Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J03:A56:A53
Extra
PDB:
ATOM 1 O3' C A 55 -18.052 -80.017 39.470 1.00 39.40 O
ATOM 2 P U A 56 -18.970 -78.714 39.715 1.00 89.47 P
ATOM 3 OP1 U A 56 -19.130 -78.042 38.406 1.00 70.63 O
ATOM 4 OP2 U A 56 -18.417 -77.945 40.866 1.00 70.67 O
ATOM 5 O5' U A 56 -20.383 -79.316 40.145 1.00130.20 O
ATOM 6 C5' U A 56 -21.261 -79.898 39.164 1.00130.20 C
ATOM 7 C4' U A 56 -22.709 -79.648 39.527 1.00130.20 C
ATOM 8 O4' U A 56 -23.165 -80.632 40.494 1.00130.20 O
ATOM 9 C3' U A 56 -23.058 -78.265 40.086 1.00130.20 C
ATOM 10 O3' U A 56 -24.300 -77.824 39.545 1.00130.20 O
ATOM 11 C2' U A 56 -23.253 -78.542 41.578 1.00130.20 C
ATOM 12 O2' U A 56 -24.171 -77.663 42.205 1.00130.20 O
ATOM 13 C1' U A 56 -23.809 -79.968 41.559 1.00130.20 C
ATOM 14 N1 U A 56 -23.608 -80.732 42.802 1.00 43.59 N
ATOM 15 C2 U A 56 -24.728 -81.316 43.374 1.00 43.56 C
ATOM 16 O2 U A 56 -25.836 -81.261 42.867 1.00 43.59 O
ATOM 17 N3 U A 56 -24.504 -81.969 44.562 1.00 43.44 N
ATOM 18 C4 U A 56 -23.299 -82.109 45.222 1.00 43.37 C
ATOM 19 O4 U A 56 -23.270 -82.680 46.318 1.00 43.48 O
ATOM 20 C5 U A 56 -22.182 -81.503 44.557 1.00 43.21 C
ATOM 21 C6 U A 56 -22.369 -80.853 43.399 1.00 43.28 C
ATOM 22 P A A 57 -24.360 -76.541 38.564 1.00 46.17 P
ATOM 23 OP1 A A 57 -23.231 -76.641 37.595 1.00 60.92 O
ATOM 24 OP2 A A 57 -24.534 -75.298 39.369 1.00 60.87 O
ATOM 25 O5' A A 57 -25.704 -76.846 37.761 1.00 11.29 O
TER
ATOM 1 O3' U B 52 -19.354 -73.988 49.716 1.00 6.93 O
ATOM 2 P G B 53 -18.615 -74.856 48.579 1.00 23.87 P
ATOM 3 OP1 G B 53 -17.159 -74.861 48.948 1.00 10.84 O
ATOM 4 OP2 G B 53 -19.029 -74.432 47.212 1.00 10.84 O
ATOM 5 O5' G B 53 -19.253 -76.298 48.783 1.00 23.06 O
ATOM 6 C5' G B 53 -19.442 -76.846 50.104 1.00 23.06 C
ATOM 7 C4' G B 53 -19.562 -78.349 50.024 1.00 23.06 C
ATOM 8 O4' G B 53 -20.899 -78.720 49.588 1.00 23.06 O
ATOM 9 C3' G B 53 -18.581 -79.002 49.055 1.00 23.06 C
ATOM 10 O3' G B 53 -18.074 -80.214 49.597 1.00 23.06 O
ATOM 11 C2' G B 53 -19.442 -79.271 47.822 1.00 23.06 C
ATOM 12 O2' G B 53 -18.971 -80.358 47.047 1.00 23.06 O
ATOM 13 C1' G B 53 -20.808 -79.551 48.455 1.00 23.06 C
ATOM 14 N9 G B 53 -21.983 -79.318 47.617 1.00 8.63 N
ATOM 15 C8 G B 53 -22.050 -78.648 46.418 1.00 8.63 C
ATOM 16 N7 G B 53 -23.249 -78.652 45.897 1.00 8.63 N
ATOM 17 C5 G B 53 -24.022 -79.358 46.809 1.00 8.63 C
ATOM 18 C6 G B 53 -25.401 -79.706 46.779 1.00 8.63 C
ATOM 19 O6 G B 53 -26.248 -79.448 45.919 1.00 8.63 O
ATOM 20 N1 G B 53 -25.769 -80.429 47.900 1.00 8.63 N
ATOM 21 C2 G B 53 -24.932 -80.777 48.921 1.00 8.63 C
ATOM 22 N2 G B 53 -25.495 -81.464 49.923 1.00 8.63 N
ATOM 23 N3 G B 53 -23.646 -80.470 48.964 1.00 8.63 N
ATOM 24 C4 G B 53 -23.261 -79.766 47.881 1.00 8.63 C
ATOM 25 P G B 54 -16.491 -80.435 49.693 1.00 63.19 P
ATOM 26 OP1 G B 54 -16.288 -81.837 50.084 1.00 44.53 O
ATOM 27 OP2 G B 54 -15.908 -79.355 50.525 1.00 44.53 O
ATOM 28 O5' G B 54 -15.980 -80.274 48.196 1.00 37.38 O
TER
ATOM 2 P U A 56 -18.970 -78.714 39.715 1.00 89.47 P
ATOM 3 OP1 U A 56 -19.130 -78.042 38.406 1.00 70.63 O
ATOM 4 OP2 U A 56 -18.417 -77.945 40.866 1.00 70.67 O
ATOM 5 O5' U A 56 -20.383 -79.316 40.145 1.00130.20 O
ATOM 6 C5' U A 56 -21.261 -79.898 39.164 1.00130.20 C
ATOM 7 C4' U A 56 -22.709 -79.648 39.527 1.00130.20 C
ATOM 8 O4' U A 56 -23.165 -80.632 40.494 1.00130.20 O
ATOM 9 C3' U A 56 -23.058 -78.265 40.086 1.00130.20 C
ATOM 10 O3' U A 56 -24.300 -77.824 39.545 1.00130.20 O
ATOM 11 C2' U A 56 -23.253 -78.542 41.578 1.00130.20 C
ATOM 12 O2' U A 56 -24.171 -77.663 42.205 1.00130.20 O
ATOM 13 C1' U A 56 -23.809 -79.968 41.559 1.00130.20 C
ATOM 14 N1 U A 56 -23.608 -80.732 42.802 1.00 43.59 N
ATOM 15 C2 U A 56 -24.728 -81.316 43.374 1.00 43.56 C
ATOM 16 O2 U A 56 -25.836 -81.261 42.867 1.00 43.59 O
ATOM 17 N3 U A 56 -24.504 -81.969 44.562 1.00 43.44 N
ATOM 18 C4 U A 56 -23.299 -82.109 45.222 1.00 43.37 C
ATOM 19 O4 U A 56 -23.270 -82.680 46.318 1.00 43.48 O
ATOM 20 C5 U A 56 -22.182 -81.503 44.557 1.00 43.21 C
ATOM 21 C6 U A 56 -22.369 -80.853 43.399 1.00 43.28 C
ATOM 22 P A A 57 -24.360 -76.541 38.564 1.00 46.17 P
ATOM 23 OP1 A A 57 -23.231 -76.641 37.595 1.00 60.92 O
ATOM 24 OP2 A A 57 -24.534 -75.298 39.369 1.00 60.87 O
ATOM 25 O5' A A 57 -25.704 -76.846 37.761 1.00 11.29 O
TER
ATOM 1 O3' U B 52 -19.354 -73.988 49.716 1.00 6.93 O
ATOM 2 P G B 53 -18.615 -74.856 48.579 1.00 23.87 P
ATOM 3 OP1 G B 53 -17.159 -74.861 48.948 1.00 10.84 O
ATOM 4 OP2 G B 53 -19.029 -74.432 47.212 1.00 10.84 O
ATOM 5 O5' G B 53 -19.253 -76.298 48.783 1.00 23.06 O
ATOM 6 C5' G B 53 -19.442 -76.846 50.104 1.00 23.06 C
ATOM 7 C4' G B 53 -19.562 -78.349 50.024 1.00 23.06 C
ATOM 8 O4' G B 53 -20.899 -78.720 49.588 1.00 23.06 O
ATOM 9 C3' G B 53 -18.581 -79.002 49.055 1.00 23.06 C
ATOM 10 O3' G B 53 -18.074 -80.214 49.597 1.00 23.06 O
ATOM 11 C2' G B 53 -19.442 -79.271 47.822 1.00 23.06 C
ATOM 12 O2' G B 53 -18.971 -80.358 47.047 1.00 23.06 O
ATOM 13 C1' G B 53 -20.808 -79.551 48.455 1.00 23.06 C
ATOM 14 N9 G B 53 -21.983 -79.318 47.617 1.00 8.63 N
ATOM 15 C8 G B 53 -22.050 -78.648 46.418 1.00 8.63 C
ATOM 16 N7 G B 53 -23.249 -78.652 45.897 1.00 8.63 N
ATOM 17 C5 G B 53 -24.022 -79.358 46.809 1.00 8.63 C
ATOM 18 C6 G B 53 -25.401 -79.706 46.779 1.00 8.63 C
ATOM 19 O6 G B 53 -26.248 -79.448 45.919 1.00 8.63 O
ATOM 20 N1 G B 53 -25.769 -80.429 47.900 1.00 8.63 N
ATOM 21 C2 G B 53 -24.932 -80.777 48.921 1.00 8.63 C
ATOM 22 N2 G B 53 -25.495 -81.464 49.923 1.00 8.63 N
ATOM 23 N3 G B 53 -23.646 -80.470 48.964 1.00 8.63 N
ATOM 24 C4 G B 53 -23.261 -79.766 47.881 1.00 8.63 C
ATOM 25 P G B 54 -16.491 -80.435 49.693 1.00 63.19 P
ATOM 26 OP1 G B 54 -16.288 -81.837 50.084 1.00 44.53 O
ATOM 27 OP2 G B 54 -15.908 -79.355 50.525 1.00 44.53 O
ATOM 28 O5' G B 54 -15.980 -80.274 48.196 1.00 37.38 O
TER
Atoms:
C4: (-23.299,-82.109,45.222)
N3: (-24.504,-81.969,44.562)
OP1: (-19.130,-78.042,38.406)
OP2: (-18.417,-77.945,40.866)
C2: (-24.728,-81.316,43.374)
C1': (-23.809,-79.968,41.559)
C3': (-23.058,-78.265,40.086)
O5': (-20.383,-79.316,40.145)
O4': (-23.165,-80.632,40.494)
C5': (-21.261,-79.898,39.164)
P: (-18.970,-78.714,39.715)
C4': (-22.709,-79.648,39.527)
C2': (-23.253,-78.542,41.578)
O2': (-24.171,-77.663,42.205)
N1: (-23.608,-80.732,42.802)
O4: (-23.270,-82.680,46.318)
O2: (-25.836,-81.261,42.867)
C6: (-22.369,-80.853,43.399)
C5: (-22.182,-81.503,44.557)
O3': (-24.300,-77.824,39.545)
N3: (-24.504,-81.969,44.562)
OP1: (-19.130,-78.042,38.406)
OP2: (-18.417,-77.945,40.866)
C2: (-24.728,-81.316,43.374)
C1': (-23.809,-79.968,41.559)
C3': (-23.058,-78.265,40.086)
O5': (-20.383,-79.316,40.145)
O4': (-23.165,-80.632,40.494)
C5': (-21.261,-79.898,39.164)
P: (-18.970,-78.714,39.715)
C4': (-22.709,-79.648,39.527)
C2': (-23.253,-78.542,41.578)
O2': (-24.171,-77.663,42.205)
N1: (-23.608,-80.732,42.802)
O4: (-23.270,-82.680,46.318)
O2: (-25.836,-81.261,42.867)
C6: (-22.369,-80.853,43.399)
C5: (-22.182,-81.503,44.557)
O3': (-24.300,-77.824,39.545)
OP1: (-17.159,-74.861,48.948)
OP2: (-19.029,-74.432,47.212)
C3': (-18.581,-79.002,49.055)
C1': (-20.808,-79.551,48.455)
C5': (-19.442,-76.846,50.104)
O6: (-26.248,-79.448,45.919)
O4': (-20.899,-78.720,49.588)
C8: (-22.050,-78.648,46.418)
C2: (-24.932,-80.777,48.921)
C6: (-25.401,-79.706,46.779)
C5: (-24.022,-79.358,46.809)
C4: (-23.261,-79.766,47.881)
P: (-18.615,-74.856,48.579)
C4': (-19.562,-78.349,50.024)
C2': (-19.442,-79.271,47.822)
O2': (-18.971,-80.358,47.047)
N1: (-25.769,-80.429,47.900)
N2: (-25.495,-81.464,49.923)
N3: (-23.646,-80.470,48.964)
N7: (-23.249,-78.652,45.897)
N9: (-21.983,-79.318,47.617)
O5': (-19.253,-76.298,48.783)
O3': (-18.074,-80.214,49.597)
OP2: (-19.029,-74.432,47.212)
C3': (-18.581,-79.002,49.055)
C1': (-20.808,-79.551,48.455)
C5': (-19.442,-76.846,50.104)
O6: (-26.248,-79.448,45.919)
O4': (-20.899,-78.720,49.588)
C8: (-22.050,-78.648,46.418)
C2: (-24.932,-80.777,48.921)
C6: (-25.401,-79.706,46.779)
C5: (-24.022,-79.358,46.809)
C4: (-23.261,-79.766,47.881)
P: (-18.615,-74.856,48.579)
C4': (-19.562,-78.349,50.024)
C2': (-19.442,-79.271,47.822)
O2': (-18.971,-80.358,47.047)
N1: (-25.769,-80.429,47.900)
N2: (-25.495,-81.464,49.923)
N3: (-23.646,-80.470,48.964)
N7: (-23.249,-78.652,45.897)
N9: (-21.983,-79.318,47.617)
O5': (-19.253,-76.298,48.783)
O3': (-18.074,-80.214,49.597)
Image (generated by PyMOL):