ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A1307:A1321

Extra

PDB:
ATOM 1 O3' U A1306 40.936 -36.479 -49.776 1.00 56.14 O
ATOM 2 P G A1307 41.742 -35.947 -51.059 1.00 53.30 P
ATOM 3 OP1 G A1307 41.644 -37.003 -52.098 1.00 56.55 O
ATOM 4 OP2 G A1307 43.093 -35.518 -50.596 1.00 69.00 O
ATOM 5 O5' G A1307 40.897 -34.669 -51.489 1.00 59.48 O
ATOM 6 C5' G A1307 39.754 -34.795 -52.307 1.00 47.71 C
ATOM 7 C4' G A1307 39.028 -33.484 -52.447 1.00 48.64 C
ATOM 8 O4' G A1307 38.858 -32.876 -51.153 1.00 60.31 O
ATOM 9 C3' G A1307 39.715 -32.420 -53.272 1.00 49.96 C
ATOM 10 O3' G A1307 39.488 -32.592 -54.651 1.00 63.07 O
ATOM 11 C2' G A1307 39.110 -31.136 -52.735 1.00 53.90 C
ATOM 12 O2' G A1307 37.855 -30.901 -53.328 1.00 64.70 O
ATOM 13 C1' G A1307 38.889 -31.476 -51.268 1.00 53.24 C
ATOM 14 N9 G A1307 39.977 -30.988 -50.429 1.00 57.15 N
ATOM 15 C8 G A1307 41.050 -31.776 -50.087 1.00 65.62 C
ATOM 16 N7 G A1307 41.894 -31.149 -49.332 1.00 71.44 N
ATOM 17 C5 G A1307 41.329 -29.891 -49.172 1.00 58.05 C
ATOM 18 C6 G A1307 41.809 -28.787 -48.463 1.00 61.22 C
ATOM 19 O6 G A1307 42.826 -28.673 -47.813 1.00 75.77 O
ATOM 20 N1 G A1307 40.987 -27.710 -48.549 1.00 65.15 N
ATOM 21 C2 G A1307 39.828 -27.700 -49.234 1.00 64.00 C
ATOM 22 N2 G A1307 39.198 -26.527 -49.150 1.00 71.52 N
ATOM 23 N3 G A1307 39.347 -28.721 -49.920 1.00 61.11 N
ATOM 24 C4 G A1307 40.148 -29.774 -49.840 1.00 52.21 C
ATOM 25 P A A1308 40.587 -32.153 -55.710 1.00 60.95 P
ATOM 26 OP1 A A1308 41.108 -33.397 -56.326 1.00 78.62 O
ATOM 27 OP2 A A1308 41.527 -31.242 -55.018 1.00 75.79 O
ATOM 28 O5' A A1308 39.744 -31.342 -56.758 1.00 75.49 O
TER

ATOM 1 O3' G B1320 43.329 -23.838 -47.878 1.00 74.46 O
ATOM 2 P U B1321 41.811 -24.043 -47.407 1.00 82.28 P
ATOM 3 OP1 U B1321 41.679 -23.445 -46.052 1.00 71.37 O
ATOM 4 OP2 U B1321 41.501 -25.483 -47.580 1.00 74.30 O
ATOM 5 O5' U B1321 40.996 -23.178 -48.469 1.00106.00 O
ATOM 6 C5' U B1321 40.949 -21.757 -48.381 1.00114.53 C
ATOM 7 C4' U B1321 39.888 -21.171 -49.291 1.00125.69 C
ATOM 8 O4' U B1321 40.189 -21.490 -50.682 1.00124.46 O
ATOM 9 C3' U B1321 38.467 -21.694 -49.100 1.00127.19 C
ATOM 10 O3' U B1321 37.793 -21.121 -47.973 1.00125.86 O
ATOM 11 C2' U B1321 37.818 -21.383 -50.452 1.00114.31 C
ATOM 12 O2' U B1321 37.463 -20.013 -50.534 1.00115.18 O
ATOM 13 C1' U B1321 38.985 -21.629 -51.418 1.00112.90 C
ATOM 14 N1 U B1321 38.941 -22.990 -52.046 1.00100.28 N
ATOM 15 C2 U B1321 38.015 -23.211 -53.055 1.00102.07 C
ATOM 16 O2 U B1321 37.245 -22.346 -53.420 1.00108.85 O
ATOM 17 N3 U B1321 38.004 -24.472 -53.618 1.00 91.28 N
ATOM 18 C4 U B1321 38.822 -25.538 -53.293 1.00 89.76 C
ATOM 19 O4 U B1321 38.704 -26.618 -53.877 1.00 81.66 O
ATOM 20 C5 U B1321 39.758 -25.239 -52.251 1.00 88.30 C
ATOM 21 C6 U B1321 39.788 -24.018 -51.686 1.00 93.87 C
ATOM 22 P A B1322 36.838 -22.039 -47.040 1.00 98.30 P
ATOM 23 OP1 A B1322 36.411 -21.210 -45.895 1.00 97.77 O
ATOM 24 OP2 A B1322 37.565 -23.291 -46.764 1.00104.07 O
ATOM 25 O5' A B1322 35.601 -22.335 -48.002 1.00 83.02 O
TER

Atoms:
OP1: (41.644,-37.003,-52.098)
OP2: (43.093,-35.518,-50.596)
C3': (39.715,-32.420,-53.272)
C1': (38.889,-31.476,-51.268)
C5': (39.754,-34.795,-52.307)
O6: (42.826,-28.673,-47.813)
O4': (38.858,-32.876,-51.153)
C8: (41.050,-31.776,-50.087)
C2: (39.828,-27.700,-49.234)
C6: (41.809,-28.787,-48.463)
C5: (41.329,-29.891,-49.172)
C4: (40.148,-29.774,-49.840)
P: (41.742,-35.947,-51.059)
C4': (39.028,-33.484,-52.447)
C2': (39.110,-31.136,-52.735)
O2': (37.855,-30.901,-53.328)
N1: (40.987,-27.710,-48.549)
N2: (39.198,-26.527,-49.150)
N3: (39.347,-28.721,-49.920)
N7: (41.894,-31.149,-49.332)
N9: (39.977,-30.988,-50.429)
O5': (40.897,-34.669,-51.489)
O3': (39.488,-32.592,-54.651)
C4: (38.822,-25.538,-53.293)
N3: (38.004,-24.472,-53.618)
OP1: (41.679,-23.445,-46.052)
OP2: (41.501,-25.483,-47.580)
C2: (38.015,-23.211,-53.055)
C1': (38.985,-21.629,-51.418)
C3': (38.467,-21.694,-49.100)
O5': (40.996,-23.178,-48.469)
O4': (40.189,-21.490,-50.682)
C5': (40.949,-21.757,-48.381)
P: (41.811,-24.043,-47.407)
C4': (39.888,-21.171,-49.291)
C2': (37.818,-21.383,-50.452)
O2': (37.463,-20.013,-50.534)
N1: (38.941,-22.990,-52.046)
O4: (38.704,-26.618,-53.877)
O2: (37.245,-22.346,-53.420)
C6: (39.788,-24.018,-51.686)
C5: (39.758,-25.239,-52.251)
O3': (37.793,-21.121,-47.973)
Image (generated by PyMOL):
PyMOL image
show in jmol