ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:52622:52569

Extra

PDB:
ATOM 1 O3' U A2621 134.861 1.813 241.556 1.00 38.95 O
ATOM 2 P U A2622 134.967 0.778 240.372 1.00 40.59 P
ATOM 3 OP1 U A2622 133.643 0.696 239.744 1.00 40.74 O
ATOM 4 OP2 U A2622 135.560 -0.413 240.917 1.00 40.56 O
ATOM 5 O5' U A2622 135.968 1.490 239.384 1.00 40.55 O
ATOM 6 C5' U A2622 135.584 2.678 238.709 1.00 40.58 C
ATOM 7 C4' U A2622 136.731 3.624 238.562 1.00 40.48 C
ATOM 8 O4' U A2622 137.361 3.814 239.840 1.00 40.34 O
ATOM 9 C3' U A2622 137.874 3.170 237.670 1.00 40.50 C
ATOM 10 O3' U A2622 137.616 3.355 236.289 1.00 40.63 O
ATOM 11 C2' U A2622 139.022 4.020 238.167 1.00 40.36 C
ATOM 12 O2' U A2622 138.903 5.333 237.666 1.00 40.37 O
ATOM 13 C1' U A2622 138.740 4.063 239.652 1.00 40.26 C
ATOM 14 N1 U A2622 139.539 3.061 240.408 1.00 40.19 N
ATOM 15 C2 U A2622 140.846 3.421 240.675 1.00 40.09 C
ATOM 16 O2 U A2622 141.319 4.465 240.294 1.00 40.06 O
ATOM 17 N3 U A2622 141.609 2.517 241.372 1.00 40.04 N
ATOM 18 C4 U A2622 141.192 1.324 241.891 1.00 40.07 C
ATOM 19 O4 U A2622 141.979 0.630 242.546 1.00 40.03 O
ATOM 20 C5 U A2622 139.814 1.038 241.591 1.00 40.18 C
ATOM 21 C6 U A2622 139.053 1.866 240.877 1.00 40.23 C
ATOM 22 P C A2623 137.260 2.110 235.366 1.00 54.45 P
ATOM 23 OP1 C A2623 136.432 2.642 234.249 1.00 54.60 O
ATOM 24 OP2 C A2623 136.698 1.045 236.238 1.00 54.45 O
ATOM 25 O5' C A2623 138.657 1.636 234.839 1.00 54.44 O
TER

ATOM 1 O3' G B2568 137.293 -6.543 235.871 1.00 36.24 O
ATOM 2 P G B2569 135.837 -5.835 235.922 1.00 41.64 P
ATOM 3 OP1 G B2569 134.882 -6.854 236.350 1.00 41.75 O
ATOM 4 OP2 G B2569 135.630 -5.172 234.641 1.00 41.73 O
ATOM 5 O5' G B2569 135.994 -4.737 237.052 1.00 41.43 O
ATOM 6 C5' G B2569 136.919 -3.670 236.910 1.00 41.31 C
ATOM 7 C4' G B2569 137.917 -3.652 238.025 1.00 41.14 C
ATOM 8 O4' G B2569 139.025 -2.795 237.647 1.00 41.05 O
ATOM 9 C3' G B2569 137.418 -3.124 239.378 1.00 41.03 C
ATOM 10 O3' G B2569 138.033 -3.883 240.451 1.00 40.96 O
ATOM 11 C2' G B2569 137.970 -1.708 239.397 1.00 40.90 C
ATOM 12 O2' G B2569 138.121 -1.148 240.687 1.00 40.76 O
ATOM 13 C1' G B2569 139.315 -1.957 238.742 1.00 40.89 C
ATOM 14 N9 G B2569 140.028 -0.756 238.318 1.00 40.81 N
ATOM 15 C8 G B2569 139.661 0.313 237.588 1.00 40.84 C
ATOM 16 N7 G B2569 140.598 1.198 237.553 1.00 40.75 N
ATOM 17 C5 G B2569 141.604 0.672 238.314 1.00 40.66 C
ATOM 18 C6 G B2569 142.887 1.167 238.638 1.00 40.56 C
ATOM 19 O6 G B2569 143.363 2.252 238.269 1.00 40.52 O
ATOM 20 N1 G B2569 143.626 0.305 239.447 1.00 40.51 N
ATOM 21 C2 G B2569 143.175 -0.906 239.892 1.00 40.55 C
ATOM 22 N2 G B2569 144.012 -1.653 240.657 1.00 40.51 N
ATOM 23 N3 G B2569 141.959 -1.349 239.586 1.00 40.65 N
ATOM 24 C4 G B2569 141.253 -0.519 238.803 1.00 40.70 C
ATOM 25 P A B2570 137.286 -5.185 240.959 1.00 34.30 P
ATOM 26 OP1 A B2570 135.995 -4.878 240.718 1.00 34.38 O
ATOM 27 OP2 A B2570 137.662 -5.537 242.316 1.00 34.21 O
ATOM 28 O5' A B2570 137.763 -6.337 239.958 1.00 34.43 O
TER

Atoms:
C4: (141.192,1.324,241.891)
N3: (141.609,2.517,241.372)
OP1: (133.643,0.696,239.744)
OP2: (135.560,-0.413,240.917)
C2: (140.846,3.421,240.675)
C1': (138.740,4.063,239.652)
C3': (137.874,3.170,237.670)
O5': (135.968,1.490,239.384)
O4': (137.361,3.814,239.840)
C5': (135.584,2.678,238.709)
P: (134.967,0.778,240.372)
C4': (136.731,3.624,238.562)
C2': (139.022,4.020,238.167)
O2': (138.903,5.333,237.666)
N1: (139.539,3.061,240.408)
O4: (141.979,0.630,242.546)
O2: (141.319,4.465,240.294)
C6: (139.053,1.866,240.877)
C5: (139.814,1.038,241.591)
O3': (137.616,3.355,236.289)
OP1: (134.882,-6.854,236.350)
OP2: (135.630,-5.172,234.641)
C3': (137.418,-3.124,239.378)
C1': (139.315,-1.957,238.742)
C5': (136.919,-3.670,236.910)
O6: (143.363,2.252,238.269)
O4': (139.025,-2.795,237.647)
C8: (139.661,0.313,237.588)
C2: (143.175,-0.906,239.892)
C6: (142.887,1.167,238.638)
C5: (141.604,0.672,238.314)
C4: (141.253,-0.519,238.803)
P: (135.837,-5.835,235.922)
C4': (137.917,-3.652,238.025)
C2': (137.970,-1.708,239.397)
O2': (138.121,-1.148,240.687)
N1: (143.626,0.305,239.447)
N2: (144.012,-1.653,240.657)
N3: (141.959,-1.349,239.586)
N7: (140.598,1.198,237.553)
N9: (140.028,-0.756,238.318)
O5': (135.994,-4.737,237.052)
O3': (138.033,-3.883,240.451)
Image (generated by PyMOL):
PyMOL image
show in jmol