Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0271:0355
Extra
PDB:
ATOM 1 O3' C A 270 65.116 101.816 -13.451 1.00147.00 O
ATOM 2 P U A 271 64.294 103.205 -13.572 1.00148.34 P
ATOM 3 OP1 U A 271 62.865 102.871 -13.804 1.00147.61 O
ATOM 4 OP2 U A 271 65.002 104.089 -14.538 1.00148.43 O
ATOM 5 O5' U A 271 64.419 103.872 -12.125 1.00149.82 O
ATOM 6 C5' U A 271 64.808 103.087 -10.972 1.00151.75 C
ATOM 7 C4' U A 271 65.926 103.774 -10.210 1.00152.66 C
ATOM 8 O4' U A 271 66.802 104.441 -11.159 1.00153.20 O
ATOM 9 C3' U A 271 65.506 104.872 -9.247 1.00152.85 C
ATOM 10 O3' U A 271 65.168 104.318 -7.974 1.00152.54 O
ATOM 11 C2' U A 271 66.771 105.722 -9.157 1.00153.14 C
ATOM 12 O2' U A 271 67.746 105.163 -8.295 1.00153.13 O
ATOM 13 C1' U A 271 67.290 105.646 -10.598 1.00153.25 C
ATOM 14 N1 U A 271 66.885 106.761 -11.473 1.00153.31 N
ATOM 15 C2 U A 271 67.888 107.525 -12.056 1.00153.57 C
ATOM 16 O2 U A 271 69.082 107.307 -11.890 1.00153.85 O
ATOM 17 N3 U A 271 67.441 108.557 -12.847 1.00153.71 N
ATOM 18 C4 U A 271 66.129 108.896 -13.112 1.00153.40 C
ATOM 19 O4 U A 271 65.887 109.887 -13.807 1.00153.55 O
ATOM 20 C5 U A 271 65.158 108.055 -12.487 1.00152.81 C
ATOM 21 C6 U A 271 65.557 107.044 -11.710 1.00152.77 C
ATOM 22 P C A 272 63.721 103.644 -7.741 1.00152.18 P
ATOM 23 OP1 C A 272 63.945 102.176 -7.659 1.00152.60 O
ATOM 24 OP2 C A 272 62.758 104.185 -8.735 1.00151.41 O
ATOM 25 O5' C A 272 63.283 104.149 -6.294 1.00150.66 O
TER
ATOM 1 O3' U B 354 74.031 113.042 -9.495 1.00116.46 O
ATOM 2 P G B 355 74.148 111.894 -10.613 1.00117.83 P
ATOM 3 OP1 G B 355 75.593 111.797 -10.966 1.00116.97 O
ATOM 4 OP2 G B 355 73.144 112.181 -11.679 1.00117.12 O
ATOM 5 O5' G B 355 73.719 110.555 -9.854 1.00117.23 O
ATOM 6 C5' G B 355 74.298 110.210 -8.579 1.00117.16 C
ATOM 7 C4' G B 355 73.380 109.285 -7.807 1.00117.27 C
ATOM 8 O4' G B 355 72.057 109.890 -7.732 1.00116.95 O
ATOM 9 C3' G B 355 73.169 107.880 -8.373 1.00118.00 C
ATOM 10 O3' G B 355 72.992 106.967 -7.290 1.00119.31 O
ATOM 11 C2' G B 355 71.862 108.022 -9.150 1.00117.39 C
ATOM 12 O2' G B 355 71.147 106.807 -9.289 1.00116.50 O
ATOM 13 C1' G B 355 71.093 109.004 -8.269 1.00116.43 C
ATOM 14 N9 G B 355 70.106 109.790 -9.002 1.00115.22 N
ATOM 15 C8 G B 355 70.335 110.647 -10.055 1.00115.24 C
ATOM 16 N7 G B 355 69.244 111.202 -10.511 1.00115.32 N
ATOM 17 C5 G B 355 68.234 110.681 -9.711 1.00115.14 C
ATOM 18 C6 G B 355 66.828 110.909 -9.732 1.00115.04 C
ATOM 19 O6 G B 355 66.173 111.638 -10.491 1.00115.17 O
ATOM 20 N1 G B 355 66.180 110.180 -8.740 1.00114.60 N
ATOM 21 C2 G B 355 66.796 109.338 -7.846 1.00114.27 C
ATOM 22 N2 G B 355 65.997 108.727 -6.961 1.00114.45 N
ATOM 23 N3 G B 355 68.099 109.112 -7.820 1.00114.02 N
ATOM 24 C4 G B 355 68.752 109.811 -8.772 1.00114.77 C
ATOM 25 P C B 356 73.622 105.484 -7.370 1.00120.56 P
ATOM 26 OP1 C B 356 74.980 105.509 -6.749 1.00118.94 O
ATOM 27 OP2 C B 356 73.459 104.976 -8.759 1.00120.79 O
ATOM 28 O5' C B 356 72.664 104.632 -6.426 1.00119.89 O
TER
ATOM 2 P U A 271 64.294 103.205 -13.572 1.00148.34 P
ATOM 3 OP1 U A 271 62.865 102.871 -13.804 1.00147.61 O
ATOM 4 OP2 U A 271 65.002 104.089 -14.538 1.00148.43 O
ATOM 5 O5' U A 271 64.419 103.872 -12.125 1.00149.82 O
ATOM 6 C5' U A 271 64.808 103.087 -10.972 1.00151.75 C
ATOM 7 C4' U A 271 65.926 103.774 -10.210 1.00152.66 C
ATOM 8 O4' U A 271 66.802 104.441 -11.159 1.00153.20 O
ATOM 9 C3' U A 271 65.506 104.872 -9.247 1.00152.85 C
ATOM 10 O3' U A 271 65.168 104.318 -7.974 1.00152.54 O
ATOM 11 C2' U A 271 66.771 105.722 -9.157 1.00153.14 C
ATOM 12 O2' U A 271 67.746 105.163 -8.295 1.00153.13 O
ATOM 13 C1' U A 271 67.290 105.646 -10.598 1.00153.25 C
ATOM 14 N1 U A 271 66.885 106.761 -11.473 1.00153.31 N
ATOM 15 C2 U A 271 67.888 107.525 -12.056 1.00153.57 C
ATOM 16 O2 U A 271 69.082 107.307 -11.890 1.00153.85 O
ATOM 17 N3 U A 271 67.441 108.557 -12.847 1.00153.71 N
ATOM 18 C4 U A 271 66.129 108.896 -13.112 1.00153.40 C
ATOM 19 O4 U A 271 65.887 109.887 -13.807 1.00153.55 O
ATOM 20 C5 U A 271 65.158 108.055 -12.487 1.00152.81 C
ATOM 21 C6 U A 271 65.557 107.044 -11.710 1.00152.77 C
ATOM 22 P C A 272 63.721 103.644 -7.741 1.00152.18 P
ATOM 23 OP1 C A 272 63.945 102.176 -7.659 1.00152.60 O
ATOM 24 OP2 C A 272 62.758 104.185 -8.735 1.00151.41 O
ATOM 25 O5' C A 272 63.283 104.149 -6.294 1.00150.66 O
TER
ATOM 1 O3' U B 354 74.031 113.042 -9.495 1.00116.46 O
ATOM 2 P G B 355 74.148 111.894 -10.613 1.00117.83 P
ATOM 3 OP1 G B 355 75.593 111.797 -10.966 1.00116.97 O
ATOM 4 OP2 G B 355 73.144 112.181 -11.679 1.00117.12 O
ATOM 5 O5' G B 355 73.719 110.555 -9.854 1.00117.23 O
ATOM 6 C5' G B 355 74.298 110.210 -8.579 1.00117.16 C
ATOM 7 C4' G B 355 73.380 109.285 -7.807 1.00117.27 C
ATOM 8 O4' G B 355 72.057 109.890 -7.732 1.00116.95 O
ATOM 9 C3' G B 355 73.169 107.880 -8.373 1.00118.00 C
ATOM 10 O3' G B 355 72.992 106.967 -7.290 1.00119.31 O
ATOM 11 C2' G B 355 71.862 108.022 -9.150 1.00117.39 C
ATOM 12 O2' G B 355 71.147 106.807 -9.289 1.00116.50 O
ATOM 13 C1' G B 355 71.093 109.004 -8.269 1.00116.43 C
ATOM 14 N9 G B 355 70.106 109.790 -9.002 1.00115.22 N
ATOM 15 C8 G B 355 70.335 110.647 -10.055 1.00115.24 C
ATOM 16 N7 G B 355 69.244 111.202 -10.511 1.00115.32 N
ATOM 17 C5 G B 355 68.234 110.681 -9.711 1.00115.14 C
ATOM 18 C6 G B 355 66.828 110.909 -9.732 1.00115.04 C
ATOM 19 O6 G B 355 66.173 111.638 -10.491 1.00115.17 O
ATOM 20 N1 G B 355 66.180 110.180 -8.740 1.00114.60 N
ATOM 21 C2 G B 355 66.796 109.338 -7.846 1.00114.27 C
ATOM 22 N2 G B 355 65.997 108.727 -6.961 1.00114.45 N
ATOM 23 N3 G B 355 68.099 109.112 -7.820 1.00114.02 N
ATOM 24 C4 G B 355 68.752 109.811 -8.772 1.00114.77 C
ATOM 25 P C B 356 73.622 105.484 -7.370 1.00120.56 P
ATOM 26 OP1 C B 356 74.980 105.509 -6.749 1.00118.94 O
ATOM 27 OP2 C B 356 73.459 104.976 -8.759 1.00120.79 O
ATOM 28 O5' C B 356 72.664 104.632 -6.426 1.00119.89 O
TER
Atoms:
C4: (66.129,108.896,-13.112)
N3: (67.441,108.557,-12.847)
OP1: (62.865,102.871,-13.804)
OP2: (65.002,104.089,-14.538)
C2: (67.888,107.525,-12.056)
C1': (67.290,105.646,-10.598)
C3': (65.506,104.872,-9.247)
O5': (64.419,103.872,-12.125)
O4': (66.802,104.441,-11.159)
C5': (64.808,103.087,-10.972)
P: (64.294,103.205,-13.572)
C4': (65.926,103.774,-10.210)
C2': (66.771,105.722,-9.157)
O2': (67.746,105.163,-8.295)
N1: (66.885,106.761,-11.473)
O4: (65.887,109.887,-13.807)
O2: (69.082,107.307,-11.890)
C6: (65.557,107.044,-11.710)
C5: (65.158,108.055,-12.487)
O3': (65.168,104.318,-7.974)
N3: (67.441,108.557,-12.847)
OP1: (62.865,102.871,-13.804)
OP2: (65.002,104.089,-14.538)
C2: (67.888,107.525,-12.056)
C1': (67.290,105.646,-10.598)
C3': (65.506,104.872,-9.247)
O5': (64.419,103.872,-12.125)
O4': (66.802,104.441,-11.159)
C5': (64.808,103.087,-10.972)
P: (64.294,103.205,-13.572)
C4': (65.926,103.774,-10.210)
C2': (66.771,105.722,-9.157)
O2': (67.746,105.163,-8.295)
N1: (66.885,106.761,-11.473)
O4: (65.887,109.887,-13.807)
O2: (69.082,107.307,-11.890)
C6: (65.557,107.044,-11.710)
C5: (65.158,108.055,-12.487)
O3': (65.168,104.318,-7.974)
OP1: (75.593,111.797,-10.966)
OP2: (73.144,112.181,-11.679)
C3': (73.169,107.880,-8.373)
C1': (71.093,109.004,-8.269)
C5': (74.298,110.210,-8.579)
O6: (66.173,111.638,-10.491)
O4': (72.057,109.890,-7.732)
C8: (70.335,110.647,-10.055)
C2: (66.796,109.338,-7.846)
C6: (66.828,110.909,-9.732)
C5: (68.234,110.681,-9.711)
C4: (68.752,109.811,-8.772)
P: (74.148,111.894,-10.613)
C4': (73.380,109.285,-7.807)
C2': (71.862,108.022,-9.150)
O2': (71.147,106.807,-9.289)
N1: (66.180,110.180,-8.740)
N2: (65.997,108.727,-6.961)
N3: (68.099,109.112,-7.820)
N7: (69.244,111.202,-10.511)
N9: (70.106,109.790,-9.002)
O5': (73.719,110.555,-9.854)
O3': (72.992,106.967,-7.290)
OP2: (73.144,112.181,-11.679)
C3': (73.169,107.880,-8.373)
C1': (71.093,109.004,-8.269)
C5': (74.298,110.210,-8.579)
O6: (66.173,111.638,-10.491)
O4': (72.057,109.890,-7.732)
C8: (70.335,110.647,-10.055)
C2: (66.796,109.338,-7.846)
C6: (66.828,110.909,-9.732)
C5: (68.234,110.681,-9.711)
C4: (68.752,109.811,-8.772)
P: (74.148,111.894,-10.613)
C4': (73.380,109.285,-7.807)
C2': (71.862,108.022,-9.150)
O2': (71.147,106.807,-9.289)
N1: (66.180,110.180,-8.740)
N2: (65.997,108.727,-6.961)
N3: (68.099,109.112,-7.820)
N7: (69.244,111.202,-10.511)
N9: (70.106,109.790,-9.002)
O5': (73.719,110.555,-9.854)
O3': (72.992,106.967,-7.290)
Image (generated by PyMOL):