Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A389:A387
Extra
PDB:
ATOM 1 O3' G A 388 -94.861 -38.257 65.997 1.00 6.01 O
ATOM 2 P U A 389 -93.277 -38.319 65.781 1.00 10.44 P
ATOM 3 OP1 U A 389 -92.702 -37.091 66.400 1.00 10.44 O
ATOM 4 OP2 U A 389 -93.047 -38.555 64.335 1.00 10.44 O
ATOM 5 O5' U A 389 -92.849 -39.591 66.625 1.00 10.44 O
ATOM 6 C5' U A 389 -92.564 -39.456 67.995 1.00 10.44 C
ATOM 7 C4' U A 389 -91.489 -40.394 68.445 1.00 10.44 C
ATOM 8 O4' U A 389 -91.840 -41.734 68.061 1.00 10.44 O
ATOM 9 C3' U A 389 -90.094 -40.138 67.890 1.00 10.44 C
ATOM 10 O3' U A 389 -89.139 -40.445 68.898 1.00 10.44 O
ATOM 11 C2' U A 389 -89.961 -41.171 66.797 1.00 10.44 C
ATOM 12 O2' U A 389 -88.621 -41.555 66.555 1.00 10.44 O
ATOM 13 C1' U A 389 -90.775 -42.326 67.374 1.00 10.44 C
ATOM 14 N1 U A 389 -91.347 -43.236 66.369 1.00 11.04 N
ATOM 15 C2 U A 389 -90.835 -44.497 66.226 1.00 11.04 C
ATOM 16 O2 U A 389 -89.908 -44.876 66.867 1.00 11.04 O
ATOM 17 N3 U A 389 -91.430 -45.289 65.286 1.00 11.04 N
ATOM 18 C4 U A 389 -92.513 -44.944 64.497 1.00 11.04 C
ATOM 19 O4 U A 389 -92.976 -45.735 63.667 1.00 11.04 O
ATOM 20 C5 U A 389 -93.006 -43.624 64.721 1.00 11.04 C
ATOM 21 C6 U A 389 -92.422 -42.839 65.627 1.00 11.04 C
ATOM 22 P A A 390 -87.964 -39.426 69.260 1.00 0.01 P
ATOM 23 OP1 A A 390 -88.522 -38.068 69.145 1.00 0.01 O
ATOM 24 OP2 A A 390 -86.805 -39.804 68.419 1.00 0.01 O
ATOM 25 O5' A A 390 -87.661 -39.765 70.784 1.00 0.01 O
TER
ATOM 1 O3' U B 386 -91.073 -38.147 58.633 1.00 1.03 O
ATOM 2 P G B 387 -92.248 -38.146 57.556 1.00 5.00 P
ATOM 3 OP1 G B 387 -91.728 -38.820 56.354 1.00 5.00 O
ATOM 4 OP2 G B 387 -92.720 -36.752 57.467 1.00 5.00 O
ATOM 5 O5' G B 387 -93.374 -39.037 58.204 1.00 5.00 O
ATOM 6 C5' G B 387 -93.667 -38.969 59.579 1.00 5.00 C
ATOM 7 C4' G B 387 -93.821 -40.346 60.128 1.00 5.00 C
ATOM 8 O4' G B 387 -92.536 -40.950 60.280 1.00 5.00 O
ATOM 9 C3' G B 387 -94.457 -40.466 61.478 1.00 5.00 C
ATOM 10 O3' G B 387 -95.874 -40.433 61.389 1.00 5.00 O
ATOM 11 C2' G B 387 -93.911 -41.802 61.995 1.00 5.00 C
ATOM 12 O2' G B 387 -94.753 -42.873 61.610 1.00 5.00 O
ATOM 13 C1' G B 387 -92.595 -41.948 61.242 1.00 5.00 C
ATOM 14 N9 G B 387 -91.423 -41.820 62.096 1.00 5.19 N
ATOM 15 C8 G B 387 -91.173 -40.887 63.048 1.00 5.19 C
ATOM 16 N7 G B 387 -90.001 -41.034 63.596 1.00 5.19 N
ATOM 17 C5 G B 387 -89.460 -42.114 62.937 1.00 5.19 C
ATOM 18 C6 G B 387 -88.216 -42.736 63.101 1.00 5.19 C
ATOM 19 O6 G B 387 -87.313 -42.431 63.894 1.00 5.19 O
ATOM 20 N1 G B 387 -88.065 -43.810 62.235 1.00 5.19 N
ATOM 21 C2 G B 387 -88.981 -44.225 61.321 1.00 5.19 C
ATOM 22 N2 G B 387 -88.625 -45.286 60.575 1.00 5.19 N
ATOM 23 N3 G B 387 -90.152 -43.642 61.177 1.00 5.19 N
ATOM 24 C4 G B 387 -90.317 -42.606 62.006 1.00 5.19 C
ATOM 25 P G B 388 -96.680 -39.106 61.794 1.00 6.01 P
ATOM 26 OP1 G B 388 -98.110 -39.322 61.438 1.00 6.01 O
ATOM 27 OP2 G B 388 -95.962 -37.961 61.198 1.00 6.01 O
ATOM 28 O5' G B 388 -96.503 -39.091 63.371 1.00 6.01 O
TER
ATOM 2 P U A 389 -93.277 -38.319 65.781 1.00 10.44 P
ATOM 3 OP1 U A 389 -92.702 -37.091 66.400 1.00 10.44 O
ATOM 4 OP2 U A 389 -93.047 -38.555 64.335 1.00 10.44 O
ATOM 5 O5' U A 389 -92.849 -39.591 66.625 1.00 10.44 O
ATOM 6 C5' U A 389 -92.564 -39.456 67.995 1.00 10.44 C
ATOM 7 C4' U A 389 -91.489 -40.394 68.445 1.00 10.44 C
ATOM 8 O4' U A 389 -91.840 -41.734 68.061 1.00 10.44 O
ATOM 9 C3' U A 389 -90.094 -40.138 67.890 1.00 10.44 C
ATOM 10 O3' U A 389 -89.139 -40.445 68.898 1.00 10.44 O
ATOM 11 C2' U A 389 -89.961 -41.171 66.797 1.00 10.44 C
ATOM 12 O2' U A 389 -88.621 -41.555 66.555 1.00 10.44 O
ATOM 13 C1' U A 389 -90.775 -42.326 67.374 1.00 10.44 C
ATOM 14 N1 U A 389 -91.347 -43.236 66.369 1.00 11.04 N
ATOM 15 C2 U A 389 -90.835 -44.497 66.226 1.00 11.04 C
ATOM 16 O2 U A 389 -89.908 -44.876 66.867 1.00 11.04 O
ATOM 17 N3 U A 389 -91.430 -45.289 65.286 1.00 11.04 N
ATOM 18 C4 U A 389 -92.513 -44.944 64.497 1.00 11.04 C
ATOM 19 O4 U A 389 -92.976 -45.735 63.667 1.00 11.04 O
ATOM 20 C5 U A 389 -93.006 -43.624 64.721 1.00 11.04 C
ATOM 21 C6 U A 389 -92.422 -42.839 65.627 1.00 11.04 C
ATOM 22 P A A 390 -87.964 -39.426 69.260 1.00 0.01 P
ATOM 23 OP1 A A 390 -88.522 -38.068 69.145 1.00 0.01 O
ATOM 24 OP2 A A 390 -86.805 -39.804 68.419 1.00 0.01 O
ATOM 25 O5' A A 390 -87.661 -39.765 70.784 1.00 0.01 O
TER
ATOM 1 O3' U B 386 -91.073 -38.147 58.633 1.00 1.03 O
ATOM 2 P G B 387 -92.248 -38.146 57.556 1.00 5.00 P
ATOM 3 OP1 G B 387 -91.728 -38.820 56.354 1.00 5.00 O
ATOM 4 OP2 G B 387 -92.720 -36.752 57.467 1.00 5.00 O
ATOM 5 O5' G B 387 -93.374 -39.037 58.204 1.00 5.00 O
ATOM 6 C5' G B 387 -93.667 -38.969 59.579 1.00 5.00 C
ATOM 7 C4' G B 387 -93.821 -40.346 60.128 1.00 5.00 C
ATOM 8 O4' G B 387 -92.536 -40.950 60.280 1.00 5.00 O
ATOM 9 C3' G B 387 -94.457 -40.466 61.478 1.00 5.00 C
ATOM 10 O3' G B 387 -95.874 -40.433 61.389 1.00 5.00 O
ATOM 11 C2' G B 387 -93.911 -41.802 61.995 1.00 5.00 C
ATOM 12 O2' G B 387 -94.753 -42.873 61.610 1.00 5.00 O
ATOM 13 C1' G B 387 -92.595 -41.948 61.242 1.00 5.00 C
ATOM 14 N9 G B 387 -91.423 -41.820 62.096 1.00 5.19 N
ATOM 15 C8 G B 387 -91.173 -40.887 63.048 1.00 5.19 C
ATOM 16 N7 G B 387 -90.001 -41.034 63.596 1.00 5.19 N
ATOM 17 C5 G B 387 -89.460 -42.114 62.937 1.00 5.19 C
ATOM 18 C6 G B 387 -88.216 -42.736 63.101 1.00 5.19 C
ATOM 19 O6 G B 387 -87.313 -42.431 63.894 1.00 5.19 O
ATOM 20 N1 G B 387 -88.065 -43.810 62.235 1.00 5.19 N
ATOM 21 C2 G B 387 -88.981 -44.225 61.321 1.00 5.19 C
ATOM 22 N2 G B 387 -88.625 -45.286 60.575 1.00 5.19 N
ATOM 23 N3 G B 387 -90.152 -43.642 61.177 1.00 5.19 N
ATOM 24 C4 G B 387 -90.317 -42.606 62.006 1.00 5.19 C
ATOM 25 P G B 388 -96.680 -39.106 61.794 1.00 6.01 P
ATOM 26 OP1 G B 388 -98.110 -39.322 61.438 1.00 6.01 O
ATOM 27 OP2 G B 388 -95.962 -37.961 61.198 1.00 6.01 O
ATOM 28 O5' G B 388 -96.503 -39.091 63.371 1.00 6.01 O
TER
Atoms:
C4: (-92.513,-44.944,64.497)
N3: (-91.430,-45.289,65.286)
OP1: (-92.702,-37.091,66.400)
OP2: (-93.047,-38.555,64.335)
C2: (-90.835,-44.497,66.226)
C1': (-90.775,-42.326,67.374)
C3': (-90.094,-40.138,67.890)
O5': (-92.849,-39.591,66.625)
O4': (-91.840,-41.734,68.061)
C5': (-92.564,-39.456,67.995)
P: (-93.277,-38.319,65.781)
C4': (-91.489,-40.394,68.445)
C2': (-89.961,-41.171,66.797)
O2': (-88.621,-41.555,66.555)
N1: (-91.347,-43.236,66.369)
O4: (-92.976,-45.735,63.667)
O2: (-89.908,-44.876,66.867)
C6: (-92.422,-42.839,65.627)
C5: (-93.006,-43.624,64.721)
O3': (-89.139,-40.445,68.898)
N3: (-91.430,-45.289,65.286)
OP1: (-92.702,-37.091,66.400)
OP2: (-93.047,-38.555,64.335)
C2: (-90.835,-44.497,66.226)
C1': (-90.775,-42.326,67.374)
C3': (-90.094,-40.138,67.890)
O5': (-92.849,-39.591,66.625)
O4': (-91.840,-41.734,68.061)
C5': (-92.564,-39.456,67.995)
P: (-93.277,-38.319,65.781)
C4': (-91.489,-40.394,68.445)
C2': (-89.961,-41.171,66.797)
O2': (-88.621,-41.555,66.555)
N1: (-91.347,-43.236,66.369)
O4: (-92.976,-45.735,63.667)
O2: (-89.908,-44.876,66.867)
C6: (-92.422,-42.839,65.627)
C5: (-93.006,-43.624,64.721)
O3': (-89.139,-40.445,68.898)
OP1: (-91.728,-38.820,56.354)
OP2: (-92.720,-36.752,57.467)
C3': (-94.457,-40.466,61.478)
C1': (-92.595,-41.948,61.242)
C5': (-93.667,-38.969,59.579)
O6: (-87.313,-42.431,63.894)
O4': (-92.536,-40.950,60.280)
C8: (-91.173,-40.887,63.048)
C2: (-88.981,-44.225,61.321)
C6: (-88.216,-42.736,63.101)
C5: (-89.460,-42.114,62.937)
C4: (-90.317,-42.606,62.006)
P: (-92.248,-38.146,57.556)
C4': (-93.821,-40.346,60.128)
C2': (-93.911,-41.802,61.995)
O2': (-94.753,-42.873,61.610)
N1: (-88.065,-43.810,62.235)
N2: (-88.625,-45.286,60.575)
N3: (-90.152,-43.642,61.177)
N7: (-90.001,-41.034,63.596)
N9: (-91.423,-41.820,62.096)
O5': (-93.374,-39.037,58.204)
O3': (-95.874,-40.433,61.389)
OP2: (-92.720,-36.752,57.467)
C3': (-94.457,-40.466,61.478)
C1': (-92.595,-41.948,61.242)
C5': (-93.667,-38.969,59.579)
O6: (-87.313,-42.431,63.894)
O4': (-92.536,-40.950,60.280)
C8: (-91.173,-40.887,63.048)
C2: (-88.981,-44.225,61.321)
C6: (-88.216,-42.736,63.101)
C5: (-89.460,-42.114,62.937)
C4: (-90.317,-42.606,62.006)
P: (-92.248,-38.146,57.556)
C4': (-93.821,-40.346,60.128)
C2': (-93.911,-41.802,61.995)
O2': (-94.753,-42.873,61.610)
N1: (-88.065,-43.810,62.235)
N2: (-88.625,-45.286,60.575)
N3: (-90.152,-43.642,61.177)
N7: (-90.001,-41.034,63.596)
N9: (-91.423,-41.820,62.096)
O5': (-93.374,-39.037,58.204)
O3': (-95.874,-40.433,61.389)
Image (generated by PyMOL):