Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:954:921
Extra
PDB:
ATOM 1 O3' A A 53 69.376 6.698 111.921 1.00 90.81 O
ATOM 2 P U A 54 67.832 6.550 112.348 1.00 90.90 P
ATOM 3 OP1 U A 54 67.836 6.160 113.781 1.00 89.66 O
ATOM 4 OP2 U A 54 67.124 5.694 111.347 1.00 90.30 O
ATOM 5 O5' U A 54 67.260 8.034 112.232 1.00 89.95 O
ATOM 6 C5' U A 54 68.046 9.148 112.697 1.00 88.59 C
ATOM 7 C4' U A 54 67.387 10.466 112.356 1.00 86.22 C
ATOM 8 O4' U A 54 67.322 10.646 110.912 1.00 85.55 O
ATOM 9 C3' U A 54 65.976 10.696 112.886 1.00 85.10 C
ATOM 10 O3' U A 54 65.883 12.033 113.345 1.00 83.45 O
ATOM 11 C2' U A 54 65.107 10.505 111.646 1.00 85.10 C
ATOM 12 O2' U A 54 63.902 11.246 111.701 1.00 86.10 O
ATOM 13 C1' U A 54 66.019 11.053 110.552 1.00 84.51 C
ATOM 14 N1 U A 54 65.729 10.580 109.186 1.00 83.17 N
ATOM 15 C2 U A 54 65.705 11.528 108.174 1.00 82.25 C
ATOM 16 O2 U A 54 65.928 12.713 108.368 1.00 82.86 O
ATOM 17 N3 U A 54 65.409 11.041 106.924 1.00 80.38 N
ATOM 18 C4 U A 54 65.141 9.734 106.584 1.00 80.57 C
ATOM 19 O4 U A 54 64.856 9.457 105.416 1.00 79.96 O
ATOM 20 C5 U A 54 65.195 8.810 107.679 1.00 81.15 C
ATOM 21 C6 U A 54 65.481 9.252 108.910 1.00 82.04 C
ATOM 22 P A A 55 66.279 12.374 114.862 1.00 82.59 P
ATOM 23 OP1 A A 55 66.037 11.156 115.676 1.00 83.00 O
ATOM 24 OP2 A A 55 65.611 13.647 115.239 1.00 83.81 O
ATOM 25 O5' A A 55 67.852 12.618 114.792 1.00 80.88 O
TER
ATOM 1 O3' G B 20 58.347 8.892 111.964 1.00 89.28 O
ATOM 2 P G B 21 59.467 7.749 112.103 1.00 90.27 P
ATOM 3 OP1 G B 21 59.187 6.990 113.347 1.00 89.80 O
ATOM 4 OP2 G B 21 60.807 8.371 111.913 1.00 89.77 O
ATOM 5 O5' G B 21 59.152 6.810 110.855 1.00 91.92 O
ATOM 6 C5' G B 21 60.211 6.243 110.076 1.00 95.69 C
ATOM 7 C4' G B 21 60.040 6.593 108.617 1.00 98.78 C
ATOM 8 O4' G B 21 59.749 8.003 108.465 1.00 97.35 O
ATOM 9 C3' G B 21 61.304 6.355 107.815 1.00102.57 C
ATOM 10 O3' G B 21 61.327 5.003 107.366 1.00111.34 O
ATOM 11 C2' G B 21 61.193 7.360 106.676 1.00100.01 C
ATOM 12 O2' G B 21 60.405 6.872 105.611 1.00100.38 O
ATOM 13 C1' G B 21 60.473 8.527 107.363 1.00 97.14 C
ATOM 14 N9 G B 21 61.312 9.618 107.859 1.00 94.83 N
ATOM 15 C8 G B 21 61.932 9.688 109.086 1.00 93.99 C
ATOM 16 N7 G B 21 62.548 10.822 109.287 1.00 92.25 N
ATOM 17 C5 G B 21 62.339 11.541 108.118 1.00 91.47 C
ATOM 18 C6 G B 21 62.754 12.848 107.759 1.00 89.95 C
ATOM 19 O6 G B 21 63.398 13.664 108.428 1.00 89.78 O
ATOM 20 N1 G B 21 62.337 13.181 106.478 1.00 88.92 N
ATOM 21 C2 G B 21 61.609 12.370 105.650 1.00 89.26 C
ATOM 22 N2 G B 21 61.312 12.875 104.451 1.00 88.87 N
ATOM 23 N3 G B 21 61.203 11.154 105.973 1.00 90.49 N
ATOM 24 C4 G B 21 61.599 10.805 107.215 1.00 92.49 C
ATOM 25 P U B 22 62.409 3.982 107.969 1.00117.26 P
ATOM 26 OP1 U B 22 62.511 4.240 109.432 1.00117.10 O
ATOM 27 OP2 U B 22 63.627 4.070 107.121 1.00117.50 O
ATOM 28 O5' U B 22 61.759 2.537 107.777 1.00120.68 O
TER
ATOM 2 P U A 54 67.832 6.550 112.348 1.00 90.90 P
ATOM 3 OP1 U A 54 67.836 6.160 113.781 1.00 89.66 O
ATOM 4 OP2 U A 54 67.124 5.694 111.347 1.00 90.30 O
ATOM 5 O5' U A 54 67.260 8.034 112.232 1.00 89.95 O
ATOM 6 C5' U A 54 68.046 9.148 112.697 1.00 88.59 C
ATOM 7 C4' U A 54 67.387 10.466 112.356 1.00 86.22 C
ATOM 8 O4' U A 54 67.322 10.646 110.912 1.00 85.55 O
ATOM 9 C3' U A 54 65.976 10.696 112.886 1.00 85.10 C
ATOM 10 O3' U A 54 65.883 12.033 113.345 1.00 83.45 O
ATOM 11 C2' U A 54 65.107 10.505 111.646 1.00 85.10 C
ATOM 12 O2' U A 54 63.902 11.246 111.701 1.00 86.10 O
ATOM 13 C1' U A 54 66.019 11.053 110.552 1.00 84.51 C
ATOM 14 N1 U A 54 65.729 10.580 109.186 1.00 83.17 N
ATOM 15 C2 U A 54 65.705 11.528 108.174 1.00 82.25 C
ATOM 16 O2 U A 54 65.928 12.713 108.368 1.00 82.86 O
ATOM 17 N3 U A 54 65.409 11.041 106.924 1.00 80.38 N
ATOM 18 C4 U A 54 65.141 9.734 106.584 1.00 80.57 C
ATOM 19 O4 U A 54 64.856 9.457 105.416 1.00 79.96 O
ATOM 20 C5 U A 54 65.195 8.810 107.679 1.00 81.15 C
ATOM 21 C6 U A 54 65.481 9.252 108.910 1.00 82.04 C
ATOM 22 P A A 55 66.279 12.374 114.862 1.00 82.59 P
ATOM 23 OP1 A A 55 66.037 11.156 115.676 1.00 83.00 O
ATOM 24 OP2 A A 55 65.611 13.647 115.239 1.00 83.81 O
ATOM 25 O5' A A 55 67.852 12.618 114.792 1.00 80.88 O
TER
ATOM 1 O3' G B 20 58.347 8.892 111.964 1.00 89.28 O
ATOM 2 P G B 21 59.467 7.749 112.103 1.00 90.27 P
ATOM 3 OP1 G B 21 59.187 6.990 113.347 1.00 89.80 O
ATOM 4 OP2 G B 21 60.807 8.371 111.913 1.00 89.77 O
ATOM 5 O5' G B 21 59.152 6.810 110.855 1.00 91.92 O
ATOM 6 C5' G B 21 60.211 6.243 110.076 1.00 95.69 C
ATOM 7 C4' G B 21 60.040 6.593 108.617 1.00 98.78 C
ATOM 8 O4' G B 21 59.749 8.003 108.465 1.00 97.35 O
ATOM 9 C3' G B 21 61.304 6.355 107.815 1.00102.57 C
ATOM 10 O3' G B 21 61.327 5.003 107.366 1.00111.34 O
ATOM 11 C2' G B 21 61.193 7.360 106.676 1.00100.01 C
ATOM 12 O2' G B 21 60.405 6.872 105.611 1.00100.38 O
ATOM 13 C1' G B 21 60.473 8.527 107.363 1.00 97.14 C
ATOM 14 N9 G B 21 61.312 9.618 107.859 1.00 94.83 N
ATOM 15 C8 G B 21 61.932 9.688 109.086 1.00 93.99 C
ATOM 16 N7 G B 21 62.548 10.822 109.287 1.00 92.25 N
ATOM 17 C5 G B 21 62.339 11.541 108.118 1.00 91.47 C
ATOM 18 C6 G B 21 62.754 12.848 107.759 1.00 89.95 C
ATOM 19 O6 G B 21 63.398 13.664 108.428 1.00 89.78 O
ATOM 20 N1 G B 21 62.337 13.181 106.478 1.00 88.92 N
ATOM 21 C2 G B 21 61.609 12.370 105.650 1.00 89.26 C
ATOM 22 N2 G B 21 61.312 12.875 104.451 1.00 88.87 N
ATOM 23 N3 G B 21 61.203 11.154 105.973 1.00 90.49 N
ATOM 24 C4 G B 21 61.599 10.805 107.215 1.00 92.49 C
ATOM 25 P U B 22 62.409 3.982 107.969 1.00117.26 P
ATOM 26 OP1 U B 22 62.511 4.240 109.432 1.00117.10 O
ATOM 27 OP2 U B 22 63.627 4.070 107.121 1.00117.50 O
ATOM 28 O5' U B 22 61.759 2.537 107.777 1.00120.68 O
TER
Atoms:
C4: (65.141,9.734,106.584)
N3: (65.409,11.041,106.924)
OP1: (67.836,6.160,113.781)
OP2: (67.124,5.694,111.347)
C2: (65.705,11.528,108.174)
C1': (66.019,11.053,110.552)
C3': (65.976,10.696,112.886)
O5': (67.260,8.034,112.232)
O4': (67.322,10.646,110.912)
C5': (68.046,9.148,112.697)
P: (67.832,6.550,112.348)
C4': (67.387,10.466,112.356)
C2': (65.107,10.505,111.646)
O2': (63.902,11.246,111.701)
N1: (65.729,10.580,109.186)
O4: (64.856,9.457,105.416)
O2: (65.928,12.713,108.368)
C6: (65.481,9.252,108.910)
C5: (65.195,8.810,107.679)
O3': (65.883,12.033,113.345)
N3: (65.409,11.041,106.924)
OP1: (67.836,6.160,113.781)
OP2: (67.124,5.694,111.347)
C2: (65.705,11.528,108.174)
C1': (66.019,11.053,110.552)
C3': (65.976,10.696,112.886)
O5': (67.260,8.034,112.232)
O4': (67.322,10.646,110.912)
C5': (68.046,9.148,112.697)
P: (67.832,6.550,112.348)
C4': (67.387,10.466,112.356)
C2': (65.107,10.505,111.646)
O2': (63.902,11.246,111.701)
N1: (65.729,10.580,109.186)
O4: (64.856,9.457,105.416)
O2: (65.928,12.713,108.368)
C6: (65.481,9.252,108.910)
C5: (65.195,8.810,107.679)
O3': (65.883,12.033,113.345)
OP1: (59.187,6.990,113.347)
OP2: (60.807,8.371,111.913)
C3': (61.304,6.355,107.815)
C1': (60.473,8.527,107.363)
C5': (60.211,6.243,110.076)
O6: (63.398,13.664,108.428)
O4': (59.749,8.003,108.465)
C8: (61.932,9.688,109.086)
C2: (61.609,12.370,105.650)
C6: (62.754,12.848,107.759)
C5: (62.339,11.541,108.118)
C4: (61.599,10.805,107.215)
P: (59.467,7.749,112.103)
C4': (60.040,6.593,108.617)
C2': (61.193,7.360,106.676)
O2': (60.405,6.872,105.611)
N1: (62.337,13.181,106.478)
N2: (61.312,12.875,104.451)
N3: (61.203,11.154,105.973)
N7: (62.548,10.822,109.287)
N9: (61.312,9.618,107.859)
O5': (59.152,6.810,110.855)
O3': (61.327,5.003,107.366)
OP2: (60.807,8.371,111.913)
C3': (61.304,6.355,107.815)
C1': (60.473,8.527,107.363)
C5': (60.211,6.243,110.076)
O6: (63.398,13.664,108.428)
O4': (59.749,8.003,108.465)
C8: (61.932,9.688,109.086)
C2: (61.609,12.370,105.650)
C6: (62.754,12.848,107.759)
C5: (62.339,11.541,108.118)
C4: (61.599,10.805,107.215)
P: (59.467,7.749,112.103)
C4': (60.040,6.593,108.617)
C2': (61.193,7.360,106.676)
O2': (60.405,6.872,105.611)
N1: (62.337,13.181,106.478)
N2: (61.312,12.875,104.451)
N3: (61.203,11.154,105.973)
N7: (62.548,10.822,109.287)
N9: (61.312,9.618,107.859)
O5': (59.152,6.810,110.855)
O3': (61.327,5.003,107.366)
Image (generated by PyMOL):