Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A682:A464
Extra
PDB:
ATOM 1 O3' G A 681 -49.204 -47.912 42.517 1.00 0.01 O
ATOM 2 P U A 682 -48.170 -47.092 41.630 1.00 0.01 P
ATOM 3 OP1 U A 682 -46.871 -47.201 42.276 1.00 0.01 O
ATOM 4 OP2 U A 682 -48.750 -45.751 41.418 1.00 0.01 O
ATOM 5 O5' U A 682 -48.160 -47.881 40.269 1.00 0.01 O
ATOM 6 C5' U A 682 -47.678 -49.202 40.164 1.00 0.01 C
ATOM 7 C4' U A 682 -47.510 -49.575 38.715 1.00 0.01 C
ATOM 8 O4' U A 682 -48.814 -49.762 38.116 1.00 0.01 O
ATOM 9 C3' U A 682 -46.844 -48.519 37.856 1.00 0.01 C
ATOM 10 O3' U A 682 -45.460 -48.641 37.828 1.00 0.01 O
ATOM 11 C2' U A 682 -47.461 -48.712 36.496 1.00 0.01 C
ATOM 12 O2' U A 682 -46.784 -49.738 35.795 1.00 0.01 O
ATOM 13 C1' U A 682 -48.855 -49.193 36.840 1.00 0.01 C
ATOM 14 N1 U A 682 -49.850 -48.112 36.839 1.00 0.01 N
ATOM 15 C2 U A 682 -50.368 -47.801 35.656 1.00 0.01 C
ATOM 16 O2 U A 682 -49.942 -48.350 34.688 1.00 0.01 O
ATOM 17 N3 U A 682 -51.332 -46.846 35.622 1.00 0.01 N
ATOM 18 C4 U A 682 -51.848 -46.169 36.679 1.00 0.01 C
ATOM 19 O4 U A 682 -52.711 -45.317 36.510 1.00 0.01 O
ATOM 20 C5 U A 682 -51.280 -46.551 37.908 1.00 0.01 C
ATOM 21 C6 U A 682 -50.335 -47.487 37.930 1.00 0.01 C
ATOM 22 P G A 683 -44.610 -47.538 37.078 1.00 0.01 P
ATOM 23 OP1 G A 683 -43.233 -47.970 37.103 1.00 0.01 O
ATOM 24 OP2 G A 683 -44.946 -46.249 37.665 1.00 0.01 O
ATOM 25 O5' G A 683 -45.157 -47.592 35.605 1.00 0.01 O
TER
ATOM 1 O3' U B 463 -40.087 -53.248 30.983 1.00 0.01 O
ATOM 2 P G B 464 -40.607 -54.408 31.930 1.00 0.01 P
ATOM 3 OP1 G B 464 -39.437 -54.920 32.643 1.00 0.01 O
ATOM 4 OP2 G B 464 -41.385 -55.331 31.110 1.00 0.01 O
ATOM 5 O5' G B 464 -41.569 -53.620 32.919 1.00 0.01 O
ATOM 6 C5' G B 464 -41.042 -52.875 34.006 1.00 0.01 C
ATOM 7 C4' G B 464 -42.131 -52.203 34.801 1.00 0.01 C
ATOM 8 O4' G B 464 -42.919 -51.413 33.918 1.00 0.01 O
ATOM 9 C3' G B 464 -43.127 -53.118 35.483 1.00 0.01 C
ATOM 10 O3' G B 464 -42.703 -53.508 36.764 1.00 0.01 O
ATOM 11 C2' G B 464 -44.389 -52.296 35.516 1.00 0.01 C
ATOM 12 O2' G B 464 -44.333 -51.366 36.581 1.00 0.01 O
ATOM 13 C1' G B 464 -44.278 -51.521 34.232 1.00 0.01 C
ATOM 14 N9 G B 464 -44.967 -52.129 33.076 1.00 0.01 N
ATOM 15 C8 G B 464 -44.501 -53.059 32.192 1.00 0.01 C
ATOM 16 N7 G B 464 -45.306 -53.268 31.183 1.00 0.01 N
ATOM 17 C5 G B 464 -46.339 -52.383 31.388 1.00 0.01 C
ATOM 18 C6 G B 464 -47.518 -52.127 30.635 1.00 0.01 C
ATOM 19 O6 G B 464 -47.896 -52.669 29.589 1.00 0.01 O
ATOM 20 N1 G B 464 -48.310 -51.127 31.181 1.00 0.01 N
ATOM 21 C2 G B 464 -47.977 -50.468 32.327 1.00 0.01 C
ATOM 22 N2 G B 464 -48.812 -49.511 32.745 1.00 0.01 N
ATOM 23 N3 G B 464 -46.882 -50.702 33.036 1.00 0.01 N
ATOM 24 C4 G B 464 -46.116 -51.660 32.517 1.00 0.01 C
ATOM 25 P A B 465 -43.192 -54.884 37.375 1.00 0.01 P
ATOM 26 OP1 A B 465 -42.381 -55.145 38.559 1.00 0.01 O
ATOM 27 OP2 A B 465 -43.180 -55.853 36.300 1.00 0.01 O
ATOM 28 O5' A B 465 -44.666 -54.556 37.802 1.00 0.01 O
TER
ATOM 2 P U A 682 -48.170 -47.092 41.630 1.00 0.01 P
ATOM 3 OP1 U A 682 -46.871 -47.201 42.276 1.00 0.01 O
ATOM 4 OP2 U A 682 -48.750 -45.751 41.418 1.00 0.01 O
ATOM 5 O5' U A 682 -48.160 -47.881 40.269 1.00 0.01 O
ATOM 6 C5' U A 682 -47.678 -49.202 40.164 1.00 0.01 C
ATOM 7 C4' U A 682 -47.510 -49.575 38.715 1.00 0.01 C
ATOM 8 O4' U A 682 -48.814 -49.762 38.116 1.00 0.01 O
ATOM 9 C3' U A 682 -46.844 -48.519 37.856 1.00 0.01 C
ATOM 10 O3' U A 682 -45.460 -48.641 37.828 1.00 0.01 O
ATOM 11 C2' U A 682 -47.461 -48.712 36.496 1.00 0.01 C
ATOM 12 O2' U A 682 -46.784 -49.738 35.795 1.00 0.01 O
ATOM 13 C1' U A 682 -48.855 -49.193 36.840 1.00 0.01 C
ATOM 14 N1 U A 682 -49.850 -48.112 36.839 1.00 0.01 N
ATOM 15 C2 U A 682 -50.368 -47.801 35.656 1.00 0.01 C
ATOM 16 O2 U A 682 -49.942 -48.350 34.688 1.00 0.01 O
ATOM 17 N3 U A 682 -51.332 -46.846 35.622 1.00 0.01 N
ATOM 18 C4 U A 682 -51.848 -46.169 36.679 1.00 0.01 C
ATOM 19 O4 U A 682 -52.711 -45.317 36.510 1.00 0.01 O
ATOM 20 C5 U A 682 -51.280 -46.551 37.908 1.00 0.01 C
ATOM 21 C6 U A 682 -50.335 -47.487 37.930 1.00 0.01 C
ATOM 22 P G A 683 -44.610 -47.538 37.078 1.00 0.01 P
ATOM 23 OP1 G A 683 -43.233 -47.970 37.103 1.00 0.01 O
ATOM 24 OP2 G A 683 -44.946 -46.249 37.665 1.00 0.01 O
ATOM 25 O5' G A 683 -45.157 -47.592 35.605 1.00 0.01 O
TER
ATOM 1 O3' U B 463 -40.087 -53.248 30.983 1.00 0.01 O
ATOM 2 P G B 464 -40.607 -54.408 31.930 1.00 0.01 P
ATOM 3 OP1 G B 464 -39.437 -54.920 32.643 1.00 0.01 O
ATOM 4 OP2 G B 464 -41.385 -55.331 31.110 1.00 0.01 O
ATOM 5 O5' G B 464 -41.569 -53.620 32.919 1.00 0.01 O
ATOM 6 C5' G B 464 -41.042 -52.875 34.006 1.00 0.01 C
ATOM 7 C4' G B 464 -42.131 -52.203 34.801 1.00 0.01 C
ATOM 8 O4' G B 464 -42.919 -51.413 33.918 1.00 0.01 O
ATOM 9 C3' G B 464 -43.127 -53.118 35.483 1.00 0.01 C
ATOM 10 O3' G B 464 -42.703 -53.508 36.764 1.00 0.01 O
ATOM 11 C2' G B 464 -44.389 -52.296 35.516 1.00 0.01 C
ATOM 12 O2' G B 464 -44.333 -51.366 36.581 1.00 0.01 O
ATOM 13 C1' G B 464 -44.278 -51.521 34.232 1.00 0.01 C
ATOM 14 N9 G B 464 -44.967 -52.129 33.076 1.00 0.01 N
ATOM 15 C8 G B 464 -44.501 -53.059 32.192 1.00 0.01 C
ATOM 16 N7 G B 464 -45.306 -53.268 31.183 1.00 0.01 N
ATOM 17 C5 G B 464 -46.339 -52.383 31.388 1.00 0.01 C
ATOM 18 C6 G B 464 -47.518 -52.127 30.635 1.00 0.01 C
ATOM 19 O6 G B 464 -47.896 -52.669 29.589 1.00 0.01 O
ATOM 20 N1 G B 464 -48.310 -51.127 31.181 1.00 0.01 N
ATOM 21 C2 G B 464 -47.977 -50.468 32.327 1.00 0.01 C
ATOM 22 N2 G B 464 -48.812 -49.511 32.745 1.00 0.01 N
ATOM 23 N3 G B 464 -46.882 -50.702 33.036 1.00 0.01 N
ATOM 24 C4 G B 464 -46.116 -51.660 32.517 1.00 0.01 C
ATOM 25 P A B 465 -43.192 -54.884 37.375 1.00 0.01 P
ATOM 26 OP1 A B 465 -42.381 -55.145 38.559 1.00 0.01 O
ATOM 27 OP2 A B 465 -43.180 -55.853 36.300 1.00 0.01 O
ATOM 28 O5' A B 465 -44.666 -54.556 37.802 1.00 0.01 O
TER
Atoms:
C4: (-51.848,-46.169,36.679)
N3: (-51.332,-46.846,35.622)
OP1: (-46.871,-47.201,42.276)
OP2: (-48.750,-45.751,41.418)
C2: (-50.368,-47.801,35.656)
C1': (-48.855,-49.193,36.840)
C3': (-46.844,-48.519,37.856)
O5': (-48.160,-47.881,40.269)
O4': (-48.814,-49.762,38.116)
C5': (-47.678,-49.202,40.164)
P: (-48.170,-47.092,41.630)
C4': (-47.510,-49.575,38.715)
C2': (-47.461,-48.712,36.496)
O2': (-46.784,-49.738,35.795)
N1: (-49.850,-48.112,36.839)
O4: (-52.711,-45.317,36.510)
O2: (-49.942,-48.350,34.688)
C6: (-50.335,-47.487,37.930)
C5: (-51.280,-46.551,37.908)
O3': (-45.460,-48.641,37.828)
N3: (-51.332,-46.846,35.622)
OP1: (-46.871,-47.201,42.276)
OP2: (-48.750,-45.751,41.418)
C2: (-50.368,-47.801,35.656)
C1': (-48.855,-49.193,36.840)
C3': (-46.844,-48.519,37.856)
O5': (-48.160,-47.881,40.269)
O4': (-48.814,-49.762,38.116)
C5': (-47.678,-49.202,40.164)
P: (-48.170,-47.092,41.630)
C4': (-47.510,-49.575,38.715)
C2': (-47.461,-48.712,36.496)
O2': (-46.784,-49.738,35.795)
N1: (-49.850,-48.112,36.839)
O4: (-52.711,-45.317,36.510)
O2: (-49.942,-48.350,34.688)
C6: (-50.335,-47.487,37.930)
C5: (-51.280,-46.551,37.908)
O3': (-45.460,-48.641,37.828)
OP1: (-39.437,-54.920,32.643)
OP2: (-41.385,-55.331,31.110)
C3': (-43.127,-53.118,35.483)
C1': (-44.278,-51.521,34.232)
C5': (-41.042,-52.875,34.006)
O6: (-47.896,-52.669,29.589)
O4': (-42.919,-51.413,33.918)
C8: (-44.501,-53.059,32.192)
C2: (-47.977,-50.468,32.327)
C6: (-47.518,-52.127,30.635)
C5: (-46.339,-52.383,31.388)
C4: (-46.116,-51.660,32.517)
P: (-40.607,-54.408,31.930)
C4': (-42.131,-52.203,34.801)
C2': (-44.389,-52.296,35.516)
O2': (-44.333,-51.366,36.581)
N1: (-48.310,-51.127,31.181)
N2: (-48.812,-49.511,32.745)
N3: (-46.882,-50.702,33.036)
N7: (-45.306,-53.268,31.183)
N9: (-44.967,-52.129,33.076)
O5': (-41.569,-53.620,32.919)
O3': (-42.703,-53.508,36.764)
OP2: (-41.385,-55.331,31.110)
C3': (-43.127,-53.118,35.483)
C1': (-44.278,-51.521,34.232)
C5': (-41.042,-52.875,34.006)
O6: (-47.896,-52.669,29.589)
O4': (-42.919,-51.413,33.918)
C8: (-44.501,-53.059,32.192)
C2: (-47.977,-50.468,32.327)
C6: (-47.518,-52.127,30.635)
C5: (-46.339,-52.383,31.388)
C4: (-46.116,-51.660,32.517)
P: (-40.607,-54.408,31.930)
C4': (-42.131,-52.203,34.801)
C2': (-44.389,-52.296,35.516)
O2': (-44.333,-51.366,36.581)
N1: (-48.310,-51.127,31.181)
N2: (-48.812,-49.511,32.745)
N3: (-46.882,-50.702,33.036)
N7: (-45.306,-53.268,31.183)
N9: (-44.967,-52.129,33.076)
O5': (-41.569,-53.620,32.919)
O3': (-42.703,-53.508,36.764)
Image (generated by PyMOL):