ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A1659:A1660

Extra

PDB:
ATOM 1 O3' G A1658 11.269 -17.083 7.768 1.00 94.77 O
ATOM 2 P U A1659 9.770 -16.609 7.428 1.00 99.94 P
ATOM 3 OP1 U A1659 9.701 -16.406 5.962 1.00122.29 O
ATOM 4 OP2 U A1659 9.461 -15.470 8.317 1.00127.41 O
ATOM 5 O5' U A1659 8.889 -17.872 7.849 1.00 85.91 O
ATOM 6 C5' U A1659 9.179 -19.159 7.322 1.00 88.73 C
ATOM 7 C4' U A1659 8.212 -20.219 7.804 1.00 80.06 C
ATOM 8 O4' U A1659 8.462 -20.553 9.186 1.00 80.24 O
ATOM 9 C3' U A1659 6.739 -19.865 7.782 1.00 83.95 C
ATOM 10 O3' U A1659 6.187 -19.925 6.481 1.00 83.92 O
ATOM 11 C2' U A1659 6.146 -20.898 8.737 1.00 82.39 C
ATOM 12 O2' U A1659 5.945 -22.136 8.071 1.00 74.80 O
ATOM 13 C1' U A1659 7.281 -21.076 9.755 1.00 81.26 C
ATOM 14 N1 U A1659 7.007 -20.398 11.056 1.00 87.36 N
ATOM 15 C2 U A1659 6.392 -21.201 11.998 1.00 84.93 C
ATOM 16 O2 U A1659 6.081 -22.353 11.763 1.00 86.79 O
ATOM 17 N3 U A1659 6.130 -20.624 13.216 1.00 92.01 N
ATOM 18 C4 U A1659 6.414 -19.335 13.613 1.00 93.53 C
ATOM 19 O4 U A1659 6.103 -18.990 14.766 1.00 90.48 O
ATOM 20 C5 U A1659 7.067 -18.554 12.590 1.00 85.33 C
ATOM 21 C6 U A1659 7.338 -19.092 11.381 1.00 86.47 C
ATOM 22 P G A1660 5.247 -18.750 5.951 1.00127.43 P
ATOM 23 OP1 G A1660 5.481 -18.623 4.495 1.00105.49 O
ATOM 24 OP2 G A1660 5.484 -17.575 6.815 1.00103.63 O
ATOM 25 O5' G A1660 3.806 -19.333 6.221 1.00 76.46 O
TER

ATOM 1 O3' U B1659 6.187 -19.925 6.481 1.00 83.92 O
ATOM 2 P G B1660 5.247 -18.750 5.951 1.00127.43 P
ATOM 3 OP1 G B1660 5.481 -18.623 4.495 1.00105.49 O
ATOM 4 OP2 G B1660 5.484 -17.575 6.815 1.00103.63 O
ATOM 5 O5' G B1660 3.806 -19.333 6.221 1.00 76.46 O
ATOM 6 C5' G B1660 2.976 -18.752 7.200 1.00 88.63 C
ATOM 7 C4' G B1660 2.467 -19.776 8.168 1.00 86.27 C
ATOM 8 O4' G B1660 3.452 -19.998 9.204 1.00 83.87 O
ATOM 9 C3' G B1660 1.227 -19.376 8.937 1.00 89.26 C
ATOM 10 O3' G B1660 0.039 -19.507 8.178 1.00 95.27 O
ATOM 11 C2' G B1660 1.300 -20.262 10.169 1.00 89.23 C
ATOM 12 O2' G B1660 0.926 -21.593 9.854 1.00 92.13 O
ATOM 13 C1' G B1660 2.803 -20.244 10.435 1.00 86.45 C
ATOM 14 N9 G B1660 3.203 -19.200 11.416 1.00 83.84 N
ATOM 15 C8 G B1660 2.933 -19.274 12.770 1.00 82.14 C
ATOM 16 N7 G B1660 3.392 -18.276 13.475 1.00 74.22 N
ATOM 17 C5 G B1660 4.013 -17.482 12.530 1.00 81.08 C
ATOM 18 C6 G B1660 4.694 -16.258 12.734 1.00 87.35 C
ATOM 19 O6 G B1660 4.854 -15.661 13.808 1.00 81.43 O
ATOM 20 N1 G B1660 5.205 -15.742 11.539 1.00 88.82 N
ATOM 21 C2 G B1660 5.082 -16.330 10.303 1.00 82.99 C
ATOM 22 N2 G B1660 5.661 -15.628 9.305 1.00 73.94 N
ATOM 23 N3 G B1660 4.436 -17.487 10.100 1.00 75.08 N
ATOM 24 C4 G B1660 3.925 -18.016 11.249 1.00 78.96 C
ATOM 25 P A B1661 -0.503 -18.242 7.342 1.00114.35 P
ATOM 26 OP1 A B1661 -1.986 -18.227 7.484 1.00122.63 O
ATOM 27 OP2 A B1661 0.085 -18.324 5.977 1.00118.62 O
ATOM 28 O5' A B1661 0.147 -17.020 8.140 1.00109.89 O
TER

Atoms:
C4: (6.414,-19.335,13.613)
N3: (6.130,-20.624,13.216)
OP1: (9.701,-16.406,5.962)
OP2: (9.461,-15.470,8.317)
C2: (6.392,-21.201,11.998)
C1': (7.281,-21.076,9.755)
C3': (6.739,-19.865,7.782)
O5': (8.889,-17.872,7.849)
O4': (8.462,-20.553,9.186)
C5': (9.179,-19.159,7.322)
P: (9.770,-16.609,7.428)
C4': (8.212,-20.219,7.804)
C2': (6.146,-20.898,8.737)
O2': (5.945,-22.136,8.071)
N1: (7.007,-20.398,11.056)
O4: (6.103,-18.990,14.766)
O2: (6.081,-22.353,11.763)
C6: (7.338,-19.092,11.381)
C5: (7.067,-18.554,12.590)
O3': (6.187,-19.925,6.481)
OP1: (5.481,-18.623,4.495)
OP2: (5.484,-17.575,6.815)
C3': (1.227,-19.376,8.937)
C1': (2.803,-20.244,10.435)
C5': (2.976,-18.752,7.200)
O6: (4.854,-15.661,13.808)
O4': (3.452,-19.998,9.204)
C8: (2.933,-19.274,12.770)
C2: (5.082,-16.330,10.303)
C6: (4.694,-16.258,12.734)
C5: (4.013,-17.482,12.530)
C4: (3.925,-18.016,11.249)
P: (5.247,-18.750,5.951)
C4': (2.467,-19.776,8.168)
C2': (1.300,-20.262,10.169)
O2': (0.926,-21.593,9.854)
N1: (5.205,-15.742,11.539)
N2: (5.661,-15.628,9.305)
N3: (4.436,-17.487,10.100)
N7: (3.392,-18.276,13.475)
N9: (3.203,-19.200,11.416)
O5': (3.806,-19.333,6.221)
O3': (0.039,-19.507,8.178)
Image (generated by PyMOL):
PyMOL image
show in jmol