Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:0556:0577
Extra
PDB:
ATOM 1 O3' U A 555 4.355 93.552 108.027 1.00 46.95 O
ATOM 2 P G A 556 3.801 92.931 109.400 1.00 47.43 P
ATOM 3 OP1 G A 556 4.775 93.287 110.462 1.00 48.34 O
ATOM 4 OP2 G A 556 3.457 91.502 109.158 1.00 44.44 O
ATOM 5 O5' G A 556 2.469 93.755 109.677 1.00 47.82 O
ATOM 6 C5' G A 556 2.527 95.104 110.163 1.00 49.50 C
ATOM 7 C4' G A 556 1.133 95.632 110.398 1.00 52.61 C
ATOM 8 O4' G A 556 0.450 95.783 109.127 1.00 52.92 O
ATOM 9 C3' G A 556 0.202 94.731 111.195 1.00 53.18 C
ATOM 10 O3' G A 556 0.426 94.801 112.596 1.00 54.29 O
ATOM 11 C2' G A 556 -1.161 95.262 110.786 1.00 53.34 C
ATOM 12 O2' G A 556 -1.492 96.492 111.404 1.00 53.12 O
ATOM 13 C1' G A 556 -0.930 95.509 109.298 1.00 52.40 C
ATOM 14 N9 G A 556 -1.266 94.327 108.514 1.00 52.21 N
ATOM 15 C8 G A 556 -0.435 93.295 108.146 1.00 52.04 C
ATOM 16 N7 G A 556 -1.039 92.379 107.436 1.00 52.54 N
ATOM 17 C5 G A 556 -2.347 92.835 107.331 1.00 53.58 C
ATOM 18 C6 G A 556 -3.470 92.272 106.672 1.00 52.98 C
ATOM 19 O6 G A 556 -3.537 91.224 106.024 1.00 54.67 O
ATOM 20 N1 G A 556 -4.601 93.065 106.825 1.00 52.01 N
ATOM 21 C2 G A 556 -4.651 94.245 107.527 1.00 52.60 C
ATOM 22 N2 G A 556 -5.839 94.862 107.572 1.00 53.64 N
ATOM 23 N3 G A 556 -3.615 94.781 108.141 1.00 52.45 N
ATOM 24 C4 G A 556 -2.502 94.032 108.000 1.00 53.32 C
ATOM 25 P A A 557 0.014 93.557 113.526 1.00 56.13 P
ATOM 26 OP1 A A 557 0.738 93.756 114.803 1.00 56.19 O
ATOM 27 OP2 A A 557 0.156 92.270 112.793 1.00 53.65 O
ATOM 28 O5' A A 557 -1.541 93.786 113.773 1.00 58.66 O
TER
ATOM 1 O3' G B 576 -7.813 90.291 106.952 1.00 65.56 O
ATOM 2 P U B 577 -8.172 91.317 105.760 1.00 68.00 P
ATOM 3 OP1 U B 577 -8.734 90.553 104.611 1.00 65.85 O
ATOM 4 OP2 U B 577 -7.006 92.215 105.542 1.00 67.10 O
ATOM 5 O5' U B 577 -9.306 92.240 106.398 1.00 67.73 O
ATOM 6 C5' U B 577 -10.580 91.694 106.823 1.00 67.74 C
ATOM 7 C4' U B 577 -11.074 92.423 108.052 1.00 67.58 C
ATOM 8 O4' U B 577 -10.382 91.937 109.228 1.00 67.72 O
ATOM 9 C3' U B 577 -10.818 93.922 108.049 1.00 68.68 C
ATOM 10 O3' U B 577 -11.813 94.632 107.317 1.00 69.63 O
ATOM 11 C2' U B 577 -10.807 94.268 109.534 1.00 69.09 C
ATOM 12 O2' U B 577 -12.092 94.481 110.084 1.00 69.85 O
ATOM 13 C1' U B 577 -10.174 93.008 110.140 1.00 68.63 C
ATOM 14 N1 U B 577 -8.731 93.121 110.417 1.00 69.12 N
ATOM 15 C2 U B 577 -8.316 94.049 111.371 1.00 70.25 C
ATOM 16 O2 U B 577 -9.089 94.765 111.993 1.00 68.88 O
ATOM 17 N3 U B 577 -6.960 94.105 111.569 1.00 70.19 N
ATOM 18 C4 U B 577 -5.996 93.355 110.935 1.00 70.29 C
ATOM 19 O4 U B 577 -4.813 93.535 111.220 1.00 72.53 O
ATOM 20 C5 U B 577 -6.496 92.415 109.979 1.00 69.81 C
ATOM 21 C6 U B 577 -7.811 92.334 109.755 1.00 69.64 C
ATOM 22 P A B 578 -11.400 95.927 106.461 1.00 70.09 P
ATOM 23 OP1 A B 578 -12.596 96.399 105.727 1.00 71.99 O
ATOM 24 OP2 A B 578 -10.168 95.605 105.705 1.00 72.47 O
ATOM 25 O5' A B 578 -11.049 97.013 107.567 1.00 69.18 O
TER
ATOM 2 P G A 556 3.801 92.931 109.400 1.00 47.43 P
ATOM 3 OP1 G A 556 4.775 93.287 110.462 1.00 48.34 O
ATOM 4 OP2 G A 556 3.457 91.502 109.158 1.00 44.44 O
ATOM 5 O5' G A 556 2.469 93.755 109.677 1.00 47.82 O
ATOM 6 C5' G A 556 2.527 95.104 110.163 1.00 49.50 C
ATOM 7 C4' G A 556 1.133 95.632 110.398 1.00 52.61 C
ATOM 8 O4' G A 556 0.450 95.783 109.127 1.00 52.92 O
ATOM 9 C3' G A 556 0.202 94.731 111.195 1.00 53.18 C
ATOM 10 O3' G A 556 0.426 94.801 112.596 1.00 54.29 O
ATOM 11 C2' G A 556 -1.161 95.262 110.786 1.00 53.34 C
ATOM 12 O2' G A 556 -1.492 96.492 111.404 1.00 53.12 O
ATOM 13 C1' G A 556 -0.930 95.509 109.298 1.00 52.40 C
ATOM 14 N9 G A 556 -1.266 94.327 108.514 1.00 52.21 N
ATOM 15 C8 G A 556 -0.435 93.295 108.146 1.00 52.04 C
ATOM 16 N7 G A 556 -1.039 92.379 107.436 1.00 52.54 N
ATOM 17 C5 G A 556 -2.347 92.835 107.331 1.00 53.58 C
ATOM 18 C6 G A 556 -3.470 92.272 106.672 1.00 52.98 C
ATOM 19 O6 G A 556 -3.537 91.224 106.024 1.00 54.67 O
ATOM 20 N1 G A 556 -4.601 93.065 106.825 1.00 52.01 N
ATOM 21 C2 G A 556 -4.651 94.245 107.527 1.00 52.60 C
ATOM 22 N2 G A 556 -5.839 94.862 107.572 1.00 53.64 N
ATOM 23 N3 G A 556 -3.615 94.781 108.141 1.00 52.45 N
ATOM 24 C4 G A 556 -2.502 94.032 108.000 1.00 53.32 C
ATOM 25 P A A 557 0.014 93.557 113.526 1.00 56.13 P
ATOM 26 OP1 A A 557 0.738 93.756 114.803 1.00 56.19 O
ATOM 27 OP2 A A 557 0.156 92.270 112.793 1.00 53.65 O
ATOM 28 O5' A A 557 -1.541 93.786 113.773 1.00 58.66 O
TER
ATOM 1 O3' G B 576 -7.813 90.291 106.952 1.00 65.56 O
ATOM 2 P U B 577 -8.172 91.317 105.760 1.00 68.00 P
ATOM 3 OP1 U B 577 -8.734 90.553 104.611 1.00 65.85 O
ATOM 4 OP2 U B 577 -7.006 92.215 105.542 1.00 67.10 O
ATOM 5 O5' U B 577 -9.306 92.240 106.398 1.00 67.73 O
ATOM 6 C5' U B 577 -10.580 91.694 106.823 1.00 67.74 C
ATOM 7 C4' U B 577 -11.074 92.423 108.052 1.00 67.58 C
ATOM 8 O4' U B 577 -10.382 91.937 109.228 1.00 67.72 O
ATOM 9 C3' U B 577 -10.818 93.922 108.049 1.00 68.68 C
ATOM 10 O3' U B 577 -11.813 94.632 107.317 1.00 69.63 O
ATOM 11 C2' U B 577 -10.807 94.268 109.534 1.00 69.09 C
ATOM 12 O2' U B 577 -12.092 94.481 110.084 1.00 69.85 O
ATOM 13 C1' U B 577 -10.174 93.008 110.140 1.00 68.63 C
ATOM 14 N1 U B 577 -8.731 93.121 110.417 1.00 69.12 N
ATOM 15 C2 U B 577 -8.316 94.049 111.371 1.00 70.25 C
ATOM 16 O2 U B 577 -9.089 94.765 111.993 1.00 68.88 O
ATOM 17 N3 U B 577 -6.960 94.105 111.569 1.00 70.19 N
ATOM 18 C4 U B 577 -5.996 93.355 110.935 1.00 70.29 C
ATOM 19 O4 U B 577 -4.813 93.535 111.220 1.00 72.53 O
ATOM 20 C5 U B 577 -6.496 92.415 109.979 1.00 69.81 C
ATOM 21 C6 U B 577 -7.811 92.334 109.755 1.00 69.64 C
ATOM 22 P A B 578 -11.400 95.927 106.461 1.00 70.09 P
ATOM 23 OP1 A B 578 -12.596 96.399 105.727 1.00 71.99 O
ATOM 24 OP2 A B 578 -10.168 95.605 105.705 1.00 72.47 O
ATOM 25 O5' A B 578 -11.049 97.013 107.567 1.00 69.18 O
TER
Atoms:
OP1: (4.775,93.287,110.462)
OP2: (3.457,91.502,109.158)
C3': (0.202,94.731,111.195)
C1': (-0.930,95.509,109.298)
C5': (2.527,95.104,110.163)
O6: (-3.537,91.224,106.024)
O4': (0.450,95.783,109.127)
C8: (-0.435,93.295,108.146)
C2: (-4.651,94.245,107.527)
C6: (-3.470,92.272,106.672)
C5: (-2.347,92.835,107.331)
C4: (-2.502,94.032,108.000)
P: (3.801,92.931,109.400)
C4': (1.133,95.632,110.398)
C2': (-1.161,95.262,110.786)
O2': (-1.492,96.492,111.404)
N1: (-4.601,93.065,106.825)
N2: (-5.839,94.862,107.572)
N3: (-3.615,94.781,108.141)
N7: (-1.039,92.379,107.436)
N9: (-1.266,94.327,108.514)
O5': (2.469,93.755,109.677)
O3': (0.426,94.801,112.596)
OP2: (3.457,91.502,109.158)
C3': (0.202,94.731,111.195)
C1': (-0.930,95.509,109.298)
C5': (2.527,95.104,110.163)
O6: (-3.537,91.224,106.024)
O4': (0.450,95.783,109.127)
C8: (-0.435,93.295,108.146)
C2: (-4.651,94.245,107.527)
C6: (-3.470,92.272,106.672)
C5: (-2.347,92.835,107.331)
C4: (-2.502,94.032,108.000)
P: (3.801,92.931,109.400)
C4': (1.133,95.632,110.398)
C2': (-1.161,95.262,110.786)
O2': (-1.492,96.492,111.404)
N1: (-4.601,93.065,106.825)
N2: (-5.839,94.862,107.572)
N3: (-3.615,94.781,108.141)
N7: (-1.039,92.379,107.436)
N9: (-1.266,94.327,108.514)
O5': (2.469,93.755,109.677)
O3': (0.426,94.801,112.596)
C4: (-5.996,93.355,110.935)
N3: (-6.960,94.105,111.569)
OP1: (-8.734,90.553,104.611)
OP2: (-7.006,92.215,105.542)
C2: (-8.316,94.049,111.371)
C1': (-10.174,93.008,110.140)
C3': (-10.818,93.922,108.049)
O5': (-9.306,92.240,106.398)
O4': (-10.382,91.937,109.228)
C5': (-10.580,91.694,106.823)
P: (-8.172,91.317,105.760)
C4': (-11.074,92.423,108.052)
C2': (-10.807,94.268,109.534)
O2': (-12.092,94.481,110.084)
N1: (-8.731,93.121,110.417)
O4: (-4.813,93.535,111.220)
O2: (-9.089,94.765,111.993)
C6: (-7.811,92.334,109.755)
C5: (-6.496,92.415,109.979)
O3': (-11.813,94.632,107.317)
N3: (-6.960,94.105,111.569)
OP1: (-8.734,90.553,104.611)
OP2: (-7.006,92.215,105.542)
C2: (-8.316,94.049,111.371)
C1': (-10.174,93.008,110.140)
C3': (-10.818,93.922,108.049)
O5': (-9.306,92.240,106.398)
O4': (-10.382,91.937,109.228)
C5': (-10.580,91.694,106.823)
P: (-8.172,91.317,105.760)
C4': (-11.074,92.423,108.052)
C2': (-10.807,94.268,109.534)
O2': (-12.092,94.481,110.084)
N1: (-8.731,93.121,110.417)
O4: (-4.813,93.535,111.220)
O2: (-9.089,94.765,111.993)
C6: (-7.811,92.334,109.755)
C5: (-6.496,92.415,109.979)
O3': (-11.813,94.632,107.317)
Image (generated by PyMOL):