ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1650:A2687

Extra

PDB:
ATOM 1 O3' C A1649 20.276 -35.582 30.387 1.00 57.37 O
ATOM 2 P U A1650 19.152 -34.475 30.242 1.00 54.82 P
ATOM 3 OP1 U A1650 18.034 -35.092 29.480 1.00 75.84 O
ATOM 4 OP2 U A1650 19.808 -33.241 29.703 1.00 59.74 O
ATOM 5 O5' U A1650 18.728 -34.247 31.751 1.00 53.46 O
ATOM 6 C5' U A1650 18.321 -35.335 32.558 1.00 47.38 C
ATOM 7 C4' U A1650 17.892 -34.868 33.923 1.00 55.85 C
ATOM 8 O4' U A1650 19.061 -34.518 34.700 1.00 47.99 O
ATOM 9 C3' U A1650 17.022 -33.612 33.965 1.00 62.45 C
ATOM 10 O3' U A1650 15.640 -33.881 33.751 1.00 63.23 O
ATOM 11 C2' U A1650 17.321 -33.047 35.345 1.00 56.92 C
ATOM 12 O2' U A1650 16.599 -33.762 36.341 1.00 52.54 O
ATOM 13 C1' U A1650 18.797 -33.389 35.496 1.00 53.41 C
ATOM 14 N1 U A1650 19.683 -32.301 35.051 1.00 58.24 N
ATOM 15 C2 U A1650 20.048 -31.382 35.994 1.00 59.55 C
ATOM 16 O2 U A1650 19.616 -31.432 37.118 1.00 68.08 O
ATOM 17 N3 U A1650 20.905 -30.402 35.580 1.00 58.99 N
ATOM 18 C4 U A1650 21.447 -30.261 34.333 1.00 54.71 C
ATOM 19 O4 U A1650 22.207 -29.321 34.134 1.00 56.49 O
ATOM 20 C5 U A1650 21.046 -31.265 33.397 1.00 57.78 C
ATOM 21 C6 U A1650 20.201 -32.236 33.778 1.00 59.79 C
ATOM 22 P C A1651 14.688 -32.781 33.065 1.00 61.97 P
ATOM 23 OP1 C A1651 13.379 -33.437 32.830 1.00 68.27 O
ATOM 24 OP2 C A1651 15.428 -32.222 31.901 1.00 67.27 O
ATOM 25 O5' C A1651 14.551 -31.664 34.193 1.00 51.51 O
TER

ATOM 1 O3' C B2686 9.524 -36.218 40.305 1.00 75.58 O
ATOM 2 P G B2687 10.439 -37.504 40.626 1.00 75.97 P
ATOM 3 OP1 G B2687 9.701 -38.711 40.138 1.00 61.64 O
ATOM 4 OP2 G B2687 10.819 -37.430 42.059 1.00 75.76 O
ATOM 5 O5' G B2687 11.715 -37.239 39.719 1.00 63.95 O
ATOM 6 C5' G B2687 11.627 -37.380 38.312 1.00 61.13 C
ATOM 7 C4' G B2687 12.918 -37.045 37.621 1.00 57.09 C
ATOM 8 O4' G B2687 13.024 -35.595 37.515 1.00 59.57 O
ATOM 9 C3' G B2687 14.193 -37.412 38.354 1.00 69.43 C
ATOM 10 O3' G B2687 14.559 -38.813 38.272 1.00 64.64 O
ATOM 11 C2' G B2687 15.176 -36.477 37.660 1.00 64.12 C
ATOM 12 O2' G B2687 15.414 -36.773 36.306 1.00 55.22 O
ATOM 13 C1' G B2687 14.378 -35.198 37.774 1.00 61.77 C
ATOM 14 N9 G B2687 14.457 -34.680 39.143 1.00 59.88 N
ATOM 15 C8 G B2687 13.802 -35.236 40.213 1.00 61.85 C
ATOM 16 N7 G B2687 14.121 -34.707 41.358 1.00 60.19 N
ATOM 17 C5 G B2687 15.091 -33.782 41.046 1.00 48.88 C
ATOM 18 C6 G B2687 15.782 -32.903 41.900 1.00 53.05 C
ATOM 19 O6 G B2687 15.665 -32.779 43.125 1.00 63.17 O
ATOM 20 N1 G B2687 16.681 -32.112 41.204 1.00 52.64 N
ATOM 21 C2 G B2687 16.881 -32.163 39.858 1.00 56.46 C
ATOM 22 N2 G B2687 17.797 -31.303 39.399 1.00 57.61 N
ATOM 23 N3 G B2687 16.228 -32.982 39.039 1.00 62.68 N
ATOM 24 C4 G B2687 15.342 -33.767 39.693 1.00 56.89 C
ATOM 25 P A B2688 14.995 -39.538 36.926 1.00 55.83 P
ATOM 26 OP1 A B2688 14.193 -38.941 35.821 1.00 73.62 O
ATOM 27 OP2 A B2688 14.879 -40.987 37.180 1.00 62.44 O
ATOM 28 O5' A B2688 16.527 -39.131 36.779 1.00 56.80 O
TER

Atoms:
C4: (21.447,-30.261,34.333)
N3: (20.905,-30.402,35.580)
OP1: (18.034,-35.092,29.480)
OP2: (19.808,-33.241,29.703)
C2: (20.048,-31.382,35.994)
C1': (18.797,-33.389,35.496)
C3': (17.022,-33.612,33.965)
O5': (18.728,-34.247,31.751)
O4': (19.061,-34.518,34.700)
C5': (18.321,-35.335,32.558)
P: (19.152,-34.475,30.242)
C4': (17.892,-34.868,33.923)
C2': (17.321,-33.047,35.345)
O2': (16.599,-33.762,36.341)
N1: (19.683,-32.301,35.051)
O4: (22.207,-29.321,34.134)
O2: (19.616,-31.432,37.118)
C6: (20.201,-32.236,33.778)
C5: (21.046,-31.265,33.397)
O3': (15.640,-33.881,33.751)
OP1: (9.701,-38.711,40.138)
OP2: (10.819,-37.430,42.059)
C3': (14.193,-37.412,38.354)
C1': (14.378,-35.198,37.774)
C5': (11.627,-37.380,38.312)
O6: (15.665,-32.779,43.125)
O4': (13.024,-35.595,37.515)
C8: (13.802,-35.236,40.213)
C2: (16.881,-32.163,39.858)
C6: (15.782,-32.903,41.900)
C5: (15.091,-33.782,41.046)
C4: (15.342,-33.767,39.693)
P: (10.439,-37.504,40.626)
C4': (12.918,-37.045,37.621)
C2': (15.176,-36.477,37.660)
O2': (15.414,-36.773,36.306)
N1: (16.681,-32.112,41.204)
N2: (17.797,-31.303,39.399)
N3: (16.228,-32.982,39.039)
N7: (14.121,-34.707,41.358)
N9: (14.457,-34.680,39.143)
O5': (11.715,-37.239,39.719)
O3': (14.559,-38.813,38.272)
Image (generated by PyMOL):
PyMOL image
show in jmol