820 116.349 8.183 1.00102.51 O
ATOM 11 C2' U B 347 54.827 117.710 8.629 1.00 98.72 C
ATOM 12 O2' U B 347 54.478 116.744 9.599 1.00 98.37 O
ATOM 13 C1' U B 347 54.707 119.104 9.257 1.00 98.09 C
ATOM 14 N1 U B 347 54.117 120.158 8.409 1.00 96.41 N
ATOM 15 C2 U B 347 52.816 119.972 7.961 1.00 95.69 C
ATOM 16 O2 U B 347 52.167 118.963 8.201 1.00 95.42 O
ATOM 17 N3 U B 347 52.303 121.010 7.221 1.00 95.37 N
ATOM 18 C4 U B 347 52.936 122.190 6.885 1.00 94.84 C
ATOM 19 O4 U B 347 52.327 123.038 6.226 1.00 92.86 O
ATOM 20 C5 U B 347 54.284 122.301 7.361 1.00 94.98 C
ATOM 21 C6 U B 347 54.817 121.308 8.084 1.00 95.37 C
ATOM 22 P A B 348 56.901 115.581 6.769 1.00104.49 P
ATOM 23 OP1 A B 348 57.511 114.251 7.060 1.00104.00 O
ATOM 24 OP2 A B 348 57.541 116.476 5.765 1.00103.55 O
ATOM 25 O5' A B 348 55.374 115.375 6.352 1.00102.63 O
TER
ATOM 2 P G A 280 53.882 128.720 -0.638 1.00 89.21 P
ATOM 3 OP1 G A 280 52.975 129.768 -1.176 1.00 88.55 O
ATOM 4 OP2 G A 280 55.032 129.112 0.218 1.00 88.82 O
ATOM 5 O5' G A 280 52.990 127.666 0.159 1.00 90.06 O
ATOM 6 C5' G A 280 51.806 127.082 -0.435 1.00 90.13 C
ATOM 7 C4' G A 280 51.418 125.822 0.308 1.00 90.20 C
ATOM 8 O4' G A 280 52.479 124.837 0.163 1.00 90.13 O
ATOM 9 C3' G A 280 51.257 125.979 1.812 1.00 90.55 C
ATOM 10 O3' G A 280 49.975 126.491 2.172 1.00 91.67 O
ATOM 11 C2' G A 280 51.529 124.567 2.315 1.00 89.43 C
ATOM 12 O2' G A 280 50.441 123.684 2.128 1.00 88.86 O
ATOM 13 C1' G A 280 52.672 124.150 1.390 1.00 89.23 C
ATOM 14 N9 G A 280 53.980 124.534 1.918 1.00 88.98 N
ATOM 15 C8 G A 280 54.647 125.720 1.705 1.00 88.99 C
ATOM 16 N7 G A 280 55.796 125.782 2.320 1.00 88.68 N
ATOM 17 C5 G A 280 55.897 124.564 2.979 1.00 89.49 C
ATOM 18 C6 G A 280 56.928 124.053 3.812 1.00 89.44 C
ATOM 19 O6 G A 280 57.992 124.592 4.139 1.00 89.64 O
ATOM 20 N1 G A 280 56.623 122.775 4.275 1.00 88.99 N
ATOM 21 C2 G A 280 55.478 122.077 3.972 1.00 88.54 C
ATOM 22 N2 G A 280 55.368 120.860 4.511 1.00 88.22 N
ATOM 23 N3 G A 280 54.512 122.540 3.197 1.00 88.45 N
ATOM 24 C4 G A 280 54.784 123.780 2.738 1.00 89.15 C
ATOM 25 P A A 281 49.812 127.356 3.522 1.00 92.24 P
ATOM 26 OP1 A A 281 48.489 128.037 3.444 1.00 91.31 O
ATOM 27 OP2 A A 281 51.046 128.169 3.724 1.00 90.89 O
ATOM 28 O5' A A 281 49.755 126.244 4.663 1.00 91.25 O
TER
ATOM 1 O3' G B 346 58.080 122.278 8.137 1.00100.13 O
ATOM 2 P U B 347 59.033 121.133 7.521 1.00 99.88 P
ATOM 3 OP1 U B 347 60.309 121.072 8.287 1.00 99.01 O
ATOM 4 OP2 U B 347 59.070 121.319 6.045 1.00 99.53 O
ATOM 5 O5' U B 347 58.212 119.791 7.777 1.00 99.69 O
ATOM 6 C5' U B 347 58.292 119.089 9.035 1.00 99.57 C
ATOM 7 C4' U B 347 56.957 118.465 9.368 1.00 99.25 C
ATOM 8 O4' U B 347 56.001 119.510 9.676 1.00 98.53 O
ATOM 9 C3' U B 347 56.303 117.676 8.245 1.00 99.85 C
ATOM 10 O3' U B 347 56.820 116.349 8.183 1.00102.51 O
ATOM 11 C2' U B 347 54.827 117.710 8.629 1.00 98.72 C
ATOM 12 O2' U B 347 54.478 116.744 9.599 1.00 98.37 O
ATOM 13 C1' U B 347 54.707 119.104 9.257 1.00 98.09 C
ATOM 14 N1 U B 347 54.117 120.158 8.409 1.00 96.41 N
ATOM 15 C2 U B 347 52.816 119.972 7.961 1.00 95.69 C
ATOM 16 O2 U B 347 52.167 118.963 8.201 1.00 95.42 O
ATOM 17 N3 U B 347 52.303 121.010 7.221 1.00 95.37 N
ATOM 18 C4 U B 347 52.936 122.190 6.885 1.00 94.84 C
ATOM 19 O4 U B 347 52.327 123.038 6.226 1.00 92.86 O
ATOM 20 C5 U B 347 54.284 122.301 7.361 1.00 94.98 C
ATOM 21 C6 U B 347 54.817 121.308 8.084 1.00 95.37 C
ATOM 22 P A B 348 56.901 115.581 6.769 1.00104.49 P
ATOM 23 OP1 A B 348 57.511 114.251 7.060 1.00104.00 O
ATOM 24 OP2 A B 348 57.541 116.476 5.765 1.00103.55 O
ATOM 25 O5' A B 348 55.374 115.375 6.352 1.00102.63 O
TER
Atoms:
OP1: (52.975,129.768,-1.176)
OP2: (55.032,129.112,0.218)
C3': (51.257,125.979,1.812)
C1': (52.672,124.150,1.390)
C5': (51.806,127.082,-0.435)
O6: (57.992,124.592,4.139)
O4': (52.479,124.837,0.163)
C8: (54.647,125.720,1.705)
C2: (55.478,122.077,3.972)
C6: (56.928,124.053,3.812)
C5: (55.897,124.564,2.979)
C4: (54.784,123.780,2.738)
P: (53.882,128.720,-0.638)
C4': (51.418,125.822,0.308)
C2': (51.529,124.567,2.315)
O2': (50.441,123.684,2.128)
N1: (56.623,122.775,4.275)
N2: (55.368,120.860,4.511)
N3: (54.512,122.540,3.197)
N7: (55.796,125.782,2.320)
N9: (53.980,124.534,1.918)
O5': (52.990,127.666,0.159)
O3': (49.975,126.491,2.172)
OP2: (55.032,129.112,0.218)
C3': (51.257,125.979,1.812)
C1': (52.672,124.150,1.390)
C5': (51.806,127.082,-0.435)
O6: (57.992,124.592,4.139)
O4': (52.479,124.837,0.163)
C8: (54.647,125.720,1.705)
C2: (55.478,122.077,3.972)
C6: (56.928,124.053,3.812)
C5: (55.897,124.564,2.979)
C4: (54.784,123.780,2.738)
P: (53.882,128.720,-0.638)
C4': (51.418,125.822,0.308)
C2': (51.529,124.567,2.315)
O2': (50.441,123.684,2.128)
N1: (56.623,122.775,4.275)
N2: (55.368,120.860,4.511)
N3: (54.512,122.540,3.197)
N7: (55.796,125.782,2.320)
N9: (53.980,124.534,1.918)
O5': (52.990,127.666,0.159)
O3': (49.975,126.491,2.172)
C4: (52.936,122.190,6.885)
N3: (52.303,121.010,7.221)
OP1: (60.309,121.072,8.287)
OP2: (59.070,121.319,6.045)
C2: (52.816,119.972,7.961)
C1': (54.707,119.104,9.257)
C3': (56.303,117.676,8.245)
O5': (58.212,119.791,7.777)
O4': (56.001,119.510,9.676)
C5': (58.292,119.089,9.035)
P: (59.033,121.133,7.521)
C4': (56.957,118.465,9.368)
C2': (54.827,117.710,8.629)
O2': (54.478,116.744,9.599)
N1: (54.117,120.158,8.409)
O4: (52.327,123.038,6.226)
O2: (52.167,118.963,8.201)
C6: (54.817,121.308,8.084)
C5: (54.284,122.301,7.361)
O3': (56.820,116.349,8.183)
N3: (52.303,121.010,7.221)
OP1: (60.309,121.072,8.287)
OP2: (59.070,121.319,6.045)
C2: (52.816,119.972,7.961)
C1': (54.707,119.104,9.257)
C3': (56.303,117.676,8.245)
O5': (58.212,119.791,7.777)
O4': (56.001,119.510,9.676)
C5': (58.292,119.089,9.035)
P: (59.033,121.133,7.521)
C4': (56.957,118.465,9.368)
C2': (54.827,117.710,8.629)
O2': (54.478,116.744,9.599)
N1: (54.117,120.158,8.409)
O4: (52.327,123.038,6.226)
O2: (52.167,118.963,8.201)
C6: (54.817,121.308,8.084)
C5: (54.284,122.301,7.361)
O3': (56.820,116.349,8.183)
Image (generated by PyMOL):