Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0292:0334
Extra
PDB:
ATOM 1 O3' C A 291 22.645 140.950 16.188 1.00 68.37 O
ATOM 2 P G A 292 21.659 141.305 17.407 1.00 71.75 P
ATOM 3 OP1 G A 292 20.517 142.097 16.873 1.00 72.81 O
ATOM 4 OP2 G A 292 22.474 141.858 18.522 1.00 72.18 O
ATOM 5 O5' G A 292 21.103 139.883 17.864 1.00 70.94 O
ATOM 6 C5' G A 292 20.423 139.011 16.937 1.00 68.00 C
ATOM 7 C4' G A 292 20.223 137.651 17.561 1.00 65.66 C
ATOM 8 O4' G A 292 21.520 137.053 17.819 1.00 64.76 O
ATOM 9 C3' G A 292 19.533 137.677 18.916 1.00 64.04 C
ATOM 10 O3' G A 292 18.120 137.657 18.770 1.00 63.27 O
ATOM 11 C2' G A 292 20.053 136.408 19.572 1.00 63.86 C
ATOM 12 O2' G A 292 19.385 135.257 19.102 1.00 63.52 O
ATOM 13 C1' G A 292 21.497 136.380 19.065 1.00 63.88 C
ATOM 14 N9 G A 292 22.461 137.035 19.945 1.00 63.21 N
ATOM 15 C8 G A 292 22.671 138.387 20.087 1.00 62.36 C
ATOM 16 N7 G A 292 23.637 138.671 20.918 1.00 62.95 N
ATOM 17 C5 G A 292 24.087 137.432 21.359 1.00 62.94 C
ATOM 18 C6 G A 292 25.133 137.100 22.263 1.00 62.04 C
ATOM 19 O6 G A 292 25.907 137.860 22.862 1.00 62.58 O
ATOM 20 N1 G A 292 25.241 135.723 22.434 1.00 60.03 N
ATOM 21 C2 G A 292 24.453 134.786 21.811 1.00 60.73 C
ATOM 22 N2 G A 292 24.705 133.503 22.107 1.00 61.09 N
ATOM 23 N3 G A 292 23.488 135.081 20.962 1.00 61.91 N
ATOM 24 C4 G A 292 23.361 136.413 20.782 1.00 62.85 C
ATOM 25 P A A 293 17.210 138.652 19.645 1.00 63.44 P
ATOM 26 OP1 A A 293 16.946 139.860 18.826 1.00 63.81 O
ATOM 27 OP2 A A 293 17.825 138.801 20.987 1.00 64.60 O
ATOM 28 O5' A A 293 15.837 137.862 19.809 1.00 62.51 O
TER
ATOM 1 O3' G B 333 27.674 135.187 26.617 1.00 43.33 O
ATOM 2 P U B 334 27.723 133.970 25.577 1.00 47.28 P
ATOM 3 OP1 U B 334 29.052 133.318 25.704 1.00 47.61 O
ATOM 4 OP2 U B 334 27.284 134.470 24.251 1.00 46.95 O
ATOM 5 O5' U B 334 26.619 132.956 26.121 1.00 47.55 O
ATOM 6 C5' U B 334 26.890 132.090 27.239 1.00 45.36 C
ATOM 7 C4' U B 334 25.742 131.139 27.444 1.00 44.87 C
ATOM 8 O4' U B 334 24.560 131.890 27.821 1.00 46.53 O
ATOM 9 C3' U B 334 25.337 130.376 26.198 1.00 43.80 C
ATOM 10 O3' U B 334 26.145 129.216 26.028 1.00 41.77 O
ATOM 11 C2' U B 334 23.870 130.070 26.469 1.00 46.05 C
ATOM 12 O2' U B 334 23.677 128.996 27.364 1.00 46.34 O
ATOM 13 C1' U B 334 23.425 131.357 27.166 1.00 47.64 C
ATOM 14 N1 U B 334 22.896 132.386 26.253 1.00 51.48 N
ATOM 15 C2 U B 334 21.637 132.188 25.711 1.00 52.07 C
ATOM 16 O2 U B 334 20.973 131.189 25.927 1.00 52.49 O
ATOM 17 N3 U B 334 21.185 133.202 24.902 1.00 53.60 N
ATOM 18 C4 U B 334 21.846 134.367 24.577 1.00 53.74 C
ATOM 19 O4 U B 334 21.265 135.230 23.913 1.00 52.28 O
ATOM 20 C5 U B 334 23.153 134.488 25.154 1.00 54.21 C
ATOM 21 C6 U B 334 23.620 133.520 25.950 1.00 52.55 C
ATOM 22 P A B 335 26.732 128.861 24.579 1.00 42.01 P
ATOM 23 OP1 A B 335 27.758 127.795 24.711 1.00 41.21 O
ATOM 24 OP2 A B 335 27.095 130.141 23.923 1.00 43.27 O
ATOM 25 O5' A B 335 25.477 128.243 23.818 1.00 45.58 O
TER
ATOM 2 P G A 292 21.659 141.305 17.407 1.00 71.75 P
ATOM 3 OP1 G A 292 20.517 142.097 16.873 1.00 72.81 O
ATOM 4 OP2 G A 292 22.474 141.858 18.522 1.00 72.18 O
ATOM 5 O5' G A 292 21.103 139.883 17.864 1.00 70.94 O
ATOM 6 C5' G A 292 20.423 139.011 16.937 1.00 68.00 C
ATOM 7 C4' G A 292 20.223 137.651 17.561 1.00 65.66 C
ATOM 8 O4' G A 292 21.520 137.053 17.819 1.00 64.76 O
ATOM 9 C3' G A 292 19.533 137.677 18.916 1.00 64.04 C
ATOM 10 O3' G A 292 18.120 137.657 18.770 1.00 63.27 O
ATOM 11 C2' G A 292 20.053 136.408 19.572 1.00 63.86 C
ATOM 12 O2' G A 292 19.385 135.257 19.102 1.00 63.52 O
ATOM 13 C1' G A 292 21.497 136.380 19.065 1.00 63.88 C
ATOM 14 N9 G A 292 22.461 137.035 19.945 1.00 63.21 N
ATOM 15 C8 G A 292 22.671 138.387 20.087 1.00 62.36 C
ATOM 16 N7 G A 292 23.637 138.671 20.918 1.00 62.95 N
ATOM 17 C5 G A 292 24.087 137.432 21.359 1.00 62.94 C
ATOM 18 C6 G A 292 25.133 137.100 22.263 1.00 62.04 C
ATOM 19 O6 G A 292 25.907 137.860 22.862 1.00 62.58 O
ATOM 20 N1 G A 292 25.241 135.723 22.434 1.00 60.03 N
ATOM 21 C2 G A 292 24.453 134.786 21.811 1.00 60.73 C
ATOM 22 N2 G A 292 24.705 133.503 22.107 1.00 61.09 N
ATOM 23 N3 G A 292 23.488 135.081 20.962 1.00 61.91 N
ATOM 24 C4 G A 292 23.361 136.413 20.782 1.00 62.85 C
ATOM 25 P A A 293 17.210 138.652 19.645 1.00 63.44 P
ATOM 26 OP1 A A 293 16.946 139.860 18.826 1.00 63.81 O
ATOM 27 OP2 A A 293 17.825 138.801 20.987 1.00 64.60 O
ATOM 28 O5' A A 293 15.837 137.862 19.809 1.00 62.51 O
TER
ATOM 1 O3' G B 333 27.674 135.187 26.617 1.00 43.33 O
ATOM 2 P U B 334 27.723 133.970 25.577 1.00 47.28 P
ATOM 3 OP1 U B 334 29.052 133.318 25.704 1.00 47.61 O
ATOM 4 OP2 U B 334 27.284 134.470 24.251 1.00 46.95 O
ATOM 5 O5' U B 334 26.619 132.956 26.121 1.00 47.55 O
ATOM 6 C5' U B 334 26.890 132.090 27.239 1.00 45.36 C
ATOM 7 C4' U B 334 25.742 131.139 27.444 1.00 44.87 C
ATOM 8 O4' U B 334 24.560 131.890 27.821 1.00 46.53 O
ATOM 9 C3' U B 334 25.337 130.376 26.198 1.00 43.80 C
ATOM 10 O3' U B 334 26.145 129.216 26.028 1.00 41.77 O
ATOM 11 C2' U B 334 23.870 130.070 26.469 1.00 46.05 C
ATOM 12 O2' U B 334 23.677 128.996 27.364 1.00 46.34 O
ATOM 13 C1' U B 334 23.425 131.357 27.166 1.00 47.64 C
ATOM 14 N1 U B 334 22.896 132.386 26.253 1.00 51.48 N
ATOM 15 C2 U B 334 21.637 132.188 25.711 1.00 52.07 C
ATOM 16 O2 U B 334 20.973 131.189 25.927 1.00 52.49 O
ATOM 17 N3 U B 334 21.185 133.202 24.902 1.00 53.60 N
ATOM 18 C4 U B 334 21.846 134.367 24.577 1.00 53.74 C
ATOM 19 O4 U B 334 21.265 135.230 23.913 1.00 52.28 O
ATOM 20 C5 U B 334 23.153 134.488 25.154 1.00 54.21 C
ATOM 21 C6 U B 334 23.620 133.520 25.950 1.00 52.55 C
ATOM 22 P A B 335 26.732 128.861 24.579 1.00 42.01 P
ATOM 23 OP1 A B 335 27.758 127.795 24.711 1.00 41.21 O
ATOM 24 OP2 A B 335 27.095 130.141 23.923 1.00 43.27 O
ATOM 25 O5' A B 335 25.477 128.243 23.818 1.00 45.58 O
TER
Atoms:
OP1: (20.517,142.097,16.873)
OP2: (22.474,141.858,18.522)
C3': (19.533,137.677,18.916)
C1': (21.497,136.380,19.065)
C5': (20.423,139.011,16.937)
O6: (25.907,137.860,22.862)
O4': (21.520,137.053,17.819)
C8: (22.671,138.387,20.087)
C2: (24.453,134.786,21.811)
C6: (25.133,137.100,22.263)
C5: (24.087,137.432,21.359)
C4: (23.361,136.413,20.782)
P: (21.659,141.305,17.407)
C4': (20.223,137.651,17.561)
C2': (20.053,136.408,19.572)
O2': (19.385,135.257,19.102)
N1: (25.241,135.723,22.434)
N2: (24.705,133.503,22.107)
N3: (23.488,135.081,20.962)
N7: (23.637,138.671,20.918)
N9: (22.461,137.035,19.945)
O5': (21.103,139.883,17.864)
O3': (18.120,137.657,18.770)
OP2: (22.474,141.858,18.522)
C3': (19.533,137.677,18.916)
C1': (21.497,136.380,19.065)
C5': (20.423,139.011,16.937)
O6: (25.907,137.860,22.862)
O4': (21.520,137.053,17.819)
C8: (22.671,138.387,20.087)
C2: (24.453,134.786,21.811)
C6: (25.133,137.100,22.263)
C5: (24.087,137.432,21.359)
C4: (23.361,136.413,20.782)
P: (21.659,141.305,17.407)
C4': (20.223,137.651,17.561)
C2': (20.053,136.408,19.572)
O2': (19.385,135.257,19.102)
N1: (25.241,135.723,22.434)
N2: (24.705,133.503,22.107)
N3: (23.488,135.081,20.962)
N7: (23.637,138.671,20.918)
N9: (22.461,137.035,19.945)
O5': (21.103,139.883,17.864)
O3': (18.120,137.657,18.770)
C4: (21.846,134.367,24.577)
N3: (21.185,133.202,24.902)
OP1: (29.052,133.318,25.704)
OP2: (27.284,134.470,24.251)
C2: (21.637,132.188,25.711)
C1': (23.425,131.357,27.166)
C3': (25.337,130.376,26.198)
O5': (26.619,132.956,26.121)
O4': (24.560,131.890,27.821)
C5': (26.890,132.090,27.239)
P: (27.723,133.970,25.577)
C4': (25.742,131.139,27.444)
C2': (23.870,130.070,26.469)
O2': (23.677,128.996,27.364)
N1: (22.896,132.386,26.253)
O4: (21.265,135.230,23.913)
O2: (20.973,131.189,25.927)
C6: (23.620,133.520,25.950)
C5: (23.153,134.488,25.154)
O3': (26.145,129.216,26.028)
N3: (21.185,133.202,24.902)
OP1: (29.052,133.318,25.704)
OP2: (27.284,134.470,24.251)
C2: (21.637,132.188,25.711)
C1': (23.425,131.357,27.166)
C3': (25.337,130.376,26.198)
O5': (26.619,132.956,26.121)
O4': (24.560,131.890,27.821)
C5': (26.890,132.090,27.239)
P: (27.723,133.970,25.577)
C4': (25.742,131.139,27.444)
C2': (23.870,130.070,26.469)
O2': (23.677,128.996,27.364)
N1: (22.896,132.386,26.253)
O4: (21.265,135.230,23.913)
O2: (20.973,131.189,25.927)
C6: (23.620,133.520,25.950)
C5: (23.153,134.488,25.154)
O3': (26.145,129.216,26.028)
Image (generated by PyMOL):