ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A878:A863

Extra

PDB:
ATOM 1 O3' U A 877 -10.462 92.535 94.849 1.00 22.91 O
ATOM 2 P G A 878 -11.680 91.809 94.112 1.00 20.09 P
ATOM 3 OP1 G A 878 -11.081 90.567 93.584 1.00 12.37 O
ATOM 4 OP2 G A 878 -12.373 92.749 93.189 1.00 11.70 O
ATOM 5 O5' G A 878 -12.689 91.464 95.289 1.00 4.01 O
ATOM 6 C5' G A 878 -12.365 90.468 96.254 1.00 4.01 C
ATOM 7 C4' G A 878 -13.494 90.327 97.245 1.00 4.01 C
ATOM 8 O4' G A 878 -13.574 91.523 98.058 1.00 4.01 O
ATOM 9 C3' G A 878 -14.889 90.181 96.655 1.00 4.01 C
ATOM 10 O3' G A 878 -15.196 88.847 96.296 1.00 4.46 O
ATOM 11 C2' G A 878 -15.783 90.682 97.782 1.00 4.01 C
ATOM 12 O2' G A 878 -15.992 89.709 98.781 1.00 4.67 O
ATOM 13 C1' G A 878 -14.937 91.811 98.360 1.00 4.01 C
ATOM 14 N9 G A 878 -15.292 93.072 97.714 1.00 19.55 N
ATOM 15 C8 G A 878 -14.809 93.543 96.513 1.00 19.55 C
ATOM 16 N7 G A 878 -15.346 94.675 96.157 1.00 19.55 N
ATOM 17 C5 G A 878 -16.225 94.974 97.186 1.00 19.94 C
ATOM 18 C6 G A 878 -17.089 96.052 97.333 1.00 20.28 C
ATOM 19 O6 G A 878 -17.265 96.993 96.563 1.00 23.42 O
ATOM 20 N1 G A 878 -17.811 95.974 98.510 1.00 19.55 N
ATOM 21 C2 G A 878 -17.714 94.968 99.420 1.00 19.55 C
ATOM 22 N2 G A 878 -18.518 95.067 100.488 1.00 21.61 N
ATOM 23 N3 G A 878 -16.901 93.940 99.294 1.00 19.55 N
ATOM 24 C4 G A 878 -16.194 94.005 98.159 1.00 19.57 C
ATOM 25 P A A 879 -16.555 88.537 95.493 1.00 41.31 P
ATOM 26 OP1 A A 879 -16.509 87.105 95.099 1.00 23.39 O
ATOM 27 OP2 A A 879 -16.774 89.586 94.454 1.00 18.90 O
ATOM 28 O5' A A 879 -17.672 88.689 96.607 1.00 24.10 O
TER

ATOM 1 O3' G B 862 -21.739 97.950 98.037 1.00 31.50 O
ATOM 2 P U B 863 -20.899 98.770 99.142 1.00 43.34 P
ATOM 3 OP1 U B 863 -21.207 100.205 98.950 1.00 15.31 O
ATOM 4 OP2 U B 863 -19.478 98.329 99.208 1.00 15.65 O
ATOM 5 O5' U B 863 -21.580 98.314 100.498 1.00 38.15 O
ATOM 6 C5' U B 863 -22.978 98.527 100.713 1.00 36.90 C
ATOM 7 C4' U B 863 -23.564 97.367 101.474 1.00 36.46 C
ATOM 8 O4' U B 863 -23.902 96.283 100.574 1.00 36.76 O
ATOM 9 C3' U B 863 -22.640 96.745 102.501 1.00 36.58 C
ATOM 10 O3' U B 863 -22.648 97.503 103.697 1.00 37.34 O
ATOM 11 C2' U B 863 -23.222 95.346 102.653 1.00 37.04 C
ATOM 12 O2' U B 863 -24.348 95.352 103.504 1.00 36.83 O
ATOM 13 C1' U B 863 -23.691 95.042 101.225 1.00 36.36 C
ATOM 14 N1 U B 863 -22.746 94.242 100.423 1.00 32.24 N
ATOM 15 C2 U B 863 -22.576 92.919 100.765 1.00 31.34 C
ATOM 16 O2 U B 863 -23.181 92.388 101.669 1.00 31.99 O
ATOM 17 N3 U B 863 -21.675 92.233 100.009 1.00 30.94 N
ATOM 18 C4 U B 863 -20.947 92.712 98.965 1.00 30.35 C
ATOM 19 O4 U B 863 -20.137 91.970 98.409 1.00 30.49 O
ATOM 20 C5 U B 863 -21.183 94.084 98.652 1.00 30.29 C
ATOM 21 C6 U B 863 -22.051 94.783 99.373 1.00 30.80 C
ATOM 22 P A B 864 -21.349 97.511 104.641 1.00 35.30 P
ATOM 23 OP1 A B 864 -21.728 98.407 105.762 1.00 19.20 O
ATOM 24 OP2 A B 864 -20.101 97.775 103.872 1.00 19.99 O
ATOM 25 O5' A B 864 -21.287 96.015 105.172 1.00 38.63 O
TER

Atoms:
OP1: (-11.081,90.567,93.584)
OP2: (-12.373,92.749,93.189)
C3': (-14.889,90.181,96.655)
C1': (-14.937,91.811,98.360)
C5': (-12.365,90.468,96.254)
O6: (-17.265,96.993,96.563)
O4': (-13.574,91.523,98.058)
C8: (-14.809,93.543,96.513)
C2: (-17.714,94.968,99.420)
C6: (-17.089,96.052,97.333)
C5: (-16.225,94.974,97.186)
C4: (-16.194,94.005,98.159)
P: (-11.680,91.809,94.112)
C4': (-13.494,90.327,97.245)
C2': (-15.783,90.682,97.782)
O2': (-15.992,89.709,98.781)
N1: (-17.811,95.974,98.510)
N2: (-18.518,95.067,100.488)
N3: (-16.901,93.940,99.294)
N7: (-15.346,94.675,96.157)
N9: (-15.292,93.072,97.714)
O5': (-12.689,91.464,95.289)
O3': (-15.196,88.847,96.296)
C4: (-20.947,92.712,98.965)
N3: (-21.675,92.233,100.009)
OP1: (-21.207,100.205,98.950)
OP2: (-19.478,98.329,99.208)
C2: (-22.576,92.919,100.765)
C1': (-23.691,95.042,101.225)
C3': (-22.640,96.745,102.501)
O5': (-21.580,98.314,100.498)
O4': (-23.902,96.283,100.574)
C5': (-22.978,98.527,100.713)
P: (-20.899,98.770,99.142)
C4': (-23.564,97.367,101.474)
C2': (-23.222,95.346,102.653)
O2': (-24.348,95.352,103.504)
N1: (-22.746,94.242,100.423)
O4: (-20.137,91.970,98.409)
O2: (-23.181,92.388,101.669)
C6: (-22.051,94.783,99.373)
C5: (-21.183,94.084,98.652)
O3': (-22.648,97.503,103.697)
Image (generated by PyMOL):
PyMOL image
show in jmol