ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OXM:A18:A16

Extra

PDB:
ATOM 1 O3' U A 17 31.005 -59.074 20.717 1.00 86.50 O
ATOM 2 P U A 18 30.233 -57.676 20.859 1.00 83.49 P
ATOM 3 OP1 U A 18 31.157 -56.722 21.514 1.00 83.37 O
ATOM 4 OP2 U A 18 28.901 -57.946 21.449 1.00 83.29 O
ATOM 5 O5' U A 18 30.040 -57.211 19.339 1.00 80.96 O
ATOM 6 C5' U A 18 30.463 -55.929 18.875 1.00 77.14 C
ATOM 7 C4' U A 18 29.417 -55.320 17.953 1.00 73.70 C
ATOM 8 O4' U A 18 29.038 -56.239 16.893 1.00 73.88 O
ATOM 9 C3' U A 18 28.113 -54.924 18.633 1.00 71.77 C
ATOM 10 O3' U A 18 27.681 -53.704 18.062 1.00 68.22 O
ATOM 11 C2' U A 18 27.177 -56.086 18.303 1.00 72.55 C
ATOM 12 O2' U A 18 25.813 -55.719 18.317 1.00 71.57 O
ATOM 13 C1' U A 18 27.632 -56.411 16.887 1.00 73.03 C
ATOM 14 N1 U A 18 27.307 -57.796 16.409 1.00 74.52 N
ATOM 15 C2 U A 18 26.242 -57.992 15.541 1.00 74.37 C
ATOM 16 O2 U A 18 25.519 -57.102 15.127 1.00 73.52 O
ATOM 17 N3 U A 18 26.038 -59.295 15.161 1.00 75.76 N
ATOM 18 C4 U A 18 26.773 -60.401 15.549 1.00 77.44 C
ATOM 19 O4 U A 18 26.468 -61.506 15.121 1.00 78.88 O
ATOM 20 C5 U A 18 27.866 -60.124 16.447 1.00 77.77 C
ATOM 21 C6 U A 18 28.087 -58.860 16.833 1.00 76.24 C
ATOM 22 P U A 19 28.129 -52.308 18.694 1.00 65.52 P
ATOM 23 OP1 U A 19 29.588 -52.136 18.528 1.00 65.75 O
ATOM 24 OP2 U A 19 27.514 -52.200 20.035 1.00 66.51 O
ATOM 25 O5' U A 19 27.365 -51.288 17.736 1.00 63.48 O
TER

ATOM 1 O3' C B 15 25.048 -62.604 23.276 1.00 88.58 O
ATOM 2 P G B 16 26.385 -62.146 22.521 1.00 88.93 P
ATOM 3 OP1 G B 16 27.526 -62.839 23.159 1.00 91.20 O
ATOM 4 OP2 G B 16 26.401 -60.668 22.443 1.00 86.82 O
ATOM 5 O5' G B 16 26.182 -62.716 21.037 1.00 89.34 O
ATOM 6 C5' G B 16 26.110 -64.126 20.811 1.00 92.07 C
ATOM 7 C4' G B 16 25.792 -64.465 19.366 1.00 92.33 C
ATOM 8 O4' G B 16 24.491 -63.954 18.979 1.00 91.52 O
ATOM 9 C3' G B 16 26.724 -63.867 18.326 1.00 91.56 C
ATOM 10 O3' G B 16 27.958 -64.575 18.287 1.00 93.27 O
ATOM 11 C2' G B 16 25.888 -64.041 17.063 1.00 91.41 C
ATOM 12 O2' G B 16 25.919 -65.353 16.539 1.00 93.54 O
ATOM 13 C1' G B 16 24.488 -63.715 17.578 1.00 90.97 C
ATOM 14 N9 G B 16 24.100 -62.329 17.296 1.00 89.14 N
ATOM 15 C8 G B 16 24.266 -61.233 18.112 1.00 88.17 C
ATOM 16 N7 G B 16 23.829 -60.120 17.593 1.00 86.47 N
ATOM 17 C5 G B 16 23.344 -60.494 16.347 1.00 86.29 C
ATOM 18 C6 G B 16 22.747 -59.710 15.325 1.00 84.76 C
ATOM 19 O6 G B 16 22.523 -58.492 15.324 1.00 82.90 O
ATOM 20 N1 G B 16 22.396 -60.477 14.213 1.00 85.59 N
ATOM 21 C2 G B 16 22.599 -61.835 14.106 1.00 87.41 C
ATOM 22 N2 G B 16 22.198 -62.407 12.964 1.00 88.05 N
ATOM 23 N3 G B 16 23.160 -62.580 15.055 1.00 88.71 N
ATOM 24 C4 G B 16 23.505 -61.850 16.147 1.00 88.01 C
ATOM 25 P U B 17 29.310 -63.836 17.848 1.00 92.82 P
ATOM 26 OP1 U B 17 29.199 -63.534 16.403 1.00 91.83 O
ATOM 27 OP2 U B 17 30.455 -64.638 18.341 1.00 94.55 O
ATOM 28 O5' U B 17 29.259 -62.441 18.633 1.00 91.20 O
TER

Atoms:
C4: (26.773,-60.401,15.549)
N3: (26.038,-59.295,15.161)
OP1: (31.157,-56.722,21.514)
OP2: (28.901,-57.946,21.449)
C2: (26.242,-57.992,15.541)
C1': (27.632,-56.411,16.887)
C3': (28.113,-54.924,18.633)
O5': (30.040,-57.211,19.339)
O4': (29.038,-56.239,16.893)
C5': (30.463,-55.929,18.875)
P: (30.233,-57.676,20.859)
C4': (29.417,-55.320,17.953)
C2': (27.177,-56.086,18.303)
O2': (25.813,-55.719,18.317)
N1: (27.307,-57.796,16.409)
O4: (26.468,-61.506,15.121)
O2: (25.519,-57.102,15.127)
C6: (28.087,-58.860,16.833)
C5: (27.866,-60.124,16.447)
O3': (27.681,-53.704,18.062)
OP1: (27.526,-62.839,23.159)
OP2: (26.401,-60.668,22.443)
C3': (26.724,-63.867,18.326)
C1': (24.488,-63.715,17.578)
C5': (26.110,-64.126,20.811)
O6: (22.523,-58.492,15.324)
O4': (24.491,-63.954,18.979)
C8: (24.266,-61.233,18.112)
C2: (22.599,-61.835,14.106)
C6: (22.747,-59.710,15.325)
C5: (23.344,-60.494,16.347)
C4: (23.505,-61.850,16.147)
P: (26.385,-62.146,22.521)
C4': (25.792,-64.465,19.366)
C2': (25.888,-64.041,17.063)
O2': (25.919,-65.353,16.539)
N1: (22.396,-60.477,14.213)
N2: (22.198,-62.407,12.964)
N3: (23.160,-62.580,15.055)
N7: (23.829,-60.120,17.593)
N9: (24.100,-62.329,17.296)
O5': (26.182,-62.716,21.037)
O3': (27.958,-64.575,18.287)
Image (generated by PyMOL):
PyMOL image
show in jmol