Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0271:0355
Extra
PDB:
ATOM 1 O3' C A 270 65.148 101.386 -13.398 1.00137.63 O
ATOM 2 P U A 271 64.297 102.746 -13.546 1.00138.92 P
ATOM 3 OP1 U A 271 62.865 102.388 -13.708 1.00138.02 O
ATOM 4 OP2 U A 271 64.962 103.579 -14.580 1.00138.79 O
ATOM 5 O5' U A 271 64.480 103.472 -12.136 1.00140.20 O
ATOM 6 C5' U A 271 65.002 102.750 -10.997 1.00141.97 C
ATOM 7 C4' U A 271 66.066 103.563 -10.289 1.00143.01 C
ATOM 8 O4' U A 271 66.879 104.252 -11.276 1.00143.78 O
ATOM 9 C3' U A 271 65.560 104.674 -9.386 1.00143.36 C
ATOM 10 O3' U A 271 65.253 104.158 -8.095 1.00143.16 O
ATOM 11 C2' U A 271 66.761 105.612 -9.327 1.00143.71 C
ATOM 12 O2' U A 271 67.762 105.162 -8.432 1.00144.08 O
ATOM 13 C1' U A 271 67.299 105.503 -10.757 1.00143.75 C
ATOM 14 N1 U A 271 66.846 106.566 -11.671 1.00143.52 N
ATOM 15 C2 U A 271 67.817 107.360 -12.263 1.00143.51 C
ATOM 16 O2 U A 271 69.016 107.206 -12.072 1.00143.37 O
ATOM 17 N3 U A 271 67.334 108.342 -13.091 1.00143.81 N
ATOM 18 C4 U A 271 66.013 108.610 -13.382 1.00143.90 C
ATOM 19 O4 U A 271 65.735 109.570 -14.105 1.00144.13 O
ATOM 20 C5 U A 271 65.073 107.742 -12.743 1.00143.37 C
ATOM 21 C6 U A 271 65.508 106.775 -11.931 1.00143.11 C
ATOM 22 P C A 272 63.886 103.340 -7.859 1.00143.29 P
ATOM 23 OP1 C A 272 64.248 101.897 -7.855 1.00143.60 O
ATOM 24 OP2 C A 272 62.844 103.833 -8.795 1.00142.96 O
ATOM 25 O5' C A 272 63.451 103.740 -6.381 1.00141.90 O
TER
ATOM 1 O3' U B 354 73.653 112.735 -9.577 1.00105.15 O
ATOM 2 P G B 355 73.773 111.586 -10.697 1.00105.94 P
ATOM 3 OP1 G B 355 75.187 111.589 -11.153 1.00105.77 O
ATOM 4 OP2 G B 355 72.678 111.768 -11.689 1.00105.52 O
ATOM 5 O5' G B 355 73.499 110.231 -9.907 1.00105.51 O
ATOM 6 C5' G B 355 74.031 110.024 -8.587 1.00106.49 C
ATOM 7 C4' G B 355 73.156 109.063 -7.817 1.00107.52 C
ATOM 8 O4' G B 355 71.804 109.602 -7.765 1.00107.61 O
ATOM 9 C3' G B 355 73.029 107.660 -8.403 1.00108.49 C
ATOM 10 O3' G B 355 72.872 106.723 -7.345 1.00109.16 O
ATOM 11 C2' G B 355 71.742 107.751 -9.218 1.00108.56 C
ATOM 12 O2' G B 355 71.096 106.502 -9.397 1.00108.56 O
ATOM 13 C1' G B 355 70.899 108.686 -8.353 1.00107.92 C
ATOM 14 N9 G B 355 69.913 109.446 -9.117 1.00107.63 N
ATOM 15 C8 G B 355 70.144 110.223 -10.230 1.00108.20 C
ATOM 16 N7 G B 355 69.060 110.776 -10.705 1.00108.41 N
ATOM 17 C5 G B 355 68.051 110.340 -9.855 1.00108.11 C
ATOM 18 C6 G B 355 66.653 110.609 -9.870 1.00108.42 C
ATOM 19 O6 G B 355 66.006 111.304 -10.668 1.00108.58 O
ATOM 20 N1 G B 355 66.000 109.971 -8.818 1.00107.81 N
ATOM 21 C2 G B 355 66.608 109.175 -7.877 1.00107.04 C
ATOM 22 N2 G B 355 65.806 108.654 -6.938 1.00107.19 N
ATOM 23 N3 G B 355 67.905 108.910 -7.857 1.00106.65 N
ATOM 24 C4 G B 355 68.562 109.522 -8.867 1.00107.44 C
ATOM 25 P C B 356 73.680 105.332 -7.374 1.00109.54 P
ATOM 26 OP1 C B 356 75.025 105.567 -6.778 1.00108.84 O
ATOM 27 OP2 C B 356 73.571 104.751 -8.737 1.00109.01 O
ATOM 28 O5' C B 356 72.848 104.414 -6.375 1.00109.54 O
TER
ATOM 2 P U A 271 64.297 102.746 -13.546 1.00138.92 P
ATOM 3 OP1 U A 271 62.865 102.388 -13.708 1.00138.02 O
ATOM 4 OP2 U A 271 64.962 103.579 -14.580 1.00138.79 O
ATOM 5 O5' U A 271 64.480 103.472 -12.136 1.00140.20 O
ATOM 6 C5' U A 271 65.002 102.750 -10.997 1.00141.97 C
ATOM 7 C4' U A 271 66.066 103.563 -10.289 1.00143.01 C
ATOM 8 O4' U A 271 66.879 104.252 -11.276 1.00143.78 O
ATOM 9 C3' U A 271 65.560 104.674 -9.386 1.00143.36 C
ATOM 10 O3' U A 271 65.253 104.158 -8.095 1.00143.16 O
ATOM 11 C2' U A 271 66.761 105.612 -9.327 1.00143.71 C
ATOM 12 O2' U A 271 67.762 105.162 -8.432 1.00144.08 O
ATOM 13 C1' U A 271 67.299 105.503 -10.757 1.00143.75 C
ATOM 14 N1 U A 271 66.846 106.566 -11.671 1.00143.52 N
ATOM 15 C2 U A 271 67.817 107.360 -12.263 1.00143.51 C
ATOM 16 O2 U A 271 69.016 107.206 -12.072 1.00143.37 O
ATOM 17 N3 U A 271 67.334 108.342 -13.091 1.00143.81 N
ATOM 18 C4 U A 271 66.013 108.610 -13.382 1.00143.90 C
ATOM 19 O4 U A 271 65.735 109.570 -14.105 1.00144.13 O
ATOM 20 C5 U A 271 65.073 107.742 -12.743 1.00143.37 C
ATOM 21 C6 U A 271 65.508 106.775 -11.931 1.00143.11 C
ATOM 22 P C A 272 63.886 103.340 -7.859 1.00143.29 P
ATOM 23 OP1 C A 272 64.248 101.897 -7.855 1.00143.60 O
ATOM 24 OP2 C A 272 62.844 103.833 -8.795 1.00142.96 O
ATOM 25 O5' C A 272 63.451 103.740 -6.381 1.00141.90 O
TER
ATOM 1 O3' U B 354 73.653 112.735 -9.577 1.00105.15 O
ATOM 2 P G B 355 73.773 111.586 -10.697 1.00105.94 P
ATOM 3 OP1 G B 355 75.187 111.589 -11.153 1.00105.77 O
ATOM 4 OP2 G B 355 72.678 111.768 -11.689 1.00105.52 O
ATOM 5 O5' G B 355 73.499 110.231 -9.907 1.00105.51 O
ATOM 6 C5' G B 355 74.031 110.024 -8.587 1.00106.49 C
ATOM 7 C4' G B 355 73.156 109.063 -7.817 1.00107.52 C
ATOM 8 O4' G B 355 71.804 109.602 -7.765 1.00107.61 O
ATOM 9 C3' G B 355 73.029 107.660 -8.403 1.00108.49 C
ATOM 10 O3' G B 355 72.872 106.723 -7.345 1.00109.16 O
ATOM 11 C2' G B 355 71.742 107.751 -9.218 1.00108.56 C
ATOM 12 O2' G B 355 71.096 106.502 -9.397 1.00108.56 O
ATOM 13 C1' G B 355 70.899 108.686 -8.353 1.00107.92 C
ATOM 14 N9 G B 355 69.913 109.446 -9.117 1.00107.63 N
ATOM 15 C8 G B 355 70.144 110.223 -10.230 1.00108.20 C
ATOM 16 N7 G B 355 69.060 110.776 -10.705 1.00108.41 N
ATOM 17 C5 G B 355 68.051 110.340 -9.855 1.00108.11 C
ATOM 18 C6 G B 355 66.653 110.609 -9.870 1.00108.42 C
ATOM 19 O6 G B 355 66.006 111.304 -10.668 1.00108.58 O
ATOM 20 N1 G B 355 66.000 109.971 -8.818 1.00107.81 N
ATOM 21 C2 G B 355 66.608 109.175 -7.877 1.00107.04 C
ATOM 22 N2 G B 355 65.806 108.654 -6.938 1.00107.19 N
ATOM 23 N3 G B 355 67.905 108.910 -7.857 1.00106.65 N
ATOM 24 C4 G B 355 68.562 109.522 -8.867 1.00107.44 C
ATOM 25 P C B 356 73.680 105.332 -7.374 1.00109.54 P
ATOM 26 OP1 C B 356 75.025 105.567 -6.778 1.00108.84 O
ATOM 27 OP2 C B 356 73.571 104.751 -8.737 1.00109.01 O
ATOM 28 O5' C B 356 72.848 104.414 -6.375 1.00109.54 O
TER
Atoms:
C4: (66.013,108.610,-13.382)
N3: (67.334,108.342,-13.091)
OP1: (62.865,102.388,-13.708)
OP2: (64.962,103.579,-14.580)
C2: (67.817,107.360,-12.263)
C1': (67.299,105.503,-10.757)
C3': (65.560,104.674,-9.386)
O5': (64.480,103.472,-12.136)
O4': (66.879,104.252,-11.276)
C5': (65.002,102.750,-10.997)
P: (64.297,102.746,-13.546)
C4': (66.066,103.563,-10.289)
C2': (66.761,105.612,-9.327)
O2': (67.762,105.162,-8.432)
N1: (66.846,106.566,-11.671)
O4: (65.735,109.570,-14.105)
O2: (69.016,107.206,-12.072)
C6: (65.508,106.775,-11.931)
C5: (65.073,107.742,-12.743)
O3': (65.253,104.158,-8.095)
N3: (67.334,108.342,-13.091)
OP1: (62.865,102.388,-13.708)
OP2: (64.962,103.579,-14.580)
C2: (67.817,107.360,-12.263)
C1': (67.299,105.503,-10.757)
C3': (65.560,104.674,-9.386)
O5': (64.480,103.472,-12.136)
O4': (66.879,104.252,-11.276)
C5': (65.002,102.750,-10.997)
P: (64.297,102.746,-13.546)
C4': (66.066,103.563,-10.289)
C2': (66.761,105.612,-9.327)
O2': (67.762,105.162,-8.432)
N1: (66.846,106.566,-11.671)
O4: (65.735,109.570,-14.105)
O2: (69.016,107.206,-12.072)
C6: (65.508,106.775,-11.931)
C5: (65.073,107.742,-12.743)
O3': (65.253,104.158,-8.095)
OP1: (75.187,111.589,-11.153)
OP2: (72.678,111.768,-11.689)
C3': (73.029,107.660,-8.403)
C1': (70.899,108.686,-8.353)
C5': (74.031,110.024,-8.587)
O6: (66.006,111.304,-10.668)
O4': (71.804,109.602,-7.765)
C8: (70.144,110.223,-10.230)
C2: (66.608,109.175,-7.877)
C6: (66.653,110.609,-9.870)
C5: (68.051,110.340,-9.855)
C4: (68.562,109.522,-8.867)
P: (73.773,111.586,-10.697)
C4': (73.156,109.063,-7.817)
C2': (71.742,107.751,-9.218)
O2': (71.096,106.502,-9.397)
N1: (66.000,109.971,-8.818)
N2: (65.806,108.654,-6.938)
N3: (67.905,108.910,-7.857)
N7: (69.060,110.776,-10.705)
N9: (69.913,109.446,-9.117)
O5': (73.499,110.231,-9.907)
O3': (72.872,106.723,-7.345)
OP2: (72.678,111.768,-11.689)
C3': (73.029,107.660,-8.403)
C1': (70.899,108.686,-8.353)
C5': (74.031,110.024,-8.587)
O6: (66.006,111.304,-10.668)
O4': (71.804,109.602,-7.765)
C8: (70.144,110.223,-10.230)
C2: (66.608,109.175,-7.877)
C6: (66.653,110.609,-9.870)
C5: (68.051,110.340,-9.855)
C4: (68.562,109.522,-8.867)
P: (73.773,111.586,-10.697)
C4': (73.156,109.063,-7.817)
C2': (71.742,107.751,-9.218)
O2': (71.096,106.502,-9.397)
N1: (66.000,109.971,-8.818)
N2: (65.806,108.654,-6.938)
N3: (67.905,108.910,-7.857)
N7: (69.060,110.776,-10.705)
N9: (69.913,109.446,-9.117)
O5': (73.499,110.231,-9.907)
O3': (72.872,106.723,-7.345)
Image (generated by PyMOL):