ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:0536:0592

Extra

PDB:
ATOM 1 O3' A A 535 5.625 138.163 92.278 1.00 53.04 O
ATOM 2 P U A 536 4.223 138.038 91.494 1.00 55.35 P
ATOM 3 OP1 U A 536 3.791 139.432 91.162 1.00 53.57 O
ATOM 4 OP2 U A 536 3.317 137.150 92.275 1.00 54.02 O
ATOM 5 O5' U A 536 4.592 137.296 90.132 1.00 52.85 O
ATOM 6 C5' U A 536 5.534 137.876 89.221 1.00 51.64 C
ATOM 7 C4' U A 536 5.677 137.018 87.991 1.00 54.44 C
ATOM 8 O4' U A 536 6.109 135.680 88.385 1.00 54.73 O
ATOM 9 C3' U A 536 4.422 136.828 87.134 1.00 54.88 C
ATOM 10 O3' U A 536 4.812 136.724 85.768 1.00 57.82 O
ATOM 11 C2' U A 536 3.916 135.464 87.593 1.00 53.66 C
ATOM 12 O2' U A 536 3.153 134.784 86.619 1.00 52.90 O
ATOM 13 C1' U A 536 5.232 134.725 87.825 1.00 52.60 C
ATOM 14 N1 U A 536 5.119 133.573 88.731 1.00 50.88 N
ATOM 15 C2 U A 536 5.474 132.339 88.228 1.00 50.79 C
ATOM 16 O2 U A 536 5.927 132.186 87.107 1.00 52.22 O
ATOM 17 N3 U A 536 5.281 131.285 89.084 1.00 50.38 N
ATOM 18 C4 U A 536 4.793 131.337 90.369 1.00 50.74 C
ATOM 19 O4 U A 536 4.661 130.291 91.007 1.00 50.15 O
ATOM 20 C5 U A 536 4.481 132.654 90.834 1.00 50.10 C
ATOM 21 C6 U A 536 4.653 133.702 90.022 1.00 50.70 C
ATOM 22 P A A 537 4.639 137.979 84.777 1.00 59.97 P
ATOM 23 OP1 A A 537 5.757 137.915 83.800 1.00 58.60 O
ATOM 24 OP2 A A 537 4.436 139.214 85.588 1.00 58.50 O
ATOM 25 O5' A A 537 3.295 137.669 83.978 1.00 59.95 O
TER

ATOM 1 O3' A B 591 -5.794 133.152 88.917 1.00 82.05 O
ATOM 2 P G B 592 -5.081 134.049 90.063 1.00 82.87 P
ATOM 3 OP1 G B 592 -5.974 134.175 91.249 1.00 82.82 O
ATOM 4 OP2 G B 592 -4.620 135.278 89.368 1.00 82.37 O
ATOM 5 O5' G B 592 -3.771 133.223 90.468 1.00 79.64 O
ATOM 6 C5' G B 592 -2.823 133.744 91.439 1.00 74.18 C
ATOM 7 C4' G B 592 -1.974 132.622 92.015 1.00 70.46 C
ATOM 8 O4' G B 592 -1.245 131.952 90.948 1.00 68.01 O
ATOM 9 C3' G B 592 -0.918 133.041 93.044 1.00 69.25 C
ATOM 10 O3' G B 592 -0.697 132.008 94.009 1.00 69.74 O
ATOM 11 C2' G B 592 0.351 133.130 92.200 1.00 67.22 C
ATOM 12 O2' G B 592 1.527 132.939 92.967 1.00 65.52 O
ATOM 13 C1' G B 592 0.141 131.958 91.243 1.00 64.76 C
ATOM 14 N9 G B 592 0.879 132.027 89.985 1.00 60.15 N
ATOM 15 C8 G B 592 1.120 133.140 89.215 1.00 58.05 C
ATOM 16 N7 G B 592 1.773 132.871 88.119 1.00 56.86 N
ATOM 17 C5 G B 592 1.986 131.500 88.172 1.00 55.80 C
ATOM 18 C6 G B 592 2.633 130.639 87.255 1.00 55.13 C
ATOM 19 O6 G B 592 3.166 130.924 86.176 1.00 58.03 O
ATOM 20 N1 G B 592 2.623 129.322 87.695 1.00 53.77 N
ATOM 21 C2 G B 592 2.066 128.886 88.869 1.00 54.28 C
ATOM 22 N2 G B 592 2.165 127.572 89.119 1.00 51.17 N
ATOM 23 N3 G B 592 1.456 129.680 89.734 1.00 55.57 N
ATOM 24 C4 G B 592 1.452 130.967 89.322 1.00 56.92 C
ATOM 25 P C B 593 -1.932 131.380 94.820 1.00 69.94 P
ATOM 26 OP1 C B 593 -3.065 132.350 94.771 1.00 69.71 O
ATOM 27 OP2 C B 593 -1.417 130.925 96.139 1.00 66.65 O
ATOM 28 O5' C B 593 -2.308 130.101 93.938 1.00 67.87 O
TER

Atoms:
C4: (4.793,131.337,90.369)
N3: (5.281,131.285,89.084)
OP1: (3.791,139.432,91.162)
OP2: (3.317,137.150,92.275)
C2: (5.474,132.339,88.228)
C1': (5.232,134.725,87.825)
C3': (4.422,136.828,87.134)
O5': (4.592,137.296,90.132)
O4': (6.109,135.680,88.385)
C5': (5.534,137.876,89.221)
P: (4.223,138.038,91.494)
C4': (5.677,137.018,87.991)
C2': (3.916,135.464,87.593)
O2': (3.153,134.784,86.619)
N1: (5.119,133.573,88.731)
O4: (4.661,130.291,91.007)
O2: (5.927,132.186,87.107)
C6: (4.653,133.702,90.022)
C5: (4.481,132.654,90.834)
O3': (4.812,136.724,85.768)
OP1: (-5.974,134.175,91.249)
OP2: (-4.620,135.278,89.368)
C3': (-0.918,133.041,93.044)
C1': (0.141,131.958,91.243)
C5': (-2.823,133.744,91.439)
O6: (3.166,130.924,86.176)
O4': (-1.245,131.952,90.948)
C8: (1.120,133.140,89.215)
C2: (2.066,128.886,88.869)
C6: (2.633,130.639,87.255)
C5: (1.986,131.500,88.172)
C4: (1.452,130.967,89.322)
P: (-5.081,134.049,90.063)
C4': (-1.974,132.622,92.015)
C2': (0.351,133.130,92.200)
O2': (1.527,132.939,92.967)
N1: (2.623,129.322,87.695)
N2: (2.165,127.572,89.119)
N3: (1.456,129.680,89.734)
N7: (1.773,132.871,88.119)
N9: (0.879,132.027,89.985)
O5': (-3.771,133.223,90.468)
O3': (-0.697,132.008,94.009)
Image (generated by PyMOL):
PyMOL image
show in jmol