ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:954:921

Extra

PDB:
ATOM 1 O3' A A 53 69.333 6.592 112.190 1.00 82.45 O
ATOM 2 P U A 54 67.786 6.517 112.627 1.00 82.14 P
ATOM 3 OP1 U A 54 67.779 6.237 114.083 1.00 81.36 O
ATOM 4 OP2 U A 54 67.052 5.618 111.692 1.00 82.04 O
ATOM 5 O5' U A 54 67.256 8.004 112.417 1.00 83.24 O
ATOM 6 C5' U A 54 68.042 9.116 112.882 1.00 83.35 C
ATOM 7 C4' U A 54 67.392 10.434 112.528 1.00 81.11 C
ATOM 8 O4' U A 54 67.341 10.608 111.083 1.00 81.02 O
ATOM 9 C3' U A 54 65.980 10.672 113.048 1.00 79.39 C
ATOM 10 O3' U A 54 65.910 11.995 113.540 1.00 78.65 O
ATOM 11 C2' U A 54 65.119 10.522 111.796 1.00 80.32 C
ATOM 12 O2' U A 54 63.934 11.294 111.845 1.00 81.95 O
ATOM 13 C1' U A 54 66.055 11.057 110.714 1.00 80.43 C
ATOM 14 N1 U A 54 65.758 10.593 109.345 1.00 79.35 N
ATOM 15 C2 U A 54 65.690 11.551 108.342 1.00 78.08 C
ATOM 16 O2 U A 54 65.891 12.738 108.541 1.00 76.90 O
ATOM 17 N3 U A 54 65.375 11.068 107.096 1.00 77.10 N
ATOM 18 C4 U A 54 65.126 9.757 106.749 1.00 77.96 C
ATOM 19 O4 U A 54 64.789 9.488 105.591 1.00 77.14 O
ATOM 20 C5 U A 54 65.233 8.824 107.830 1.00 78.17 C
ATOM 21 C6 U A 54 65.540 9.261 109.059 1.00 79.12 C
ATOM 22 P A A 55 66.321 12.292 115.064 1.00 79.05 P
ATOM 23 OP1 A A 55 66.055 11.057 115.845 1.00 79.79 O
ATOM 24 OP2 A A 55 65.688 13.572 115.483 1.00 78.85 O
ATOM 25 O5' A A 55 67.900 12.505 115.002 1.00 76.68 O
TER

ATOM 1 O3' G B 20 58.234 8.639 112.203 1.00 83.09 O
ATOM 2 P G B 21 59.398 7.533 112.186 1.00 84.00 P
ATOM 3 OP1 G B 21 59.148 6.611 113.318 1.00 84.15 O
ATOM 4 OP2 G B 21 60.716 8.212 112.080 1.00 83.94 O
ATOM 5 O5' G B 21 59.098 6.755 110.828 1.00 86.40 O
ATOM 6 C5' G B 21 60.150 6.139 110.081 1.00 90.73 C
ATOM 7 C4' G B 21 60.006 6.455 108.613 1.00 94.23 C
ATOM 8 O4' G B 21 59.695 7.859 108.438 1.00 92.73 O
ATOM 9 C3' G B 21 61.288 6.218 107.836 1.00 98.33 C
ATOM 10 O3' G B 21 61.336 4.860 107.393 1.00107.23 O
ATOM 11 C2' G B 21 61.200 7.228 106.696 1.00 95.47 C
ATOM 12 O2' G B 21 60.433 6.757 105.607 1.00 96.25 O
ATOM 13 C1' G B 21 60.459 8.391 107.370 1.00 92.23 C
ATOM 14 N9 G B 21 61.273 9.482 107.906 1.00 89.15 N
ATOM 15 C8 G B 21 61.896 9.525 109.133 1.00 87.79 C
ATOM 16 N7 G B 21 62.477 10.669 109.375 1.00 86.06 N
ATOM 17 C5 G B 21 62.241 11.423 108.233 1.00 85.45 C
ATOM 18 C6 G B 21 62.613 12.754 107.922 1.00 83.83 C
ATOM 19 O6 G B 21 63.230 13.564 108.620 1.00 83.65 O
ATOM 20 N1 G B 21 62.182 13.120 106.653 1.00 82.45 N
ATOM 21 C2 G B 21 61.482 12.315 105.795 1.00 82.68 C
ATOM 22 N2 G B 21 61.174 12.848 104.609 1.00 82.34 N
ATOM 23 N3 G B 21 61.114 11.078 106.076 1.00 84.31 N
ATOM 24 C4 G B 21 61.523 10.698 107.305 1.00 86.38 C
ATOM 25 P U B 22 62.511 3.889 107.908 1.00113.25 P
ATOM 26 OP1 U B 22 62.790 4.223 109.333 1.00112.66 O
ATOM 27 OP2 U B 22 63.615 3.941 106.912 1.00112.93 O
ATOM 28 O5' U B 22 61.872 2.426 107.868 1.00116.98 O
TER

Atoms:
C4: (65.126,9.757,106.749)
N3: (65.375,11.068,107.096)
OP1: (67.779,6.237,114.083)
OP2: (67.052,5.618,111.692)
C2: (65.690,11.551,108.342)
C1': (66.055,11.057,110.714)
C3': (65.980,10.672,113.048)
O5': (67.256,8.004,112.417)
O4': (67.341,10.608,111.083)
C5': (68.042,9.116,112.882)
P: (67.786,6.517,112.627)
C4': (67.392,10.434,112.528)
C2': (65.119,10.522,111.796)
O2': (63.934,11.294,111.845)
N1: (65.758,10.593,109.345)
O4: (64.789,9.488,105.591)
O2: (65.891,12.738,108.541)
C6: (65.540,9.261,109.059)
C5: (65.233,8.824,107.830)
O3': (65.910,11.995,113.540)
OP1: (59.148,6.611,113.318)
OP2: (60.716,8.212,112.080)
C3': (61.288,6.218,107.836)
C1': (60.459,8.391,107.370)
C5': (60.150,6.139,110.081)
O6: (63.230,13.564,108.620)
O4': (59.695,7.859,108.438)
C8: (61.896,9.525,109.133)
C2: (61.482,12.315,105.795)
C6: (62.613,12.754,107.922)
C5: (62.241,11.423,108.233)
C4: (61.523,10.698,107.305)
P: (59.398,7.533,112.186)
C4': (60.006,6.455,108.613)
C2': (61.200,7.228,106.696)
O2': (60.433,6.757,105.607)
N1: (62.182,13.120,106.653)
N2: (61.174,12.848,104.609)
N3: (61.114,11.078,106.076)
N7: (62.477,10.669,109.375)
N9: (61.273,9.482,107.906)
O5': (59.098,6.755,110.828)
O3': (61.336,4.860,107.393)
Image (generated by PyMOL):
PyMOL image
show in jmol