Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1960:A1923
Extra
PDB:
ATOM 1 O3' C A1959 -37.576 120.725 123.783 1.00 0.33 O
ATOM 2 P G A1960 -37.485 122.196 123.146 1.00 0.07 P
ATOM 3 OP1 G A1960 -36.569 122.994 124.006 1.00 0.07 O
ATOM 4 OP2 G A1960 -38.894 122.688 122.942 1.00 0.07 O
ATOM 5 O5' G A1960 -36.803 121.901 121.757 1.00 0.07 O
ATOM 6 C5' G A1960 -35.624 121.147 121.718 1.00 0.07 C
ATOM 7 C4' G A1960 -35.225 120.851 120.316 1.00 0.07 C
ATOM 8 O4' G A1960 -35.956 119.704 119.835 1.00 0.07 O
ATOM 9 C3' G A1960 -35.536 121.913 119.295 1.00 0.07 C
ATOM 10 O3' G A1960 -34.617 122.983 119.333 1.00 0.07 O
ATOM 11 C2' G A1960 -35.443 121.098 118.032 1.00 0.07 C
ATOM 12 O2' G A1960 -34.089 120.760 117.773 1.00 0.07 O
ATOM 13 C1' G A1960 -36.159 119.832 118.461 1.00 0.07 C
ATOM 14 N9 G A1960 -37.589 119.912 118.225 1.00 0.01 N
ATOM 15 C8 G A1960 -38.520 120.396 119.089 1.00 0.01 C
ATOM 16 N7 G A1960 -39.730 120.361 118.613 1.00 0.01 N
ATOM 17 C5 G A1960 -39.550 119.801 117.371 1.00 0.01 C
ATOM 18 C6 G A1960 -40.502 119.505 116.396 1.00 0.01 C
ATOM 19 O6 G A1960 -41.709 119.695 116.469 1.00 0.01 O
ATOM 20 N1 G A1960 -39.934 118.958 115.271 1.00 0.01 N
ATOM 21 C2 G A1960 -38.610 118.728 115.112 1.00 0.01 C
ATOM 22 N2 G A1960 -38.298 118.192 113.941 1.00 0.01 N
ATOM 23 N3 G A1960 -37.684 118.981 116.009 1.00 0.01 N
ATOM 24 C4 G A1960 -38.238 119.512 117.111 1.00 0.01 C
ATOM 25 P A A1961 -35.078 124.482 119.003 1.00 0.01 P
ATOM 26 OP1 A A1961 -34.149 125.381 119.737 1.00 0.01 O
ATOM 27 OP2 A A1961 -36.533 124.553 119.279 1.00 0.01 O
ATOM 28 O5' A A1961 -34.825 124.624 117.441 1.00 0.01 O
TER
ATOM 1 O3' G B1922 -41.349 120.148 111.661 1.00 15.78 O
ATOM 2 P U B1923 -41.710 118.593 111.605 1.00 20.12 P
ATOM 3 OP1 U B1923 -42.990 118.465 110.881 1.00 20.12 O
ATOM 4 OP2 U B1923 -41.632 118.084 112.977 1.00 20.12 O
ATOM 5 O5' U B1923 -40.526 117.988 110.724 1.00 20.12 O
ATOM 6 C5' U B1923 -40.642 117.903 109.314 1.00 20.12 C
ATOM 7 C4' U B1923 -39.405 118.415 108.615 1.00 20.12 C
ATOM 8 O4' U B1923 -39.127 119.776 109.011 1.00 20.12 O
ATOM 9 C3' U B1923 -38.103 117.689 108.911 1.00 20.12 C
ATOM 10 O3' U B1923 -37.987 116.478 108.217 1.00 20.12 O
ATOM 11 C2' U B1923 -37.068 118.703 108.485 1.00 20.12 C
ATOM 12 O2' U B1923 -36.926 118.705 107.071 1.00 20.12 O
ATOM 13 C1' U B1923 -37.734 120.011 108.902 1.00 20.12 C
ATOM 14 N1 U B1923 -37.208 120.525 110.197 1.00 20.00 N
ATOM 15 C2 U B1923 -35.807 120.615 110.367 1.00 20.00 C
ATOM 16 O2 U B1923 -34.940 120.268 109.566 1.00 20.00 O
ATOM 17 N3 U B1923 -35.429 121.128 111.575 1.00 20.00 N
ATOM 18 C4 U B1923 -36.252 121.561 112.583 1.00 20.00 C
ATOM 19 O4 U B1923 -35.739 121.996 113.605 1.00 20.00 O
ATOM 20 C5 U B1923 -37.654 121.441 112.336 1.00 20.00 C
ATOM 21 C6 U B1923 -38.081 120.941 111.179 1.00 20.00 C
ATOM 22 P A B1924 -38.250 115.108 108.977 1.00 7.25 P
ATOM 23 OP1 A B1924 -38.951 114.211 108.032 1.00 7.25 O
ATOM 24 OP2 A B1924 -38.911 115.441 110.265 1.00 7.25 O
ATOM 25 O5' A B1924 -36.788 114.587 109.221 1.00 7.25 O
TER
ATOM 2 P G A1960 -37.485 122.196 123.146 1.00 0.07 P
ATOM 3 OP1 G A1960 -36.569 122.994 124.006 1.00 0.07 O
ATOM 4 OP2 G A1960 -38.894 122.688 122.942 1.00 0.07 O
ATOM 5 O5' G A1960 -36.803 121.901 121.757 1.00 0.07 O
ATOM 6 C5' G A1960 -35.624 121.147 121.718 1.00 0.07 C
ATOM 7 C4' G A1960 -35.225 120.851 120.316 1.00 0.07 C
ATOM 8 O4' G A1960 -35.956 119.704 119.835 1.00 0.07 O
ATOM 9 C3' G A1960 -35.536 121.913 119.295 1.00 0.07 C
ATOM 10 O3' G A1960 -34.617 122.983 119.333 1.00 0.07 O
ATOM 11 C2' G A1960 -35.443 121.098 118.032 1.00 0.07 C
ATOM 12 O2' G A1960 -34.089 120.760 117.773 1.00 0.07 O
ATOM 13 C1' G A1960 -36.159 119.832 118.461 1.00 0.07 C
ATOM 14 N9 G A1960 -37.589 119.912 118.225 1.00 0.01 N
ATOM 15 C8 G A1960 -38.520 120.396 119.089 1.00 0.01 C
ATOM 16 N7 G A1960 -39.730 120.361 118.613 1.00 0.01 N
ATOM 17 C5 G A1960 -39.550 119.801 117.371 1.00 0.01 C
ATOM 18 C6 G A1960 -40.502 119.505 116.396 1.00 0.01 C
ATOM 19 O6 G A1960 -41.709 119.695 116.469 1.00 0.01 O
ATOM 20 N1 G A1960 -39.934 118.958 115.271 1.00 0.01 N
ATOM 21 C2 G A1960 -38.610 118.728 115.112 1.00 0.01 C
ATOM 22 N2 G A1960 -38.298 118.192 113.941 1.00 0.01 N
ATOM 23 N3 G A1960 -37.684 118.981 116.009 1.00 0.01 N
ATOM 24 C4 G A1960 -38.238 119.512 117.111 1.00 0.01 C
ATOM 25 P A A1961 -35.078 124.482 119.003 1.00 0.01 P
ATOM 26 OP1 A A1961 -34.149 125.381 119.737 1.00 0.01 O
ATOM 27 OP2 A A1961 -36.533 124.553 119.279 1.00 0.01 O
ATOM 28 O5' A A1961 -34.825 124.624 117.441 1.00 0.01 O
TER
ATOM 1 O3' G B1922 -41.349 120.148 111.661 1.00 15.78 O
ATOM 2 P U B1923 -41.710 118.593 111.605 1.00 20.12 P
ATOM 3 OP1 U B1923 -42.990 118.465 110.881 1.00 20.12 O
ATOM 4 OP2 U B1923 -41.632 118.084 112.977 1.00 20.12 O
ATOM 5 O5' U B1923 -40.526 117.988 110.724 1.00 20.12 O
ATOM 6 C5' U B1923 -40.642 117.903 109.314 1.00 20.12 C
ATOM 7 C4' U B1923 -39.405 118.415 108.615 1.00 20.12 C
ATOM 8 O4' U B1923 -39.127 119.776 109.011 1.00 20.12 O
ATOM 9 C3' U B1923 -38.103 117.689 108.911 1.00 20.12 C
ATOM 10 O3' U B1923 -37.987 116.478 108.217 1.00 20.12 O
ATOM 11 C2' U B1923 -37.068 118.703 108.485 1.00 20.12 C
ATOM 12 O2' U B1923 -36.926 118.705 107.071 1.00 20.12 O
ATOM 13 C1' U B1923 -37.734 120.011 108.902 1.00 20.12 C
ATOM 14 N1 U B1923 -37.208 120.525 110.197 1.00 20.00 N
ATOM 15 C2 U B1923 -35.807 120.615 110.367 1.00 20.00 C
ATOM 16 O2 U B1923 -34.940 120.268 109.566 1.00 20.00 O
ATOM 17 N3 U B1923 -35.429 121.128 111.575 1.00 20.00 N
ATOM 18 C4 U B1923 -36.252 121.561 112.583 1.00 20.00 C
ATOM 19 O4 U B1923 -35.739 121.996 113.605 1.00 20.00 O
ATOM 20 C5 U B1923 -37.654 121.441 112.336 1.00 20.00 C
ATOM 21 C6 U B1923 -38.081 120.941 111.179 1.00 20.00 C
ATOM 22 P A B1924 -38.250 115.108 108.977 1.00 7.25 P
ATOM 23 OP1 A B1924 -38.951 114.211 108.032 1.00 7.25 O
ATOM 24 OP2 A B1924 -38.911 115.441 110.265 1.00 7.25 O
ATOM 25 O5' A B1924 -36.788 114.587 109.221 1.00 7.25 O
TER
Atoms:
OP1: (-36.569,122.994,124.006)
OP2: (-38.894,122.688,122.942)
C3': (-35.536,121.913,119.295)
C1': (-36.159,119.832,118.461)
C5': (-35.624,121.147,121.718)
O6: (-41.709,119.695,116.469)
O4': (-35.956,119.704,119.835)
C8: (-38.520,120.396,119.089)
C2: (-38.610,118.728,115.112)
C6: (-40.502,119.505,116.396)
C5: (-39.550,119.801,117.371)
C4: (-38.238,119.512,117.111)
P: (-37.485,122.196,123.146)
C4': (-35.225,120.851,120.316)
C2': (-35.443,121.098,118.032)
O2': (-34.089,120.760,117.773)
N1: (-39.934,118.958,115.271)
N2: (-38.298,118.192,113.941)
N3: (-37.684,118.981,116.009)
N7: (-39.730,120.361,118.613)
N9: (-37.589,119.912,118.225)
O5': (-36.803,121.901,121.757)
O3': (-34.617,122.983,119.333)
OP2: (-38.894,122.688,122.942)
C3': (-35.536,121.913,119.295)
C1': (-36.159,119.832,118.461)
C5': (-35.624,121.147,121.718)
O6: (-41.709,119.695,116.469)
O4': (-35.956,119.704,119.835)
C8: (-38.520,120.396,119.089)
C2: (-38.610,118.728,115.112)
C6: (-40.502,119.505,116.396)
C5: (-39.550,119.801,117.371)
C4: (-38.238,119.512,117.111)
P: (-37.485,122.196,123.146)
C4': (-35.225,120.851,120.316)
C2': (-35.443,121.098,118.032)
O2': (-34.089,120.760,117.773)
N1: (-39.934,118.958,115.271)
N2: (-38.298,118.192,113.941)
N3: (-37.684,118.981,116.009)
N7: (-39.730,120.361,118.613)
N9: (-37.589,119.912,118.225)
O5': (-36.803,121.901,121.757)
O3': (-34.617,122.983,119.333)
C4: (-36.252,121.561,112.583)
N3: (-35.429,121.128,111.575)
OP1: (-42.990,118.465,110.881)
OP2: (-41.632,118.084,112.977)
C2: (-35.807,120.615,110.367)
C1': (-37.734,120.011,108.902)
C3': (-38.103,117.689,108.911)
O5': (-40.526,117.988,110.724)
O4': (-39.127,119.776,109.011)
C5': (-40.642,117.903,109.314)
P: (-41.710,118.593,111.605)
C4': (-39.405,118.415,108.615)
C2': (-37.068,118.703,108.485)
O2': (-36.926,118.705,107.071)
N1: (-37.208,120.525,110.197)
O4: (-35.739,121.996,113.605)
O2: (-34.940,120.268,109.566)
C6: (-38.081,120.941,111.179)
C5: (-37.654,121.441,112.336)
O3': (-37.987,116.478,108.217)
N3: (-35.429,121.128,111.575)
OP1: (-42.990,118.465,110.881)
OP2: (-41.632,118.084,112.977)
C2: (-35.807,120.615,110.367)
C1': (-37.734,120.011,108.902)
C3': (-38.103,117.689,108.911)
O5': (-40.526,117.988,110.724)
O4': (-39.127,119.776,109.011)
C5': (-40.642,117.903,109.314)
P: (-41.710,118.593,111.605)
C4': (-39.405,118.415,108.615)
C2': (-37.068,118.703,108.485)
O2': (-36.926,118.705,107.071)
N1: (-37.208,120.525,110.197)
O4: (-35.739,121.996,113.605)
O2: (-34.940,120.268,109.566)
C6: (-38.081,120.941,111.179)
C5: (-37.654,121.441,112.336)
O3': (-37.987,116.478,108.217)
Image (generated by PyMOL):