Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J8G:D5:D4
Extra
PDB:
ATOM 1 O3' G A 4 9.456 40.746 -2.975 1.00 9.52 O
ATOM 2 P U A 5 9.404 39.859 -4.260 0.85 10.46 P
ATOM 3 OP1 U A 5 10.895 39.979 -4.566 0.57 13.96 O
ATOM 4 OP2 U A 5 8.565 40.602 -5.226 0.65 9.52 O
ATOM 5 O5' U A 5 9.176 38.328 -4.087 0.63 13.46 O
ATOM 6 C5' U A 5 9.409 37.406 -5.179 0.22 16.10 C
ATOM 7 C4' U A 5 10.236 36.232 -4.704 0.28 12.85 C
ATOM 8 O4' U A 5 11.550 35.613 -4.654 0.01 13.06 O
ATOM 9 C3' U A 5 9.573 35.618 -3.471 0.17 14.75 C
ATOM 10 O3' U A 5 8.568 34.609 -3.585 0.30 19.58 O
ATOM 11 C2' U A 5 10.348 36.348 -2.369 0.87 9.67 C
ATOM 12 O2' U A 5 10.212 35.265 -1.472 0.13 6.74 O
ATOM 13 C1' U A 5 11.515 35.984 -3.288 0.28 12.11 C
ATOM 14 N1 U A 5 12.682 36.819 -3.009 0.14 9.96 N
ATOM 15 C2 U A 5 13.824 36.227 -2.541 0.64 9.08 C
ATOM 16 O2 U A 5 13.966 35.022 -2.377 0.29 8.64 O
ATOM 17 N3 U A 5 14.899 37.081 -2.451 0.71 9.28 N
ATOM 18 C4 U A 5 14.889 38.469 -2.508 0.38 10.80 C
ATOM 19 O4 U A 5 15.968 38.930 -2.137 0.36 12.03 O
ATOM 20 C5 U A 5 13.663 39.005 -3.028 0.52 9.07 C
ATOM 21 C6 U A 5 12.614 38.183 -3.169 0.27 11.78 C
TER
ATOM 1 O3' G B 3 7.525 37.503 1.828 1.00 6.24 O
ATOM 2 P G B 4 7.714 37.302 0.262 1.00 7.40 P
ATOM 3 OP1 G B 4 6.354 37.503 -0.319 1.00 10.76 O
ATOM 4 OP2 G B 4 8.456 36.062 -0.027 1.00 9.03 O
ATOM 5 O5' G B 4 8.702 38.440 -0.184 1.00 6.81 O
ATOM 6 C5' G B 4 8.226 39.801 -0.161 1.00 7.35 C
ATOM 7 C4' G B 4 9.358 40.731 -0.537 1.00 6.95 C
ATOM 8 O4' G B 4 10.341 40.661 0.491 1.00 6.21 O
ATOM 9 C3' G B 4 10.152 40.318 -1.799 1.00 6.84 C
ATOM 10 O3' G B 4 9.456 40.746 -2.975 1.00 9.52 O
ATOM 11 C2' G B 4 11.464 41.099 -1.537 1.00 7.54 C
ATOM 12 O2' G B 4 11.308 42.479 -1.795 1.00 11.61 O
ATOM 13 C1' G B 4 11.655 40.904 -0.044 1.00 5.65 C
ATOM 14 N9 G B 4 12.468 39.736 0.290 1.00 4.96 N
ATOM 15 C8 G B 4 12.094 38.407 0.378 1.00 4.67 C
ATOM 16 N7 G B 4 13.120 37.630 0.660 1.00 4.46 N
ATOM 17 C5 G B 4 14.204 38.478 0.755 1.00 3.96 C
ATOM 18 C6 G B 4 15.569 38.208 0.972 1.00 3.77 C
ATOM 19 O6 G B 4 16.089 37.095 1.198 1.00 3.68 O
ATOM 20 N1 G B 4 16.340 39.361 0.920 1.00 4.02 N
ATOM 21 C2 G B 4 15.849 40.635 0.699 1.00 4.63 C
ATOM 22 N2 G B 4 16.723 41.637 0.706 1.00 5.41 N
ATOM 23 N3 G B 4 14.582 40.900 0.487 1.00 4.82 N
ATOM 24 C4 G B 4 13.810 39.796 0.502 1.00 4.44 C
ATOM 25 P U B 5 9.404 39.859 -4.260 0.85 10.46 P
ATOM 26 OP1 U B 5 10.895 39.979 -4.566 0.57 13.96 O
ATOM 27 OP2 U B 5 8.565 40.602 -5.226 0.65 9.52 O
ATOM 28 O5' U B 5 9.176 38.328 -4.087 0.63 13.46 O
TER
ATOM 2 P U A 5 9.404 39.859 -4.260 0.85 10.46 P
ATOM 3 OP1 U A 5 10.895 39.979 -4.566 0.57 13.96 O
ATOM 4 OP2 U A 5 8.565 40.602 -5.226 0.65 9.52 O
ATOM 5 O5' U A 5 9.176 38.328 -4.087 0.63 13.46 O
ATOM 6 C5' U A 5 9.409 37.406 -5.179 0.22 16.10 C
ATOM 7 C4' U A 5 10.236 36.232 -4.704 0.28 12.85 C
ATOM 8 O4' U A 5 11.550 35.613 -4.654 0.01 13.06 O
ATOM 9 C3' U A 5 9.573 35.618 -3.471 0.17 14.75 C
ATOM 10 O3' U A 5 8.568 34.609 -3.585 0.30 19.58 O
ATOM 11 C2' U A 5 10.348 36.348 -2.369 0.87 9.67 C
ATOM 12 O2' U A 5 10.212 35.265 -1.472 0.13 6.74 O
ATOM 13 C1' U A 5 11.515 35.984 -3.288 0.28 12.11 C
ATOM 14 N1 U A 5 12.682 36.819 -3.009 0.14 9.96 N
ATOM 15 C2 U A 5 13.824 36.227 -2.541 0.64 9.08 C
ATOM 16 O2 U A 5 13.966 35.022 -2.377 0.29 8.64 O
ATOM 17 N3 U A 5 14.899 37.081 -2.451 0.71 9.28 N
ATOM 18 C4 U A 5 14.889 38.469 -2.508 0.38 10.80 C
ATOM 19 O4 U A 5 15.968 38.930 -2.137 0.36 12.03 O
ATOM 20 C5 U A 5 13.663 39.005 -3.028 0.52 9.07 C
ATOM 21 C6 U A 5 12.614 38.183 -3.169 0.27 11.78 C
TER
ATOM 1 O3' G B 3 7.525 37.503 1.828 1.00 6.24 O
ATOM 2 P G B 4 7.714 37.302 0.262 1.00 7.40 P
ATOM 3 OP1 G B 4 6.354 37.503 -0.319 1.00 10.76 O
ATOM 4 OP2 G B 4 8.456 36.062 -0.027 1.00 9.03 O
ATOM 5 O5' G B 4 8.702 38.440 -0.184 1.00 6.81 O
ATOM 6 C5' G B 4 8.226 39.801 -0.161 1.00 7.35 C
ATOM 7 C4' G B 4 9.358 40.731 -0.537 1.00 6.95 C
ATOM 8 O4' G B 4 10.341 40.661 0.491 1.00 6.21 O
ATOM 9 C3' G B 4 10.152 40.318 -1.799 1.00 6.84 C
ATOM 10 O3' G B 4 9.456 40.746 -2.975 1.00 9.52 O
ATOM 11 C2' G B 4 11.464 41.099 -1.537 1.00 7.54 C
ATOM 12 O2' G B 4 11.308 42.479 -1.795 1.00 11.61 O
ATOM 13 C1' G B 4 11.655 40.904 -0.044 1.00 5.65 C
ATOM 14 N9 G B 4 12.468 39.736 0.290 1.00 4.96 N
ATOM 15 C8 G B 4 12.094 38.407 0.378 1.00 4.67 C
ATOM 16 N7 G B 4 13.120 37.630 0.660 1.00 4.46 N
ATOM 17 C5 G B 4 14.204 38.478 0.755 1.00 3.96 C
ATOM 18 C6 G B 4 15.569 38.208 0.972 1.00 3.77 C
ATOM 19 O6 G B 4 16.089 37.095 1.198 1.00 3.68 O
ATOM 20 N1 G B 4 16.340 39.361 0.920 1.00 4.02 N
ATOM 21 C2 G B 4 15.849 40.635 0.699 1.00 4.63 C
ATOM 22 N2 G B 4 16.723 41.637 0.706 1.00 5.41 N
ATOM 23 N3 G B 4 14.582 40.900 0.487 1.00 4.82 N
ATOM 24 C4 G B 4 13.810 39.796 0.502 1.00 4.44 C
ATOM 25 P U B 5 9.404 39.859 -4.260 0.85 10.46 P
ATOM 26 OP1 U B 5 10.895 39.979 -4.566 0.57 13.96 O
ATOM 27 OP2 U B 5 8.565 40.602 -5.226 0.65 9.52 O
ATOM 28 O5' U B 5 9.176 38.328 -4.087 0.63 13.46 O
TER
Atoms:
C4: (14.889,38.469,-2.508)
N3: (14.899,37.081,-2.451)
OP1: (10.895,39.979,-4.566)
OP2: (8.565,40.602,-5.226)
C2: (13.824,36.227,-2.541)
C1': (11.515,35.984,-3.288)
C3': (9.573,35.618,-3.471)
O5': (9.176,38.328,-4.087)
O4': (11.550,35.613,-4.654)
C5': (9.409,37.406,-5.179)
P: (9.404,39.859,-4.260)
C4': (10.236,36.232,-4.704)
C2': (10.348,36.348,-2.369)
O2': (10.212,35.265,-1.472)
N1: (12.682,36.819,-3.009)
O4: (15.968,38.930,-2.137)
O2: (13.966,35.022,-2.377)
C6: (12.614,38.183,-3.169)
C5: (13.663,39.005,-3.028)
O3': (8.568,34.609,-3.585)
N3: (14.899,37.081,-2.451)
OP1: (10.895,39.979,-4.566)
OP2: (8.565,40.602,-5.226)
C2: (13.824,36.227,-2.541)
C1': (11.515,35.984,-3.288)
C3': (9.573,35.618,-3.471)
O5': (9.176,38.328,-4.087)
O4': (11.550,35.613,-4.654)
C5': (9.409,37.406,-5.179)
P: (9.404,39.859,-4.260)
C4': (10.236,36.232,-4.704)
C2': (10.348,36.348,-2.369)
O2': (10.212,35.265,-1.472)
N1: (12.682,36.819,-3.009)
O4: (15.968,38.930,-2.137)
O2: (13.966,35.022,-2.377)
C6: (12.614,38.183,-3.169)
C5: (13.663,39.005,-3.028)
O3': (8.568,34.609,-3.585)
OP1: (6.354,37.503,-0.319)
OP2: (8.456,36.062,-0.027)
C3': (10.152,40.318,-1.799)
C1': (11.655,40.904,-0.044)
C5': (8.226,39.801,-0.161)
O6: (16.089,37.095,1.198)
O4': (10.341,40.661,0.491)
C8: (12.094,38.407,0.378)
C2: (15.849,40.635,0.699)
C6: (15.569,38.208,0.972)
C5: (14.204,38.478,0.755)
C4: (13.810,39.796,0.502)
P: (7.714,37.302,0.262)
C4': (9.358,40.731,-0.537)
C2': (11.464,41.099,-1.537)
O2': (11.308,42.479,-1.795)
N1: (16.340,39.361,0.920)
N2: (16.723,41.637,0.706)
N3: (14.582,40.900,0.487)
N7: (13.120,37.630,0.660)
N9: (12.468,39.736,0.290)
O5': (8.702,38.440,-0.184)
O3': (9.456,40.746,-2.975)
OP2: (8.456,36.062,-0.027)
C3': (10.152,40.318,-1.799)
C1': (11.655,40.904,-0.044)
C5': (8.226,39.801,-0.161)
O6: (16.089,37.095,1.198)
O4': (10.341,40.661,0.491)
C8: (12.094,38.407,0.378)
C2: (15.849,40.635,0.699)
C6: (15.569,38.208,0.972)
C5: (14.204,38.478,0.755)
C4: (13.810,39.796,0.502)
P: (7.714,37.302,0.262)
C4': (9.358,40.731,-0.537)
C2': (11.464,41.099,-1.537)
O2': (11.308,42.479,-1.795)
N1: (16.340,39.361,0.920)
N2: (16.723,41.637,0.706)
N3: (14.582,40.900,0.487)
N7: (13.120,37.630,0.660)
N9: (12.468,39.736,0.290)
O5': (8.702,38.440,-0.184)
O3': (9.456,40.746,-2.975)
Image (generated by PyMOL):