ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHK:A415:A388

Extra

PDB:
ATOM 1 O3' G A 414 187.809 -34.388-186.133 1.00 59.44 O
ATOM 2 P G A 415 188.862 -33.185-186.262 1.00 60.00 P
ATOM 3 OP1 G A 415 188.492 -32.411-187.478 1.00 63.67 O
ATOM 4 OP2 G A 415 190.220 -33.782-186.186 1.00 64.04 O
ATOM 5 O5' G A 415 188.575 -32.315-184.959 1.00 48.56 O
ATOM 6 C5' G A 415 187.787 -31.142-185.042 1.00 48.57 C
ATOM 7 C4' G A 415 187.661 -30.467-183.707 1.00 52.16 C
ATOM 8 O4' G A 415 187.462 -31.471-182.682 1.00 57.22 O
ATOM 9 C3' G A 415 188.874 -29.672-183.234 1.00 54.83 C
ATOM 10 O3' G A 415 188.919 -28.361-183.777 1.00 59.45 O
ATOM 11 C2' G A 415 188.707 -29.701-181.725 1.00 54.39 C
ATOM 12 O2' G A 415 187.700 -28.784-181.318 1.00 44.94 O
ATOM 13 C1' G A 415 188.175 -31.123-181.520 1.00 55.02 C
ATOM 14 N9 G A 415 189.264 -32.103-181.345 1.00 50.79 N
ATOM 15 C8 G A 415 189.801 -32.920-182.312 1.00 54.45 C
ATOM 16 N7 G A 415 190.767 -33.675-181.868 1.00 57.92 N
ATOM 17 C5 G A 415 190.868 -33.323-180.528 1.00 57.51 C
ATOM 18 C6 G A 415 191.749 -33.800-179.528 1.00 60.96 C
ATOM 19 O6 G A 415 192.637 -34.660-179.652 1.00 58.11 O
ATOM 20 N1 G A 415 191.497 -33.156-178.310 1.00 58.98 N
ATOM 21 C2 G A 415 190.534 -32.187-178.101 1.00 57.93 C
ATOM 22 N2 G A 415 190.426 -31.676-176.869 1.00 59.08 N
ATOM 23 N3 G A 415 189.718 -31.741-179.029 1.00 52.93 N
ATOM 24 C4 G A 415 189.943 -32.355-180.196 1.00 49.80 C
ATOM 25 P A A 416 190.248 -27.473-183.637 1.00 65.01 P
ATOM 26 OP1 A A 416 190.203 -26.448-184.702 1.00 95.26 O
ATOM 27 OP2 A A 416 191.407 -28.411-183.596 1.00 84.50 O
ATOM 28 O5' A A 416 190.052 -26.788-182.219 1.00 61.36 O
TER

ATOM 1 O3' G B 387 194.990 -32.850-175.561 1.00 56.53 O
ATOM 2 P U B 388 193.817 -33.866-175.073 1.00 55.35 P
ATOM 3 OP1 U B 388 194.463 -35.122-174.602 1.00 46.66 O
ATOM 4 OP2 U B 388 192.830 -33.950-176.168 1.00 53.05 O
ATOM 5 O5' U B 388 193.184 -33.083-173.836 1.00 40.90 O
ATOM 6 C5' U B 388 193.993 -32.670-172.755 1.00 38.16 C
ATOM 7 C4' U B 388 193.577 -31.320-172.257 1.00 42.17 C
ATOM 8 O4' U B 388 194.115 -30.290-173.111 1.00 47.01 O
ATOM 9 C3' U B 388 192.092 -31.056-172.259 1.00 50.05 C
ATOM 10 O3' U B 388 191.449 -31.630-171.144 1.00 59.01 O
ATOM 11 C2' U B 388 192.020 -29.536-172.290 1.00 52.23 C
ATOM 12 O2' U B 388 192.229 -28.992-170.991 1.00 54.97 O
ATOM 13 C1' U B 388 193.232 -29.198-173.158 1.00 50.44 C
ATOM 14 N1 U B 388 192.869 -28.980-174.551 1.00 48.14 N
ATOM 15 C2 U B 388 192.150 -27.862-174.869 1.00 49.22 C
ATOM 16 O2 U B 388 191.776 -27.060-174.039 1.00 56.29 O
ATOM 17 N3 U B 388 191.866 -27.735-176.194 1.00 51.98 N
ATOM 18 C4 U B 388 192.238 -28.591-177.211 1.00 57.38 C
ATOM 19 O4 U B 388 191.909 -28.346-178.383 1.00 58.66 O
ATOM 20 C5 U B 388 193.003 -29.724-176.778 1.00 57.21 C
ATOM 21 C6 U B 388 193.291 -29.878-175.486 1.00 51.75 C
ATOM 22 P A B 389 190.025 -32.340-171.324 1.00 64.52 P
ATOM 23 OP1 A B 389 189.853 -33.280-170.175 1.00 67.69 O
ATOM 24 OP2 A B 389 189.984 -32.877-172.711 1.00 51.05 O
ATOM 25 O5' A B 389 189.020 -31.121-171.171 1.00 52.57 O
TER

Atoms:
OP1: (188.492,-32.411,-187.478)
OP2: (190.220,-33.782,-186.186)
C3': (188.874,-29.672,-183.234)
C1': (188.175,-31.123,-181.520)
C5': (187.787,-31.142,-185.042)
O6: (192.637,-34.660,-179.652)
O4': (187.462,-31.471,-182.682)
C8: (189.801,-32.920,-182.312)
C2: (190.534,-32.187,-178.101)
C6: (191.749,-33.800,-179.528)
C5: (190.868,-33.323,-180.528)
C4: (189.943,-32.355,-180.196)
P: (188.862,-33.185,-186.262)
C4': (187.661,-30.467,-183.707)
C2': (188.707,-29.701,-181.725)
O2': (187.700,-28.784,-181.318)
N1: (191.497,-33.156,-178.310)
N2: (190.426,-31.676,-176.869)
N3: (189.718,-31.741,-179.029)
N7: (190.767,-33.675,-181.868)
N9: (189.264,-32.103,-181.345)
O5': (188.575,-32.315,-184.959)
O3': (188.919,-28.361,-183.777)
C4: (192.238,-28.591,-177.211)
N3: (191.866,-27.735,-176.194)
OP1: (194.463,-35.122,-174.602)
OP2: (192.830,-33.950,-176.168)
C2: (192.150,-27.862,-174.869)
C1': (193.232,-29.198,-173.158)
C3': (192.092,-31.056,-172.259)
O5': (193.184,-33.083,-173.836)
O4': (194.115,-30.290,-173.111)
C5': (193.993,-32.670,-172.755)
P: (193.817,-33.866,-175.073)
C4': (193.577,-31.320,-172.257)
C2': (192.020,-29.536,-172.290)
O2': (192.229,-28.992,-170.991)
N1: (192.869,-28.980,-174.551)
O4: (191.909,-28.346,-178.383)
O2: (191.776,-27.060,-174.039)
C6: (193.291,-29.878,-175.486)
C5: (193.003,-29.724,-176.778)
O3': (191.449,-31.630,-171.144)
Image (generated by PyMOL):
PyMOL image
show in jmol