Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0280:0347
Extra
PDB:
ATOM 1 O3' C A 279 55.318 129.235 -1.925 1.00 94.46 O
ATOM 2 P G A 280 54.658 130.014 -0.688 1.00 94.02 P
ATOM 3 OP1 G A 280 53.608 130.917 -1.235 1.00 93.24 O
ATOM 4 OP2 G A 280 55.760 130.582 0.134 1.00 94.37 O
ATOM 5 O5' G A 280 53.943 128.859 0.146 1.00 94.00 O
ATOM 6 C5' G A 280 52.790 128.166 -0.379 1.00 92.71 C
ATOM 7 C4' G A 280 52.408 127.015 0.525 1.00 92.01 C
ATOM 8 O4' G A 280 53.465 126.015 0.521 1.00 91.49 O
ATOM 9 C3' G A 280 52.238 127.357 1.997 1.00 91.95 C
ATOM 10 O3' G A 280 50.978 127.955 2.285 1.00 93.05 O
ATOM 11 C2' G A 280 52.441 126.000 2.658 1.00 91.11 C
ATOM 12 O2' G A 280 51.319 125.148 2.535 1.00 91.25 O
ATOM 13 C1' G A 280 53.585 125.439 1.815 1.00 90.00 C
ATOM 14 N9 G A 280 54.892 125.808 2.353 1.00 88.74 N
ATOM 15 C8 G A 280 55.561 126.997 2.162 1.00 87.97 C
ATOM 16 N7 G A 280 56.715 127.038 2.768 1.00 87.31 N
ATOM 17 C5 G A 280 56.818 125.805 3.397 1.00 87.53 C
ATOM 18 C6 G A 280 57.858 125.269 4.199 1.00 87.26 C
ATOM 19 O6 G A 280 58.934 125.790 4.513 1.00 86.89 O
ATOM 20 N1 G A 280 57.551 123.985 4.642 1.00 86.53 N
ATOM 21 C2 G A 280 56.397 123.301 4.346 1.00 86.09 C
ATOM 22 N2 G A 280 56.289 122.073 4.868 1.00 85.97 N
ATOM 23 N3 G A 280 55.423 123.786 3.594 1.00 86.25 N
ATOM 24 C4 G A 280 55.698 125.034 3.156 1.00 87.69 C
ATOM 25 P A A 281 50.778 128.770 3.661 1.00 93.75 P
ATOM 26 OP1 A A 281 49.502 129.534 3.541 1.00 93.05 O
ATOM 27 OP2 A A 281 52.042 129.496 3.964 1.00 92.68 O
ATOM 28 O5' A A 281 50.610 127.613 4.748 1.00 93.12 O
TER
ATOM 1 O3' G B 346 58.795 123.701 8.618 1.00 92.05 O
ATOM 2 P U B 347 59.677 122.581 7.857 1.00 91.92 P
ATOM 3 OP1 U B 347 60.977 122.395 8.557 1.00 92.53 O
ATOM 4 OP2 U B 347 59.664 122.900 6.407 1.00 92.97 O
ATOM 5 O5' U B 347 58.815 121.251 8.020 1.00 91.29 O
ATOM 6 C5' U B 347 58.951 120.408 9.180 1.00 91.10 C
ATOM 7 C4' U B 347 57.631 119.749 9.498 1.00 90.82 C
ATOM 8 O4' U B 347 56.667 120.771 9.847 1.00 90.02 O
ATOM 9 C3' U B 347 56.982 118.983 8.354 1.00 91.52 C
ATOM 10 O3' U B 347 57.516 117.656 8.288 1.00 94.19 O
ATOM 11 C2' U B 347 55.506 119.003 8.742 1.00 89.87 C
ATOM 12 O2' U B 347 55.179 118.033 9.713 1.00 89.32 O
ATOM 13 C1' U B 347 55.381 120.378 9.404 1.00 89.48 C
ATOM 14 N1 U B 347 54.806 121.459 8.585 1.00 88.84 N
ATOM 15 C2 U B 347 53.451 121.389 8.284 1.00 88.15 C
ATOM 16 O2 U B 347 52.737 120.457 8.626 1.00 87.33 O
ATOM 17 N3 U B 347 52.962 122.455 7.568 1.00 87.62 N
ATOM 18 C4 U B 347 53.666 123.557 7.128 1.00 87.38 C
ATOM 19 O4 U B 347 53.073 124.443 6.509 1.00 87.04 O
ATOM 20 C5 U B 347 55.061 123.547 7.453 1.00 86.85 C
ATOM 21 C6 U B 347 55.572 122.525 8.148 1.00 87.85 C
ATOM 22 P A B 348 57.530 116.852 6.889 1.00 95.79 P
ATOM 23 OP1 A B 348 58.130 115.518 7.186 1.00 94.31 O
ATOM 24 OP2 A B 348 58.133 117.704 5.830 1.00 95.11 O
ATOM 25 O5' A B 348 55.984 116.663 6.539 1.00 94.83 O
TER
ATOM 2 P G A 280 54.658 130.014 -0.688 1.00 94.02 P
ATOM 3 OP1 G A 280 53.608 130.917 -1.235 1.00 93.24 O
ATOM 4 OP2 G A 280 55.760 130.582 0.134 1.00 94.37 O
ATOM 5 O5' G A 280 53.943 128.859 0.146 1.00 94.00 O
ATOM 6 C5' G A 280 52.790 128.166 -0.379 1.00 92.71 C
ATOM 7 C4' G A 280 52.408 127.015 0.525 1.00 92.01 C
ATOM 8 O4' G A 280 53.465 126.015 0.521 1.00 91.49 O
ATOM 9 C3' G A 280 52.238 127.357 1.997 1.00 91.95 C
ATOM 10 O3' G A 280 50.978 127.955 2.285 1.00 93.05 O
ATOM 11 C2' G A 280 52.441 126.000 2.658 1.00 91.11 C
ATOM 12 O2' G A 280 51.319 125.148 2.535 1.00 91.25 O
ATOM 13 C1' G A 280 53.585 125.439 1.815 1.00 90.00 C
ATOM 14 N9 G A 280 54.892 125.808 2.353 1.00 88.74 N
ATOM 15 C8 G A 280 55.561 126.997 2.162 1.00 87.97 C
ATOM 16 N7 G A 280 56.715 127.038 2.768 1.00 87.31 N
ATOM 17 C5 G A 280 56.818 125.805 3.397 1.00 87.53 C
ATOM 18 C6 G A 280 57.858 125.269 4.199 1.00 87.26 C
ATOM 19 O6 G A 280 58.934 125.790 4.513 1.00 86.89 O
ATOM 20 N1 G A 280 57.551 123.985 4.642 1.00 86.53 N
ATOM 21 C2 G A 280 56.397 123.301 4.346 1.00 86.09 C
ATOM 22 N2 G A 280 56.289 122.073 4.868 1.00 85.97 N
ATOM 23 N3 G A 280 55.423 123.786 3.594 1.00 86.25 N
ATOM 24 C4 G A 280 55.698 125.034 3.156 1.00 87.69 C
ATOM 25 P A A 281 50.778 128.770 3.661 1.00 93.75 P
ATOM 26 OP1 A A 281 49.502 129.534 3.541 1.00 93.05 O
ATOM 27 OP2 A A 281 52.042 129.496 3.964 1.00 92.68 O
ATOM 28 O5' A A 281 50.610 127.613 4.748 1.00 93.12 O
TER
ATOM 1 O3' G B 346 58.795 123.701 8.618 1.00 92.05 O
ATOM 2 P U B 347 59.677 122.581 7.857 1.00 91.92 P
ATOM 3 OP1 U B 347 60.977 122.395 8.557 1.00 92.53 O
ATOM 4 OP2 U B 347 59.664 122.900 6.407 1.00 92.97 O
ATOM 5 O5' U B 347 58.815 121.251 8.020 1.00 91.29 O
ATOM 6 C5' U B 347 58.951 120.408 9.180 1.00 91.10 C
ATOM 7 C4' U B 347 57.631 119.749 9.498 1.00 90.82 C
ATOM 8 O4' U B 347 56.667 120.771 9.847 1.00 90.02 O
ATOM 9 C3' U B 347 56.982 118.983 8.354 1.00 91.52 C
ATOM 10 O3' U B 347 57.516 117.656 8.288 1.00 94.19 O
ATOM 11 C2' U B 347 55.506 119.003 8.742 1.00 89.87 C
ATOM 12 O2' U B 347 55.179 118.033 9.713 1.00 89.32 O
ATOM 13 C1' U B 347 55.381 120.378 9.404 1.00 89.48 C
ATOM 14 N1 U B 347 54.806 121.459 8.585 1.00 88.84 N
ATOM 15 C2 U B 347 53.451 121.389 8.284 1.00 88.15 C
ATOM 16 O2 U B 347 52.737 120.457 8.626 1.00 87.33 O
ATOM 17 N3 U B 347 52.962 122.455 7.568 1.00 87.62 N
ATOM 18 C4 U B 347 53.666 123.557 7.128 1.00 87.38 C
ATOM 19 O4 U B 347 53.073 124.443 6.509 1.00 87.04 O
ATOM 20 C5 U B 347 55.061 123.547 7.453 1.00 86.85 C
ATOM 21 C6 U B 347 55.572 122.525 8.148 1.00 87.85 C
ATOM 22 P A B 348 57.530 116.852 6.889 1.00 95.79 P
ATOM 23 OP1 A B 348 58.130 115.518 7.186 1.00 94.31 O
ATOM 24 OP2 A B 348 58.133 117.704 5.830 1.00 95.11 O
ATOM 25 O5' A B 348 55.984 116.663 6.539 1.00 94.83 O
TER
Atoms:
OP1: (53.608,130.917,-1.235)
OP2: (55.760,130.582,0.134)
C3': (52.238,127.357,1.997)
C1': (53.585,125.439,1.815)
C5': (52.790,128.166,-0.379)
O6: (58.934,125.790,4.513)
O4': (53.465,126.015,0.521)
C8: (55.561,126.997,2.162)
C2: (56.397,123.301,4.346)
C6: (57.858,125.269,4.199)
C5: (56.818,125.805,3.397)
C4: (55.698,125.034,3.156)
P: (54.658,130.014,-0.688)
C4': (52.408,127.015,0.525)
C2': (52.441,126.000,2.658)
O2': (51.319,125.148,2.535)
N1: (57.551,123.985,4.642)
N2: (56.289,122.073,4.868)
N3: (55.423,123.786,3.594)
N7: (56.715,127.038,2.768)
N9: (54.892,125.808,2.353)
O5': (53.943,128.859,0.146)
O3': (50.978,127.955,2.285)
OP2: (55.760,130.582,0.134)
C3': (52.238,127.357,1.997)
C1': (53.585,125.439,1.815)
C5': (52.790,128.166,-0.379)
O6: (58.934,125.790,4.513)
O4': (53.465,126.015,0.521)
C8: (55.561,126.997,2.162)
C2: (56.397,123.301,4.346)
C6: (57.858,125.269,4.199)
C5: (56.818,125.805,3.397)
C4: (55.698,125.034,3.156)
P: (54.658,130.014,-0.688)
C4': (52.408,127.015,0.525)
C2': (52.441,126.000,2.658)
O2': (51.319,125.148,2.535)
N1: (57.551,123.985,4.642)
N2: (56.289,122.073,4.868)
N3: (55.423,123.786,3.594)
N7: (56.715,127.038,2.768)
N9: (54.892,125.808,2.353)
O5': (53.943,128.859,0.146)
O3': (50.978,127.955,2.285)
C4: (53.666,123.557,7.128)
N3: (52.962,122.455,7.568)
OP1: (60.977,122.395,8.557)
OP2: (59.664,122.900,6.407)
C2: (53.451,121.389,8.284)
C1': (55.381,120.378,9.404)
C3': (56.982,118.983,8.354)
O5': (58.815,121.251,8.020)
O4': (56.667,120.771,9.847)
C5': (58.951,120.408,9.180)
P: (59.677,122.581,7.857)
C4': (57.631,119.749,9.498)
C2': (55.506,119.003,8.742)
O2': (55.179,118.033,9.713)
N1: (54.806,121.459,8.585)
O4: (53.073,124.443,6.509)
O2: (52.737,120.457,8.626)
C6: (55.572,122.525,8.148)
C5: (55.061,123.547,7.453)
O3': (57.516,117.656,8.288)
N3: (52.962,122.455,7.568)
OP1: (60.977,122.395,8.557)
OP2: (59.664,122.900,6.407)
C2: (53.451,121.389,8.284)
C1': (55.381,120.378,9.404)
C3': (56.982,118.983,8.354)
O5': (58.815,121.251,8.020)
O4': (56.667,120.771,9.847)
C5': (58.951,120.408,9.180)
P: (59.677,122.581,7.857)
C4': (57.631,119.749,9.498)
C2': (55.506,119.003,8.742)
O2': (55.179,118.033,9.713)
N1: (54.806,121.459,8.585)
O4: (53.073,124.443,6.509)
O2: (52.737,120.457,8.626)
C6: (55.572,122.525,8.148)
C5: (55.061,123.547,7.453)
O3': (57.516,117.656,8.288)
Image (generated by PyMOL):