Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MHK:S6:L6
Extra
PDB:
ATOM 1 O3' C A 5 -3.411 -3.341 12.323 1.00 45.67 O
ATOM 2 P G A 6 -3.539 -3.389 13.928 1.00 48.42 P
ATOM 3 OP1 G A 6 -4.786 -4.149 14.204 1.00 47.81 O
ATOM 4 OP2 G A 6 -3.390 -2.011 14.472 1.00 47.13 O
ATOM 5 O5' G A 6 -2.276 -4.254 14.388 1.00 48.74 O
ATOM 6 C5' G A 6 -2.015 -5.544 13.835 1.00 49.04 C
ATOM 7 C4' G A 6 -0.598 -5.972 14.149 1.00 52.39 C
ATOM 8 O4' G A 6 0.348 -5.177 13.377 1.00 51.91 O
ATOM 9 C3' G A 6 -0.159 -5.789 15.598 1.00 54.30 C
ATOM 10 O3' G A 6 -0.558 -6.889 16.408 1.00 57.99 O
ATOM 11 C2' G A 6 1.357 -5.716 15.463 1.00 53.01 C
ATOM 12 O2' G A 6 1.951 -6.988 15.320 1.00 52.38 O
ATOM 13 C1' G A 6 1.507 -4.918 14.163 1.00 51.91 C
ATOM 14 N9 G A 6 1.573 -3.484 14.423 1.00 49.61 N
ATOM 15 C8 G A 6 0.511 -2.612 14.477 1.00 49.83 C
ATOM 16 N7 G A 6 0.864 -1.390 14.769 1.00 48.88 N
ATOM 17 C5 G A 6 2.243 -1.455 14.911 1.00 48.44 C
ATOM 18 C6 G A 6 3.175 -0.444 15.247 1.00 47.98 C
ATOM 19 O6 G A 6 2.958 0.739 15.509 1.00 50.07 O
ATOM 20 N1 G A 6 4.474 -0.933 15.277 1.00 46.99 N
ATOM 21 C2 G A 6 4.834 -2.232 15.031 1.00 47.38 C
ATOM 22 N2 G A 6 6.149 -2.499 15.100 1.00 45.85 N
ATOM 23 N3 G A 6 3.969 -3.197 14.735 1.00 47.44 N
ATOM 24 C4 G A 6 2.700 -2.738 14.689 1.00 48.18 C
ATOM 25 P A A 7 -0.817 -6.677 17.990 1.00 61.97 P
ATOM 26 OP1 A A 7 -2.239 -7.033 18.255 1.00 60.30 O
ATOM 27 OP2 A A 7 -0.303 -5.343 18.420 1.00 59.67 O
ATOM 28 O5' A A 7 0.090 -7.809 18.655 1.00 63.95 O
TER
ATOM 1 O3' C B 5 6.445 2.435 18.298 1.00 65.16 O
ATOM 2 P U B 6 7.288 1.605 17.210 1.00 65.76 P
ATOM 3 OP1 U B 6 8.426 2.460 16.792 1.00 65.79 O
ATOM 4 OP2 U B 6 6.355 1.071 16.184 1.00 65.93 O
ATOM 5 O5' U B 6 7.872 0.374 18.039 1.00 65.82 O
ATOM 6 C5' U B 6 8.864 0.571 19.048 1.00 63.00 C
ATOM 7 C4' U B 6 9.425 -0.760 19.495 1.00 61.73 C
ATOM 8 O4' U B 6 8.393 -1.526 20.172 1.00 60.79 O
ATOM 9 C3' U B 6 9.891 -1.674 18.374 1.00 61.49 C
ATOM 10 O3' U B 6 11.214 -1.344 17.962 1.00 61.86 O
ATOM 11 C2' U B 6 9.813 -3.049 19.024 1.00 59.73 C
ATOM 12 O2' U B 6 10.928 -3.303 19.847 1.00 58.45 O
ATOM 13 C1' U B 6 8.559 -2.907 19.892 1.00 59.18 C
ATOM 14 N1 U B 6 7.317 -3.402 19.276 1.00 58.82 N
ATOM 15 C2 U B 6 7.179 -4.775 19.093 1.00 59.35 C
ATOM 16 O2 U B 6 8.050 -5.578 19.403 1.00 60.15 O
ATOM 17 N3 U B 6 5.985 -5.170 18.527 1.00 57.80 N
ATOM 18 C4 U B 6 4.939 -4.351 18.131 1.00 57.82 C
ATOM 19 O4 U B 6 3.922 -4.856 17.647 1.00 56.93 O
ATOM 20 C5 U B 6 5.161 -2.948 18.347 1.00 57.79 C
ATOM 21 C6 U B 6 6.313 -2.532 18.896 1.00 58.45 C
ATOM 22 P A B 7 11.681 -1.676 16.466 1.00 62.59 P
ATOM 23 OP1 A B 7 13.108 -1.295 16.344 1.00 61.04 O
ATOM 24 OP2 A B 7 10.682 -1.101 15.521 1.00 62.60 O
ATOM 25 O5' A B 7 11.570 -3.263 16.402 1.00 62.89 O
TER
ATOM 2 P G A 6 -3.539 -3.389 13.928 1.00 48.42 P
ATOM 3 OP1 G A 6 -4.786 -4.149 14.204 1.00 47.81 O
ATOM 4 OP2 G A 6 -3.390 -2.011 14.472 1.00 47.13 O
ATOM 5 O5' G A 6 -2.276 -4.254 14.388 1.00 48.74 O
ATOM 6 C5' G A 6 -2.015 -5.544 13.835 1.00 49.04 C
ATOM 7 C4' G A 6 -0.598 -5.972 14.149 1.00 52.39 C
ATOM 8 O4' G A 6 0.348 -5.177 13.377 1.00 51.91 O
ATOM 9 C3' G A 6 -0.159 -5.789 15.598 1.00 54.30 C
ATOM 10 O3' G A 6 -0.558 -6.889 16.408 1.00 57.99 O
ATOM 11 C2' G A 6 1.357 -5.716 15.463 1.00 53.01 C
ATOM 12 O2' G A 6 1.951 -6.988 15.320 1.00 52.38 O
ATOM 13 C1' G A 6 1.507 -4.918 14.163 1.00 51.91 C
ATOM 14 N9 G A 6 1.573 -3.484 14.423 1.00 49.61 N
ATOM 15 C8 G A 6 0.511 -2.612 14.477 1.00 49.83 C
ATOM 16 N7 G A 6 0.864 -1.390 14.769 1.00 48.88 N
ATOM 17 C5 G A 6 2.243 -1.455 14.911 1.00 48.44 C
ATOM 18 C6 G A 6 3.175 -0.444 15.247 1.00 47.98 C
ATOM 19 O6 G A 6 2.958 0.739 15.509 1.00 50.07 O
ATOM 20 N1 G A 6 4.474 -0.933 15.277 1.00 46.99 N
ATOM 21 C2 G A 6 4.834 -2.232 15.031 1.00 47.38 C
ATOM 22 N2 G A 6 6.149 -2.499 15.100 1.00 45.85 N
ATOM 23 N3 G A 6 3.969 -3.197 14.735 1.00 47.44 N
ATOM 24 C4 G A 6 2.700 -2.738 14.689 1.00 48.18 C
ATOM 25 P A A 7 -0.817 -6.677 17.990 1.00 61.97 P
ATOM 26 OP1 A A 7 -2.239 -7.033 18.255 1.00 60.30 O
ATOM 27 OP2 A A 7 -0.303 -5.343 18.420 1.00 59.67 O
ATOM 28 O5' A A 7 0.090 -7.809 18.655 1.00 63.95 O
TER
ATOM 1 O3' C B 5 6.445 2.435 18.298 1.00 65.16 O
ATOM 2 P U B 6 7.288 1.605 17.210 1.00 65.76 P
ATOM 3 OP1 U B 6 8.426 2.460 16.792 1.00 65.79 O
ATOM 4 OP2 U B 6 6.355 1.071 16.184 1.00 65.93 O
ATOM 5 O5' U B 6 7.872 0.374 18.039 1.00 65.82 O
ATOM 6 C5' U B 6 8.864 0.571 19.048 1.00 63.00 C
ATOM 7 C4' U B 6 9.425 -0.760 19.495 1.00 61.73 C
ATOM 8 O4' U B 6 8.393 -1.526 20.172 1.00 60.79 O
ATOM 9 C3' U B 6 9.891 -1.674 18.374 1.00 61.49 C
ATOM 10 O3' U B 6 11.214 -1.344 17.962 1.00 61.86 O
ATOM 11 C2' U B 6 9.813 -3.049 19.024 1.00 59.73 C
ATOM 12 O2' U B 6 10.928 -3.303 19.847 1.00 58.45 O
ATOM 13 C1' U B 6 8.559 -2.907 19.892 1.00 59.18 C
ATOM 14 N1 U B 6 7.317 -3.402 19.276 1.00 58.82 N
ATOM 15 C2 U B 6 7.179 -4.775 19.093 1.00 59.35 C
ATOM 16 O2 U B 6 8.050 -5.578 19.403 1.00 60.15 O
ATOM 17 N3 U B 6 5.985 -5.170 18.527 1.00 57.80 N
ATOM 18 C4 U B 6 4.939 -4.351 18.131 1.00 57.82 C
ATOM 19 O4 U B 6 3.922 -4.856 17.647 1.00 56.93 O
ATOM 20 C5 U B 6 5.161 -2.948 18.347 1.00 57.79 C
ATOM 21 C6 U B 6 6.313 -2.532 18.896 1.00 58.45 C
ATOM 22 P A B 7 11.681 -1.676 16.466 1.00 62.59 P
ATOM 23 OP1 A B 7 13.108 -1.295 16.344 1.00 61.04 O
ATOM 24 OP2 A B 7 10.682 -1.101 15.521 1.00 62.60 O
ATOM 25 O5' A B 7 11.570 -3.263 16.402 1.00 62.89 O
TER
Atoms:
OP1: (-4.786,-4.149,14.204)
OP2: (-3.390,-2.011,14.472)
C3': (-0.159,-5.789,15.598)
C1': (1.507,-4.918,14.163)
C5': (-2.015,-5.544,13.835)
O6: (2.958,0.739,15.509)
O4': (0.348,-5.177,13.377)
C8: (0.511,-2.612,14.477)
C2: (4.834,-2.232,15.031)
C6: (3.175,-0.444,15.247)
C5: (2.243,-1.455,14.911)
C4: (2.700,-2.738,14.689)
P: (-3.539,-3.389,13.928)
C4': (-0.598,-5.972,14.149)
C2': (1.357,-5.716,15.463)
O2': (1.951,-6.988,15.320)
N1: (4.474,-0.933,15.277)
N2: (6.149,-2.499,15.100)
N3: (3.969,-3.197,14.735)
N7: (0.864,-1.390,14.769)
N9: (1.573,-3.484,14.423)
O5': (-2.276,-4.254,14.388)
O3': (-0.558,-6.889,16.408)
OP2: (-3.390,-2.011,14.472)
C3': (-0.159,-5.789,15.598)
C1': (1.507,-4.918,14.163)
C5': (-2.015,-5.544,13.835)
O6: (2.958,0.739,15.509)
O4': (0.348,-5.177,13.377)
C8: (0.511,-2.612,14.477)
C2: (4.834,-2.232,15.031)
C6: (3.175,-0.444,15.247)
C5: (2.243,-1.455,14.911)
C4: (2.700,-2.738,14.689)
P: (-3.539,-3.389,13.928)
C4': (-0.598,-5.972,14.149)
C2': (1.357,-5.716,15.463)
O2': (1.951,-6.988,15.320)
N1: (4.474,-0.933,15.277)
N2: (6.149,-2.499,15.100)
N3: (3.969,-3.197,14.735)
N7: (0.864,-1.390,14.769)
N9: (1.573,-3.484,14.423)
O5': (-2.276,-4.254,14.388)
O3': (-0.558,-6.889,16.408)
C4: (4.939,-4.351,18.131)
N3: (5.985,-5.170,18.527)
OP1: (8.426,2.460,16.792)
OP2: (6.355,1.071,16.184)
C2: (7.179,-4.775,19.093)
C1': (8.559,-2.907,19.892)
C3': (9.891,-1.674,18.374)
O5': (7.872,0.374,18.039)
O4': (8.393,-1.526,20.172)
C5': (8.864,0.571,19.048)
P: (7.288,1.605,17.210)
C4': (9.425,-0.760,19.495)
C2': (9.813,-3.049,19.024)
O2': (10.928,-3.303,19.847)
N1: (7.317,-3.402,19.276)
O4: (3.922,-4.856,17.647)
O2: (8.050,-5.578,19.403)
C6: (6.313,-2.532,18.896)
C5: (5.161,-2.948,18.347)
O3': (11.214,-1.344,17.962)
N3: (5.985,-5.170,18.527)
OP1: (8.426,2.460,16.792)
OP2: (6.355,1.071,16.184)
C2: (7.179,-4.775,19.093)
C1': (8.559,-2.907,19.892)
C3': (9.891,-1.674,18.374)
O5': (7.872,0.374,18.039)
O4': (8.393,-1.526,20.172)
C5': (8.864,0.571,19.048)
P: (7.288,1.605,17.210)
C4': (9.425,-0.760,19.495)
C2': (9.813,-3.049,19.024)
O2': (10.928,-3.303,19.847)
N1: (7.317,-3.402,19.276)
O4: (3.922,-4.856,17.647)
O2: (8.050,-5.578,19.403)
C6: (6.313,-2.532,18.896)
C5: (5.161,-2.948,18.347)
O3': (11.214,-1.344,17.962)
Image (generated by PyMOL):