ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2R22:B5:B6

Extra

PDB:
ATOM 1 O3' U A 4 -14.337 -2.687 6.732 1.00 9.77 O
ATOM 2 P U A 5 -13.072 -2.345 7.663 1.00 10.03 P
ATOM 3 OP1 U A 5 -13.592 -2.024 9.013 1.00 11.14 O
ATOM 4 OP2 U A 5 -12.196 -1.373 6.965 1.00 11.01 O
ATOM 5 O5' U A 5 -12.290 -3.724 7.755 1.00 11.16 O
ATOM 6 C5' U A 5 -12.813 -4.789 8.531 1.00 10.79 C
ATOM 7 C4' U A 5 -11.754 -5.832 8.752 1.00 11.06 C
ATOM 8 O4' U A 5 -11.476 -6.533 7.512 1.00 8.89 O
ATOM 9 C3' U A 5 -10.396 -5.297 9.151 1.00 10.27 C
ATOM 10 O3' U A 5 -10.394 -4.917 10.518 1.00 12.15 O
ATOM 11 C2' U A 5 -9.509 -6.492 8.829 1.00 10.37 C
ATOM 12 O2' U A 5 -9.665 -7.539 9.768 1.00 11.08 O
ATOM 13 C1' U A 5 -10.112 -6.938 7.495 1.00 8.83 C
ATOM 14 N1 U A 5 -9.466 -6.314 6.330 1.00 8.12 N
ATOM 15 C2 U A 5 -8.345 -6.931 5.809 1.00 9.13 C
ATOM 16 O2 U A 5 -7.864 -7.942 6.294 1.00 10.23 O
ATOM 17 N3 U A 5 -7.808 -6.318 4.702 1.00 8.38 N
ATOM 18 C4 U A 5 -8.267 -5.169 4.084 1.00 10.31 C
ATOM 19 O4 U A 5 -7.712 -4.765 3.060 1.00 10.10 O
ATOM 20 C5 U A 5 -9.416 -4.581 4.699 1.00 10.00 C
ATOM 21 C6 U A 5 -9.963 -5.158 5.772 1.00 8.50 C
ATOM 22 P G A 6 -9.165 -4.071 11.106 1.00 12.22 P
ATOM 23 OP1 G A 6 -9.619 -3.534 12.416 1.00 14.75 O
ATOM 24 OP2 G A 6 -8.646 -3.140 10.072 1.00 11.71 O
ATOM 25 O5' G A 6 -8.096 -5.204 11.395 1.00 12.98 O
TER

ATOM 1 O3' U B 5 -10.394 -4.917 10.518 1.00 12.15 O
ATOM 2 P G B 6 -9.165 -4.071 11.106 1.00 12.22 P
ATOM 3 OP1 G B 6 -9.619 -3.534 12.416 1.00 14.75 O
ATOM 4 OP2 G B 6 -8.646 -3.140 10.072 1.00 11.71 O
ATOM 5 O5' G B 6 -8.096 -5.204 11.395 1.00 12.98 O
ATOM 6 C5' G B 6 -6.724 -5.005 11.161 1.00 13.73 C
ATOM 7 C4' G B 6 -6.047 -6.341 11.076 1.00 13.91 C
ATOM 8 O4' G B 6 -6.446 -7.001 9.844 1.00 13.16 O
ATOM 9 C3' G B 6 -4.540 -6.294 10.991 1.00 14.57 C
ATOM 10 O3' G B 6 -4.002 -6.146 12.295 1.00 16.54 O
ATOM 11 C2' G B 6 -4.233 -7.647 10.367 1.00 14.86 C
ATOM 12 O2' G B 6 -4.341 -8.712 11.290 1.00 15.67 O
ATOM 13 C1' G B 6 -5.353 -7.741 9.329 1.00 13.37 C
ATOM 14 N9 G B 6 -4.928 -7.140 8.068 1.00 13.22 N
ATOM 15 C8 G B 6 -3.967 -7.648 7.230 1.00 12.50 C
ATOM 16 N7 G B 6 -3.759 -6.910 6.177 1.00 10.95 N
ATOM 17 C5 G B 6 -4.639 -5.847 6.318 1.00 10.49 C
ATOM 18 C6 G B 6 -4.855 -4.728 5.480 1.00 10.34 C
ATOM 19 O6 G B 6 -4.296 -4.449 4.414 1.00 10.42 O
ATOM 20 N1 G B 6 -5.834 -3.884 5.993 1.00 11.12 N
ATOM 21 C2 G B 6 -6.518 -4.092 7.163 1.00 11.34 C
ATOM 22 N2 G B 6 -7.423 -3.150 7.486 1.00 12.05 N
ATOM 23 N3 G B 6 -6.331 -5.140 7.956 1.00 10.90 N
ATOM 24 C4 G B 6 -5.378 -5.972 7.476 1.00 10.78 C
ATOM 25 P A B 7 -2.728 -5.203 12.515 1.00 16.73 P
ATOM 26 OP1 A B 7 -2.341 -5.296 13.948 1.00 18.95 O
ATOM 27 OP2 A B 7 -2.996 -3.876 11.908 1.00 17.82 O
ATOM 28 O5' A B 7 -1.591 -5.902 11.650 1.00 14.02 O
TER

Atoms:
C4: (-8.267,-5.169,4.084)
N3: (-7.808,-6.318,4.702)
OP1: (-13.592,-2.024,9.013)
OP2: (-12.196,-1.373,6.965)
C2: (-8.345,-6.931,5.809)
C1': (-10.112,-6.938,7.495)
C3': (-10.396,-5.297,9.151)
O5': (-12.290,-3.724,7.755)
O4': (-11.476,-6.533,7.512)
C5': (-12.813,-4.789,8.531)
P: (-13.072,-2.345,7.663)
C4': (-11.754,-5.832,8.752)
C2': (-9.509,-6.492,8.829)
O2': (-9.665,-7.539,9.768)
N1: (-9.466,-6.314,6.330)
O4: (-7.712,-4.765,3.060)
O2: (-7.864,-7.942,6.294)
C6: (-9.963,-5.158,5.772)
C5: (-9.416,-4.581,4.699)
O3': (-10.394,-4.917,10.518)
OP1: (-9.619,-3.534,12.416)
OP2: (-8.646,-3.140,10.072)
C3': (-4.540,-6.294,10.991)
C1': (-5.353,-7.741,9.329)
C5': (-6.724,-5.005,11.161)
O6: (-4.296,-4.449,4.414)
O4': (-6.446,-7.001,9.844)
C8: (-3.967,-7.648,7.230)
C2: (-6.518,-4.092,7.163)
C6: (-4.855,-4.728,5.480)
C5: (-4.639,-5.847,6.318)
C4: (-5.378,-5.972,7.476)
P: (-9.165,-4.071,11.106)
C4': (-6.047,-6.341,11.076)
C2': (-4.233,-7.647,10.367)
O2': (-4.341,-8.712,11.290)
N1: (-5.834,-3.884,5.993)
N2: (-7.423,-3.150,7.486)
N3: (-6.331,-5.140,7.956)
N7: (-3.759,-6.910,6.177)
N9: (-4.928,-7.140,8.068)
O5': (-8.096,-5.204,11.395)
O3': (-4.002,-6.146,12.295)
Image (generated by PyMOL):
PyMOL image
show in jmol