Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DIZ:A124:A127
Extra
PDB:
ATOM 1 O3' G A 123 13.708 39.341 14.042 1.00 43.86 O
ATOM 2 P G A 124 13.071 40.804 14.249 1.00 43.81 P
ATOM 3 OP1 G A 124 11.617 40.660 14.510 1.00 43.33 O
ATOM 4 OP2 G A 124 13.518 41.650 13.110 1.00 43.01 O
ATOM 5 O5' G A 124 13.761 41.316 15.607 1.00 42.79 O
ATOM 6 C5' G A 124 13.409 40.748 16.859 1.00 40.64 C
ATOM 7 C4' G A 124 14.455 41.038 17.924 1.00 40.16 C
ATOM 8 O4' G A 124 15.749 40.492 17.566 1.00 39.98 O
ATOM 9 C3' G A 124 14.762 42.498 18.215 1.00 39.53 C
ATOM 10 O3' G A 124 13.730 43.053 19.000 1.00 39.26 O
ATOM 11 C2' G A 124 16.076 42.345 18.982 1.00 39.78 C
ATOM 12 O2' G A 124 15.958 41.818 20.296 1.00 40.36 O
ATOM 13 C1' G A 124 16.772 41.309 18.112 1.00 39.48 C
ATOM 14 N9 G A 124 17.544 41.923 17.040 1.00 39.34 N
ATOM 15 C8 G A 124 17.147 42.116 15.736 1.00 39.17 C
ATOM 16 N7 G A 124 18.046 42.695 14.994 1.00 39.28 N
ATOM 17 C5 G A 124 19.110 42.902 15.858 1.00 39.44 C
ATOM 18 C6 G A 124 20.373 43.496 15.613 1.00 39.30 C
ATOM 19 O6 G A 124 20.809 43.971 14.554 1.00 39.42 O
ATOM 20 N1 G A 124 21.160 43.519 16.766 1.00 39.43 N
ATOM 21 C2 G A 124 20.782 43.023 17.998 1.00 39.10 C
ATOM 22 N2 G A 124 21.690 43.127 18.983 1.00 38.77 N
ATOM 23 N3 G A 124 19.601 42.457 18.236 1.00 39.07 N
ATOM 24 C4 G A 124 18.817 42.434 17.126 1.00 39.33 C
ATOM 25 P A A 125 12.713 44.136 18.406 1.00 40.21 P
ATOM 26 OP1 A A 125 11.459 44.038 19.182 1.00 39.58 O
ATOM 27 OP2 A A 125 12.682 44.046 16.918 1.00 40.05 O
ATOM 28 O5' A A 125 13.402 45.506 18.847 1.00 40.03 O
TER
ATOM 1 O3' A B 126 22.355 47.355 18.071 1.00 41.95 O
ATOM 2 P U B 127 23.639 46.556 17.569 1.00 42.42 P
ATOM 3 OP1 U B 127 24.269 47.378 16.510 1.00 42.09 O
ATOM 4 OP2 U B 127 23.297 45.138 17.321 1.00 41.78 O
ATOM 5 O5' U B 127 24.536 46.611 18.890 1.00 43.86 O
ATOM 6 C5' U B 127 25.951 46.720 18.854 1.00 45.67 C
ATOM 7 C4' U B 127 26.487 46.583 20.265 1.00 46.93 C
ATOM 8 O4' U B 127 25.820 47.533 21.129 1.00 47.66 O
ATOM 9 C3' U B 127 26.192 45.253 20.941 1.00 47.17 C
ATOM 10 O3' U B 127 27.120 44.262 20.511 1.00 45.94 O
ATOM 11 C2' U B 127 26.347 45.613 22.420 1.00 48.10 C
ATOM 12 O2' U B 127 27.679 45.476 22.870 1.00 49.24 O
ATOM 13 C1' U B 127 25.954 47.090 22.470 1.00 48.84 C
ATOM 14 N1 U B 127 24.695 47.462 23.229 1.00 49.84 N
ATOM 15 C2 U B 127 23.583 46.635 23.304 1.00 50.27 C
ATOM 16 O2 U B 127 23.502 45.538 22.786 1.00 50.59 O
ATOM 17 N3 U B 127 22.523 47.150 24.019 1.00 50.43 N
ATOM 18 C4 U B 127 22.455 48.371 24.668 1.00 49.92 C
ATOM 19 O4 U B 127 21.435 48.687 25.278 1.00 49.64 O
ATOM 20 C5 U B 127 23.644 49.174 24.547 1.00 49.75 C
ATOM 21 C6 U B 127 24.686 48.701 23.851 1.00 50.07 C
ATOM 22 P A B 128 26.697 42.724 20.367 1.00 45.35 P
ATOM 23 OP1 A B 128 27.929 41.954 20.098 1.00 45.32 O
ATOM 24 OP2 A B 128 25.555 42.634 19.432 1.00 45.54 O
ATOM 25 O5' A B 128 26.180 42.340 21.821 1.00 45.51 O
TER
ATOM 2 P G A 124 13.071 40.804 14.249 1.00 43.81 P
ATOM 3 OP1 G A 124 11.617 40.660 14.510 1.00 43.33 O
ATOM 4 OP2 G A 124 13.518 41.650 13.110 1.00 43.01 O
ATOM 5 O5' G A 124 13.761 41.316 15.607 1.00 42.79 O
ATOM 6 C5' G A 124 13.409 40.748 16.859 1.00 40.64 C
ATOM 7 C4' G A 124 14.455 41.038 17.924 1.00 40.16 C
ATOM 8 O4' G A 124 15.749 40.492 17.566 1.00 39.98 O
ATOM 9 C3' G A 124 14.762 42.498 18.215 1.00 39.53 C
ATOM 10 O3' G A 124 13.730 43.053 19.000 1.00 39.26 O
ATOM 11 C2' G A 124 16.076 42.345 18.982 1.00 39.78 C
ATOM 12 O2' G A 124 15.958 41.818 20.296 1.00 40.36 O
ATOM 13 C1' G A 124 16.772 41.309 18.112 1.00 39.48 C
ATOM 14 N9 G A 124 17.544 41.923 17.040 1.00 39.34 N
ATOM 15 C8 G A 124 17.147 42.116 15.736 1.00 39.17 C
ATOM 16 N7 G A 124 18.046 42.695 14.994 1.00 39.28 N
ATOM 17 C5 G A 124 19.110 42.902 15.858 1.00 39.44 C
ATOM 18 C6 G A 124 20.373 43.496 15.613 1.00 39.30 C
ATOM 19 O6 G A 124 20.809 43.971 14.554 1.00 39.42 O
ATOM 20 N1 G A 124 21.160 43.519 16.766 1.00 39.43 N
ATOM 21 C2 G A 124 20.782 43.023 17.998 1.00 39.10 C
ATOM 22 N2 G A 124 21.690 43.127 18.983 1.00 38.77 N
ATOM 23 N3 G A 124 19.601 42.457 18.236 1.00 39.07 N
ATOM 24 C4 G A 124 18.817 42.434 17.126 1.00 39.33 C
ATOM 25 P A A 125 12.713 44.136 18.406 1.00 40.21 P
ATOM 26 OP1 A A 125 11.459 44.038 19.182 1.00 39.58 O
ATOM 27 OP2 A A 125 12.682 44.046 16.918 1.00 40.05 O
ATOM 28 O5' A A 125 13.402 45.506 18.847 1.00 40.03 O
TER
ATOM 1 O3' A B 126 22.355 47.355 18.071 1.00 41.95 O
ATOM 2 P U B 127 23.639 46.556 17.569 1.00 42.42 P
ATOM 3 OP1 U B 127 24.269 47.378 16.510 1.00 42.09 O
ATOM 4 OP2 U B 127 23.297 45.138 17.321 1.00 41.78 O
ATOM 5 O5' U B 127 24.536 46.611 18.890 1.00 43.86 O
ATOM 6 C5' U B 127 25.951 46.720 18.854 1.00 45.67 C
ATOM 7 C4' U B 127 26.487 46.583 20.265 1.00 46.93 C
ATOM 8 O4' U B 127 25.820 47.533 21.129 1.00 47.66 O
ATOM 9 C3' U B 127 26.192 45.253 20.941 1.00 47.17 C
ATOM 10 O3' U B 127 27.120 44.262 20.511 1.00 45.94 O
ATOM 11 C2' U B 127 26.347 45.613 22.420 1.00 48.10 C
ATOM 12 O2' U B 127 27.679 45.476 22.870 1.00 49.24 O
ATOM 13 C1' U B 127 25.954 47.090 22.470 1.00 48.84 C
ATOM 14 N1 U B 127 24.695 47.462 23.229 1.00 49.84 N
ATOM 15 C2 U B 127 23.583 46.635 23.304 1.00 50.27 C
ATOM 16 O2 U B 127 23.502 45.538 22.786 1.00 50.59 O
ATOM 17 N3 U B 127 22.523 47.150 24.019 1.00 50.43 N
ATOM 18 C4 U B 127 22.455 48.371 24.668 1.00 49.92 C
ATOM 19 O4 U B 127 21.435 48.687 25.278 1.00 49.64 O
ATOM 20 C5 U B 127 23.644 49.174 24.547 1.00 49.75 C
ATOM 21 C6 U B 127 24.686 48.701 23.851 1.00 50.07 C
ATOM 22 P A B 128 26.697 42.724 20.367 1.00 45.35 P
ATOM 23 OP1 A B 128 27.929 41.954 20.098 1.00 45.32 O
ATOM 24 OP2 A B 128 25.555 42.634 19.432 1.00 45.54 O
ATOM 25 O5' A B 128 26.180 42.340 21.821 1.00 45.51 O
TER
Atoms:
OP1: (11.617,40.660,14.510)
OP2: (13.518,41.650,13.110)
C3': (14.762,42.498,18.215)
C1': (16.772,41.309,18.112)
C5': (13.409,40.748,16.859)
O6: (20.809,43.971,14.554)
O4': (15.749,40.492,17.566)
C8: (17.147,42.116,15.736)
C2: (20.782,43.023,17.998)
C6: (20.373,43.496,15.613)
C5: (19.110,42.902,15.858)
C4: (18.817,42.434,17.126)
P: (13.071,40.804,14.249)
C4': (14.455,41.038,17.924)
C2': (16.076,42.345,18.982)
O2': (15.958,41.818,20.296)
N1: (21.160,43.519,16.766)
N2: (21.690,43.127,18.983)
N3: (19.601,42.457,18.236)
N7: (18.046,42.695,14.994)
N9: (17.544,41.923,17.040)
O5': (13.761,41.316,15.607)
O3': (13.730,43.053,19.000)
OP2: (13.518,41.650,13.110)
C3': (14.762,42.498,18.215)
C1': (16.772,41.309,18.112)
C5': (13.409,40.748,16.859)
O6: (20.809,43.971,14.554)
O4': (15.749,40.492,17.566)
C8: (17.147,42.116,15.736)
C2: (20.782,43.023,17.998)
C6: (20.373,43.496,15.613)
C5: (19.110,42.902,15.858)
C4: (18.817,42.434,17.126)
P: (13.071,40.804,14.249)
C4': (14.455,41.038,17.924)
C2': (16.076,42.345,18.982)
O2': (15.958,41.818,20.296)
N1: (21.160,43.519,16.766)
N2: (21.690,43.127,18.983)
N3: (19.601,42.457,18.236)
N7: (18.046,42.695,14.994)
N9: (17.544,41.923,17.040)
O5': (13.761,41.316,15.607)
O3': (13.730,43.053,19.000)
C4: (22.455,48.371,24.668)
N3: (22.523,47.150,24.019)
OP1: (24.269,47.378,16.510)
OP2: (23.297,45.138,17.321)
C2: (23.583,46.635,23.304)
C1': (25.954,47.090,22.470)
C3': (26.192,45.253,20.941)
O5': (24.536,46.611,18.890)
O4': (25.820,47.533,21.129)
C5': (25.951,46.720,18.854)
P: (23.639,46.556,17.569)
C4': (26.487,46.583,20.265)
C2': (26.347,45.613,22.420)
O2': (27.679,45.476,22.870)
N1: (24.695,47.462,23.229)
O4: (21.435,48.687,25.278)
O2: (23.502,45.538,22.786)
C6: (24.686,48.701,23.851)
C5: (23.644,49.174,24.547)
O3': (27.120,44.262,20.511)
N3: (22.523,47.150,24.019)
OP1: (24.269,47.378,16.510)
OP2: (23.297,45.138,17.321)
C2: (23.583,46.635,23.304)
C1': (25.954,47.090,22.470)
C3': (26.192,45.253,20.941)
O5': (24.536,46.611,18.890)
O4': (25.820,47.533,21.129)
C5': (25.951,46.720,18.854)
P: (23.639,46.556,17.569)
C4': (26.487,46.583,20.265)
C2': (26.347,45.613,22.420)
O2': (27.679,45.476,22.870)
N1: (24.695,47.462,23.229)
O4: (21.435,48.687,25.278)
O2: (23.502,45.538,22.786)
C6: (24.686,48.701,23.851)
C5: (23.644,49.174,24.547)
O3': (27.120,44.262,20.511)
Image (generated by PyMOL):