Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTJ:0556:0577
Extra
PDB:
ATOM 1 O3' U A 555 4.113 92.511 107.444 1.00 51.60 O
ATOM 2 P G A 556 3.590 91.880 108.826 1.00 52.08 P
ATOM 3 OP1 G A 556 4.603 92.205 109.866 1.00 51.84 O
ATOM 4 OP2 G A 556 3.204 90.458 108.594 1.00 51.23 O
ATOM 5 O5' G A 556 2.273 92.716 109.140 1.00 52.46 O
ATOM 6 C5' G A 556 2.348 94.073 109.602 1.00 54.32 C
ATOM 7 C4' G A 556 0.955 94.630 109.809 1.00 55.92 C
ATOM 8 O4' G A 556 0.286 94.770 108.522 1.00 55.74 O
ATOM 9 C3' G A 556 0.004 93.746 110.602 1.00 57.01 C
ATOM 10 O3' G A 556 0.209 93.806 112.005 1.00 59.16 O
ATOM 11 C2' G A 556 -1.352 94.275 110.162 1.00 56.37 C
ATOM 12 O2' G A 556 -1.702 95.511 110.756 1.00 54.96 O
ATOM 13 C1' G A 556 -1.097 94.490 108.673 1.00 55.33 C
ATOM 14 N9 G A 556 -1.411 93.286 107.911 1.00 54.16 N
ATOM 15 C8 G A 556 -0.558 92.276 107.534 1.00 53.99 C
ATOM 16 N7 G A 556 -1.150 91.336 106.846 1.00 53.46 N
ATOM 17 C5 G A 556 -2.473 91.750 106.771 1.00 53.86 C
ATOM 18 C6 G A 556 -3.593 91.149 106.147 1.00 53.50 C
ATOM 19 O6 G A 556 -3.646 90.092 105.512 1.00 53.53 O
ATOM 20 N1 G A 556 -4.741 91.912 106.316 1.00 53.33 N
ATOM 21 C2 G A 556 -4.808 93.102 106.996 1.00 53.63 C
ATOM 22 N2 G A 556 -6.010 93.695 107.046 1.00 54.19 N
ATOM 23 N3 G A 556 -3.775 93.673 107.581 1.00 53.53 N
ATOM 24 C4 G A 556 -2.648 92.949 107.429 1.00 53.97 C
ATOM 25 P A A 557 -0.229 92.558 112.923 1.00 60.76 P
ATOM 26 OP1 A A 557 0.422 92.745 114.242 1.00 61.28 O
ATOM 27 OP2 A A 557 -0.043 91.275 112.187 1.00 59.16 O
ATOM 28 O5' A A 557 -1.789 92.785 113.118 1.00 61.26 O
TER
ATOM 1 O3' G B 576 -8.060 89.130 106.411 1.00 70.01 O
ATOM 2 P U B 577 -8.347 90.106 105.162 1.00 69.25 P
ATOM 3 OP1 U B 577 -8.856 89.294 104.024 1.00 68.51 O
ATOM 4 OP2 U B 577 -7.161 90.976 104.970 1.00 69.41 O
ATOM 5 O5' U B 577 -9.502 91.065 105.693 1.00 68.97 O
ATOM 6 C5' U B 577 -10.754 90.543 106.190 1.00 67.88 C
ATOM 7 C4' U B 577 -11.220 91.366 107.364 1.00 67.20 C
ATOM 8 O4' U B 577 -10.495 90.975 108.555 1.00 67.25 O
ATOM 9 C3' U B 577 -10.931 92.849 107.230 1.00 67.30 C
ATOM 10 O3' U B 577 -11.906 93.511 106.431 1.00 67.16 O
ATOM 11 C2' U B 577 -10.906 93.324 108.680 1.00 67.47 C
ATOM 12 O2' U B 577 -12.185 93.610 109.201 1.00 68.11 O
ATOM 13 C1' U B 577 -10.322 92.103 109.398 1.00 67.21 C
ATOM 14 N1 U B 577 -8.905 92.197 109.791 1.00 67.22 N
ATOM 15 C2 U B 577 -8.555 93.144 110.745 1.00 67.29 C
ATOM 16 O2 U B 577 -9.355 93.911 111.247 1.00 67.63 O
ATOM 17 N3 U B 577 -7.226 93.159 111.089 1.00 67.18 N
ATOM 18 C4 U B 577 -6.225 92.351 110.590 1.00 67.33 C
ATOM 19 O4 U B 577 -5.075 92.485 111.011 1.00 67.34 O
ATOM 20 C5 U B 577 -6.658 91.405 109.602 1.00 67.45 C
ATOM 21 C6 U B 577 -7.950 91.363 109.244 1.00 67.73 C
ATOM 22 P A B 578 -11.510 94.858 105.649 1.00 67.73 P
ATOM 23 OP1 A B 578 -12.685 95.344 104.894 1.00 67.84 O
ATOM 24 OP2 A B 578 -10.241 94.613 104.928 1.00 68.34 O
ATOM 25 O5' A B 578 -11.238 95.897 106.820 1.00 66.19 O
TER
ATOM 2 P G A 556 3.590 91.880 108.826 1.00 52.08 P
ATOM 3 OP1 G A 556 4.603 92.205 109.866 1.00 51.84 O
ATOM 4 OP2 G A 556 3.204 90.458 108.594 1.00 51.23 O
ATOM 5 O5' G A 556 2.273 92.716 109.140 1.00 52.46 O
ATOM 6 C5' G A 556 2.348 94.073 109.602 1.00 54.32 C
ATOM 7 C4' G A 556 0.955 94.630 109.809 1.00 55.92 C
ATOM 8 O4' G A 556 0.286 94.770 108.522 1.00 55.74 O
ATOM 9 C3' G A 556 0.004 93.746 110.602 1.00 57.01 C
ATOM 10 O3' G A 556 0.209 93.806 112.005 1.00 59.16 O
ATOM 11 C2' G A 556 -1.352 94.275 110.162 1.00 56.37 C
ATOM 12 O2' G A 556 -1.702 95.511 110.756 1.00 54.96 O
ATOM 13 C1' G A 556 -1.097 94.490 108.673 1.00 55.33 C
ATOM 14 N9 G A 556 -1.411 93.286 107.911 1.00 54.16 N
ATOM 15 C8 G A 556 -0.558 92.276 107.534 1.00 53.99 C
ATOM 16 N7 G A 556 -1.150 91.336 106.846 1.00 53.46 N
ATOM 17 C5 G A 556 -2.473 91.750 106.771 1.00 53.86 C
ATOM 18 C6 G A 556 -3.593 91.149 106.147 1.00 53.50 C
ATOM 19 O6 G A 556 -3.646 90.092 105.512 1.00 53.53 O
ATOM 20 N1 G A 556 -4.741 91.912 106.316 1.00 53.33 N
ATOM 21 C2 G A 556 -4.808 93.102 106.996 1.00 53.63 C
ATOM 22 N2 G A 556 -6.010 93.695 107.046 1.00 54.19 N
ATOM 23 N3 G A 556 -3.775 93.673 107.581 1.00 53.53 N
ATOM 24 C4 G A 556 -2.648 92.949 107.429 1.00 53.97 C
ATOM 25 P A A 557 -0.229 92.558 112.923 1.00 60.76 P
ATOM 26 OP1 A A 557 0.422 92.745 114.242 1.00 61.28 O
ATOM 27 OP2 A A 557 -0.043 91.275 112.187 1.00 59.16 O
ATOM 28 O5' A A 557 -1.789 92.785 113.118 1.00 61.26 O
TER
ATOM 1 O3' G B 576 -8.060 89.130 106.411 1.00 70.01 O
ATOM 2 P U B 577 -8.347 90.106 105.162 1.00 69.25 P
ATOM 3 OP1 U B 577 -8.856 89.294 104.024 1.00 68.51 O
ATOM 4 OP2 U B 577 -7.161 90.976 104.970 1.00 69.41 O
ATOM 5 O5' U B 577 -9.502 91.065 105.693 1.00 68.97 O
ATOM 6 C5' U B 577 -10.754 90.543 106.190 1.00 67.88 C
ATOM 7 C4' U B 577 -11.220 91.366 107.364 1.00 67.20 C
ATOM 8 O4' U B 577 -10.495 90.975 108.555 1.00 67.25 O
ATOM 9 C3' U B 577 -10.931 92.849 107.230 1.00 67.30 C
ATOM 10 O3' U B 577 -11.906 93.511 106.431 1.00 67.16 O
ATOM 11 C2' U B 577 -10.906 93.324 108.680 1.00 67.47 C
ATOM 12 O2' U B 577 -12.185 93.610 109.201 1.00 68.11 O
ATOM 13 C1' U B 577 -10.322 92.103 109.398 1.00 67.21 C
ATOM 14 N1 U B 577 -8.905 92.197 109.791 1.00 67.22 N
ATOM 15 C2 U B 577 -8.555 93.144 110.745 1.00 67.29 C
ATOM 16 O2 U B 577 -9.355 93.911 111.247 1.00 67.63 O
ATOM 17 N3 U B 577 -7.226 93.159 111.089 1.00 67.18 N
ATOM 18 C4 U B 577 -6.225 92.351 110.590 1.00 67.33 C
ATOM 19 O4 U B 577 -5.075 92.485 111.011 1.00 67.34 O
ATOM 20 C5 U B 577 -6.658 91.405 109.602 1.00 67.45 C
ATOM 21 C6 U B 577 -7.950 91.363 109.244 1.00 67.73 C
ATOM 22 P A B 578 -11.510 94.858 105.649 1.00 67.73 P
ATOM 23 OP1 A B 578 -12.685 95.344 104.894 1.00 67.84 O
ATOM 24 OP2 A B 578 -10.241 94.613 104.928 1.00 68.34 O
ATOM 25 O5' A B 578 -11.238 95.897 106.820 1.00 66.19 O
TER
Atoms:
OP1: (4.603,92.205,109.866)
OP2: (3.204,90.458,108.594)
C3': (0.004,93.746,110.602)
C1': (-1.097,94.490,108.673)
C5': (2.348,94.073,109.602)
O6: (-3.646,90.092,105.512)
O4': (0.286,94.770,108.522)
C8: (-0.558,92.276,107.534)
C2: (-4.808,93.102,106.996)
C6: (-3.593,91.149,106.147)
C5: (-2.473,91.750,106.771)
C4: (-2.648,92.949,107.429)
P: (3.590,91.880,108.826)
C4': (0.955,94.630,109.809)
C2': (-1.352,94.275,110.162)
O2': (-1.702,95.511,110.756)
N1: (-4.741,91.912,106.316)
N2: (-6.010,93.695,107.046)
N3: (-3.775,93.673,107.581)
N7: (-1.150,91.336,106.846)
N9: (-1.411,93.286,107.911)
O5': (2.273,92.716,109.140)
O3': (0.209,93.806,112.005)
OP2: (3.204,90.458,108.594)
C3': (0.004,93.746,110.602)
C1': (-1.097,94.490,108.673)
C5': (2.348,94.073,109.602)
O6: (-3.646,90.092,105.512)
O4': (0.286,94.770,108.522)
C8: (-0.558,92.276,107.534)
C2: (-4.808,93.102,106.996)
C6: (-3.593,91.149,106.147)
C5: (-2.473,91.750,106.771)
C4: (-2.648,92.949,107.429)
P: (3.590,91.880,108.826)
C4': (0.955,94.630,109.809)
C2': (-1.352,94.275,110.162)
O2': (-1.702,95.511,110.756)
N1: (-4.741,91.912,106.316)
N2: (-6.010,93.695,107.046)
N3: (-3.775,93.673,107.581)
N7: (-1.150,91.336,106.846)
N9: (-1.411,93.286,107.911)
O5': (2.273,92.716,109.140)
O3': (0.209,93.806,112.005)
C4: (-6.225,92.351,110.590)
N3: (-7.226,93.159,111.089)
OP1: (-8.856,89.294,104.024)
OP2: (-7.161,90.976,104.970)
C2: (-8.555,93.144,110.745)
C1': (-10.322,92.103,109.398)
C3': (-10.931,92.849,107.230)
O5': (-9.502,91.065,105.693)
O4': (-10.495,90.975,108.555)
C5': (-10.754,90.543,106.190)
P: (-8.347,90.106,105.162)
C4': (-11.220,91.366,107.364)
C2': (-10.906,93.324,108.680)
O2': (-12.185,93.610,109.201)
N1: (-8.905,92.197,109.791)
O4: (-5.075,92.485,111.011)
O2: (-9.355,93.911,111.247)
C6: (-7.950,91.363,109.244)
C5: (-6.658,91.405,109.602)
O3': (-11.906,93.511,106.431)
N3: (-7.226,93.159,111.089)
OP1: (-8.856,89.294,104.024)
OP2: (-7.161,90.976,104.970)
C2: (-8.555,93.144,110.745)
C1': (-10.322,92.103,109.398)
C3': (-10.931,92.849,107.230)
O5': (-9.502,91.065,105.693)
O4': (-10.495,90.975,108.555)
C5': (-10.754,90.543,106.190)
P: (-8.347,90.106,105.162)
C4': (-11.220,91.366,107.364)
C2': (-10.906,93.324,108.680)
O2': (-12.185,93.610,109.201)
N1: (-8.905,92.197,109.791)
O4: (-5.075,92.485,111.011)
O2: (-9.355,93.911,111.247)
C6: (-7.950,91.363,109.244)
C5: (-6.658,91.405,109.602)
O3': (-11.906,93.511,106.431)
Image (generated by PyMOL):