ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A271:A355

Extra

PDB:
ATOM 1 O3' C A 270 65.206 101.232 -12.724 1.00138.71 O
ATOM 2 P U A 271 64.346 102.581 -12.928 1.00139.66 P
ATOM 3 OP1 U A 271 62.915 102.185 -12.881 1.00139.22 O
ATOM 4 OP2 U A 271 64.860 103.328 -14.106 1.00139.74 O
ATOM 5 O5' U A 271 64.673 103.420 -11.611 1.00140.53 O
ATOM 6 C5' U A 271 65.168 102.743 -10.437 1.00141.50 C
ATOM 7 C4' U A 271 66.236 103.562 -9.753 1.00142.07 C
ATOM 8 O4' U A 271 67.078 104.206 -10.743 1.00142.14 O
ATOM 9 C3' U A 271 65.710 104.695 -8.897 1.00142.37 C
ATOM 10 O3' U A 271 65.375 104.188 -7.603 1.00142.79 O
ATOM 11 C2' U A 271 66.902 105.649 -8.857 1.00142.26 C
ATOM 12 O2' U A 271 67.896 105.273 -7.921 1.00142.77 O
ATOM 13 C1' U A 271 67.481 105.472 -10.265 1.00141.77 C
ATOM 14 N1 U A 271 67.074 106.487 -11.247 1.00141.13 N
ATOM 15 C2 U A 271 68.078 107.197 -11.879 1.00141.19 C
ATOM 16 O2 U A 271 69.267 106.998 -11.670 1.00141.80 O
ATOM 17 N3 U A 271 67.640 108.146 -12.769 1.00140.72 N
ATOM 18 C4 U A 271 66.332 108.448 -13.087 1.00140.06 C
ATOM 19 O4 U A 271 66.096 109.384 -13.854 1.00139.54 O
ATOM 20 C5 U A 271 65.358 107.659 -12.406 1.00140.02 C
ATOM 21 C6 U A 271 65.749 106.731 -11.531 1.00140.38 C
ATOM 22 P C A 272 64.210 103.077 -7.446 1.00143.17 P
ATOM 23 OP1 C A 272 64.857 101.730 -7.506 1.00142.77 O
ATOM 24 OP2 C A 272 63.114 103.405 -8.396 1.00143.43 O
ATOM 25 O5' C A 272 63.644 103.302 -5.972 1.00141.85 O
TER

ATOM 1 O3' U B 354 73.846 112.655 -8.902 1.00109.61 O
ATOM 2 P G B 355 74.088 111.618 -10.108 1.00111.88 P
ATOM 3 OP1 G B 355 75.529 111.730 -10.468 1.00111.31 O
ATOM 4 OP2 G B 355 73.045 111.861 -11.150 1.00111.62 O
ATOM 5 O5' G B 355 73.835 110.186 -9.445 1.00112.42 O
ATOM 6 C5' G B 355 74.413 109.857 -8.161 1.00114.22 C
ATOM 7 C4' G B 355 73.513 108.905 -7.397 1.00115.35 C
ATOM 8 O4' G B 355 72.165 109.447 -7.380 1.00115.65 O
ATOM 9 C3' G B 355 73.382 107.482 -7.936 1.00115.94 C
ATOM 10 O3' G B 355 73.154 106.600 -6.841 1.00117.45 O
ATOM 11 C2' G B 355 72.134 107.562 -8.809 1.00115.53 C
ATOM 12 O2' G B 355 71.462 106.322 -8.928 1.00114.44 O
ATOM 13 C1' G B 355 71.280 108.557 -8.027 1.00115.50 C
ATOM 14 N9 G B 355 70.406 109.354 -8.878 1.00115.59 N
ATOM 15 C8 G B 355 70.753 110.085 -9.995 1.00115.56 C
ATOM 16 N7 G B 355 69.737 110.693 -10.543 1.00115.83 N
ATOM 17 C5 G B 355 68.657 110.341 -9.744 1.00115.78 C
ATOM 18 C6 G B 355 67.285 110.689 -9.844 1.00115.91 C
ATOM 19 O6 G B 355 66.730 111.398 -10.701 1.00116.53 O
ATOM 20 N1 G B 355 66.537 110.120 -8.812 1.00115.32 N
ATOM 21 C2 G B 355 67.046 109.320 -7.814 1.00114.77 C
ATOM 22 N2 G B 355 66.179 108.888 -6.895 1.00113.94 N
ATOM 23 N3 G B 355 68.315 108.977 -7.720 1.00114.75 N
ATOM 24 C4 G B 355 69.059 109.520 -8.709 1.00115.50 C
ATOM 25 P C B 356 73.978 105.215 -6.729 1.00118.54 P
ATOM 26 OP1 C B 356 75.256 105.466 -6.004 1.00117.99 O
ATOM 27 OP2 C B 356 74.008 104.569 -8.068 1.00118.62 O
ATOM 28 O5' C B 356 73.062 104.326 -5.775 1.00117.55 O
TER

Atoms:
C4: (66.332,108.448,-13.087)
N3: (67.640,108.146,-12.769)
OP1: (62.915,102.185,-12.881)
OP2: (64.860,103.328,-14.106)
C2: (68.078,107.197,-11.879)
C1': (67.481,105.472,-10.265)
C3': (65.710,104.695,-8.897)
O5': (64.673,103.420,-11.611)
O4': (67.078,104.206,-10.743)
C5': (65.168,102.743,-10.437)
P: (64.346,102.581,-12.928)
C4': (66.236,103.562,-9.753)
C2': (66.902,105.649,-8.857)
O2': (67.896,105.273,-7.921)
N1: (67.074,106.487,-11.247)
O4: (66.096,109.384,-13.854)
O2: (69.267,106.998,-11.670)
C6: (65.749,106.731,-11.531)
C5: (65.358,107.659,-12.406)
O3': (65.375,104.188,-7.603)
OP1: (75.529,111.730,-10.468)
OP2: (73.045,111.861,-11.150)
C3': (73.382,107.482,-7.936)
C1': (71.280,108.557,-8.027)
C5': (74.413,109.857,-8.161)
O6: (66.730,111.398,-10.701)
O4': (72.165,109.447,-7.380)
C8: (70.753,110.085,-9.995)
C2: (67.046,109.320,-7.814)
C6: (67.285,110.689,-9.844)
C5: (68.657,110.341,-9.744)
C4: (69.059,109.520,-8.709)
P: (74.088,111.618,-10.108)
C4': (73.513,108.905,-7.397)
C2': (72.134,107.562,-8.809)
O2': (71.462,106.322,-8.928)
N1: (66.537,110.120,-8.812)
N2: (66.179,108.888,-6.895)
N3: (68.315,108.977,-7.720)
N7: (69.737,110.693,-10.543)
N9: (70.406,109.354,-8.878)
O5': (73.835,110.186,-9.445)
O3': (73.154,106.600,-6.841)
Image (generated by PyMOL):
PyMOL image
show in jmol