ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:954:921

Extra

PDB:
ATOM 1 O3' A A 53 68.932 5.553 111.538 1.00 87.21 O
ATOM 2 P U A 54 67.380 5.344 111.914 1.00 86.30 P
ATOM 3 OP1 U A 54 67.345 4.869 113.319 1.00 86.14 O
ATOM 4 OP2 U A 54 66.705 4.556 110.845 1.00 84.74 O
ATOM 5 O5' U A 54 66.794 6.822 111.905 1.00 86.83 O
ATOM 6 C5' U A 54 67.592 7.899 112.418 1.00 86.71 C
ATOM 7 C4' U A 54 67.044 9.230 111.980 1.00 84.82 C
ATOM 8 O4' U A 54 66.984 9.279 110.526 1.00 82.95 O
ATOM 9 C3' U A 54 65.641 9.565 112.476 1.00 83.95 C
ATOM 10 O3' U A 54 65.669 10.874 113.024 1.00 83.72 O
ATOM 11 C2' U A 54 64.794 9.491 111.203 1.00 84.14 C
ATOM 12 O2' U A 54 63.674 10.354 111.206 1.00 86.45 O
ATOM 13 C1' U A 54 65.799 9.935 110.148 1.00 82.75 C
ATOM 14 N1 U A 54 65.466 9.567 108.763 1.00 80.62 N
ATOM 15 C2 U A 54 65.468 10.578 107.813 1.00 79.82 C
ATOM 16 O2 U A 54 65.730 11.743 108.076 1.00 78.72 O
ATOM 17 N3 U A 54 65.149 10.178 106.541 1.00 78.63 N
ATOM 18 C4 U A 54 64.823 8.907 106.127 1.00 78.73 C
ATOM 19 O4 U A 54 64.547 8.709 104.942 1.00 77.71 O
ATOM 20 C5 U A 54 64.843 7.921 107.162 1.00 79.13 C
ATOM 21 C6 U A 54 65.159 8.275 108.412 1.00 79.61 C
ATOM 22 P A A 55 66.124 11.078 114.556 1.00 85.65 P
ATOM 23 OP1 A A 55 66.150 9.738 115.205 1.00 86.20 O
ATOM 24 OP2 A A 55 65.325 12.175 115.171 1.00 85.01 O
ATOM 25 O5' A A 55 67.638 11.564 114.450 1.00 83.41 O
TER

ATOM 1 O3' G B 20 57.887 7.628 111.551 1.00 92.93 O
ATOM 2 P G B 21 59.004 6.485 111.680 1.00 93.58 P
ATOM 3 OP1 G B 21 58.746 5.757 112.948 1.00 93.72 O
ATOM 4 OP2 G B 21 60.339 7.093 111.448 1.00 93.63 O
ATOM 5 O5' G B 21 58.658 5.526 110.455 1.00 92.76 O
ATOM 6 C5' G B 21 59.698 4.922 109.684 1.00 94.40 C
ATOM 7 C4' G B 21 59.568 5.303 108.229 1.00 96.07 C
ATOM 8 O4' G B 21 59.290 6.721 108.102 1.00 93.95 O
ATOM 9 C3' G B 21 60.852 5.078 107.453 1.00 99.16 C
ATOM 10 O3' G B 21 60.926 3.721 107.011 1.00107.15 O
ATOM 11 C2' G B 21 60.762 6.107 106.329 1.00 96.16 C
ATOM 12 O2' G B 21 59.972 5.667 105.241 1.00 97.04 O
ATOM 13 C1' G B 21 60.046 7.266 107.032 1.00 92.18 C
ATOM 14 N9 G B 21 60.891 8.324 107.586 1.00 87.53 N
ATOM 15 C8 G B 21 61.488 8.331 108.823 1.00 86.06 C
ATOM 16 N7 G B 21 62.110 9.446 109.088 1.00 84.07 N
ATOM 17 C5 G B 21 61.930 10.220 107.952 1.00 83.32 C
ATOM 18 C6 G B 21 62.365 11.539 107.665 1.00 81.64 C
ATOM 19 O6 G B 21 63.005 12.315 108.387 1.00 78.79 O
ATOM 20 N1 G B 21 61.975 11.939 106.393 1.00 80.76 N
ATOM 21 C2 G B 21 61.257 11.175 105.511 1.00 82.07 C
ATOM 22 N2 G B 21 60.987 11.742 104.329 1.00 80.81 N
ATOM 23 N3 G B 21 60.835 9.944 105.768 1.00 83.82 N
ATOM 24 C4 G B 21 61.203 9.534 107.002 1.00 84.98 C
ATOM 25 P U B 22 62.011 2.726 107.665 1.00112.89 P
ATOM 26 OP1 U B 22 61.971 2.908 109.140 1.00111.89 O
ATOM 27 OP2 U B 22 63.296 2.909 106.938 1.00112.62 O
ATOM 28 O5' U B 22 61.467 1.256 107.359 1.00117.12 O
TER

Atoms:
C4: (64.823,8.907,106.127)
N3: (65.149,10.178,106.541)
OP1: (67.345,4.869,113.319)
OP2: (66.705,4.556,110.845)
C2: (65.468,10.578,107.813)
C1': (65.799,9.935,110.148)
C3': (65.641,9.565,112.476)
O5': (66.794,6.822,111.905)
O4': (66.984,9.279,110.526)
C5': (67.592,7.899,112.418)
P: (67.380,5.344,111.914)
C4': (67.044,9.230,111.980)
C2': (64.794,9.491,111.203)
O2': (63.674,10.354,111.206)
N1: (65.466,9.567,108.763)
O4: (64.547,8.709,104.942)
O2: (65.730,11.743,108.076)
C6: (65.159,8.275,108.412)
C5: (64.843,7.921,107.162)
O3': (65.669,10.874,113.024)
OP1: (58.746,5.757,112.948)
OP2: (60.339,7.093,111.448)
C3': (60.852,5.078,107.453)
C1': (60.046,7.266,107.032)
C5': (59.698,4.922,109.684)
O6: (63.005,12.315,108.387)
O4': (59.290,6.721,108.102)
C8: (61.488,8.331,108.823)
C2: (61.257,11.175,105.511)
C6: (62.365,11.539,107.665)
C5: (61.930,10.220,107.952)
C4: (61.203,9.534,107.002)
P: (59.004,6.485,111.680)
C4': (59.568,5.303,108.229)
C2': (60.762,6.107,106.329)
O2': (59.972,5.667,105.241)
N1: (61.975,11.939,106.393)
N2: (60.987,11.742,104.329)
N3: (60.835,9.944,105.768)
N7: (62.110,9.446,109.088)
N9: (60.891,8.324,107.586)
O5': (58.658,5.526,110.455)
O3': (60.926,3.721,107.011)
Image (generated by PyMOL):
PyMOL image
show in jmol