Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12223:12718
Extra
PDB:
ATOM 1 O3' C A2222 16.610 -11.004 91.115 1.00 35.86 O
ATOM 2 P U A2223 16.181 -12.384 91.832 1.00 38.93 P
ATOM 3 OP1 U A2223 15.309 -12.023 92.896 1.00 39.17 O
ATOM 4 OP2 U A2223 17.425 -13.120 92.143 1.00 38.86 O
ATOM 5 O5' U A2223 15.358 -13.181 90.732 1.00 38.86 O
ATOM 6 C5' U A2223 14.202 -12.644 90.146 1.00 38.90 C
ATOM 7 C4' U A2223 13.702 -13.538 89.065 1.00 38.82 C
ATOM 8 O4' U A2223 14.745 -13.776 88.113 1.00 38.59 O
ATOM 9 C3' U A2223 13.316 -14.922 89.486 1.00 38.94 C
ATOM 10 O3' U A2223 12.047 -14.962 90.048 1.00 39.17 O
ATOM 11 C2' U A2223 13.387 -15.689 88.191 1.00 38.79 C
ATOM 12 O2' U A2223 12.254 -15.371 87.407 1.00 38.83 O
ATOM 13 C1' U A2223 14.583 -15.049 87.534 1.00 38.57 C
ATOM 14 N1 U A2223 15.843 -15.823 87.698 1.00 38.47 N
ATOM 15 C2 U A2223 16.061 -17.043 87.030 1.00 38.41 C
ATOM 16 O2 U A2223 15.217 -17.636 86.352 1.00 38.44 O
ATOM 17 N3 U A2223 17.298 -17.621 87.220 1.00 38.33 N
ATOM 18 C4 U A2223 18.304 -17.083 87.958 1.00 38.30 C
ATOM 19 O4 U A2223 19.374 -17.664 88.007 1.00 38.24 O
ATOM 20 C5 U A2223 18.026 -15.846 88.586 1.00 38.37 C
ATOM 21 C6 U A2223 16.849 -15.265 88.422 1.00 38.44 C
ATOM 22 P U A2224 11.716 -16.070 91.102 1.00 36.85 P
ATOM 23 OP1 U A2224 10.384 -15.787 91.625 1.00 37.08 O
ATOM 24 OP2 U A2224 12.831 -16.092 92.047 1.00 36.85 O
ATOM 25 O5' U A2224 11.652 -17.407 90.216 1.00 36.78 O
TER
ATOM 1 O3' U B2717 3.756 -15.578 85.665 1.00 43.56 O
ATOM 2 P G B2718 4.187 -14.219 84.954 1.00 39.06 P
ATOM 3 OP1 G B2718 3.272 -13.173 85.444 1.00 39.25 O
ATOM 4 OP2 G B2718 4.258 -14.483 83.510 1.00 38.93 O
ATOM 5 O5' G B2718 5.624 -13.961 85.521 1.00 38.89 O
ATOM 6 C5' G B2718 5.812 -13.770 86.901 1.00 39.00 C
ATOM 7 C4' G B2718 7.247 -13.928 87.257 1.00 38.83 C
ATOM 8 O4' G B2718 7.697 -15.216 86.826 1.00 38.74 O
ATOM 9 C3' G B2718 8.201 -12.936 86.617 1.00 38.61 C
ATOM 10 O3' G B2718 8.288 -11.754 87.389 1.00 38.68 O
ATOM 11 C2' G B2718 9.504 -13.706 86.568 1.00 38.44 C
ATOM 12 O2' G B2718 10.170 -13.583 87.805 1.00 38.49 O
ATOM 13 C1' G B2718 9.020 -15.160 86.428 1.00 38.51 C
ATOM 14 N9 G B2718 9.063 -15.670 85.059 1.00 38.38 N
ATOM 15 C8 G B2718 8.065 -15.551 84.143 1.00 38.43 C
ATOM 16 N7 G B2718 8.338 -16.156 83.033 1.00 38.31 N
ATOM 17 C5 G B2718 9.566 -16.731 83.254 1.00 38.18 C
ATOM 18 C6 G B2718 10.371 -17.520 82.438 1.00 38.03 C
ATOM 19 O6 G B2718 10.182 -17.899 81.311 1.00 37.98 O
ATOM 20 N1 G B2718 11.530 -17.892 83.057 1.00 37.95 N
ATOM 21 C2 G B2718 11.904 -17.547 84.320 1.00 38.00 C
ATOM 22 N2 G B2718 13.081 -17.961 84.773 1.00 37.92 N
ATOM 23 N3 G B2718 11.154 -16.830 85.094 1.00 38.14 N
ATOM 24 C4 G B2718 10.016 -16.457 84.501 1.00 38.22 C
ATOM 25 P A B2719 8.338 -10.305 86.720 1.00 37.54 P
ATOM 26 OP1 A B2719 7.884 -9.348 87.733 1.00 37.73 O
ATOM 27 OP2 A B2719 7.619 -10.360 85.443 1.00 37.51 O
ATOM 28 O5' A B2719 9.902 -10.134 86.457 1.00 37.30 O
TER
ATOM 2 P U A2223 16.181 -12.384 91.832 1.00 38.93 P
ATOM 3 OP1 U A2223 15.309 -12.023 92.896 1.00 39.17 O
ATOM 4 OP2 U A2223 17.425 -13.120 92.143 1.00 38.86 O
ATOM 5 O5' U A2223 15.358 -13.181 90.732 1.00 38.86 O
ATOM 6 C5' U A2223 14.202 -12.644 90.146 1.00 38.90 C
ATOM 7 C4' U A2223 13.702 -13.538 89.065 1.00 38.82 C
ATOM 8 O4' U A2223 14.745 -13.776 88.113 1.00 38.59 O
ATOM 9 C3' U A2223 13.316 -14.922 89.486 1.00 38.94 C
ATOM 10 O3' U A2223 12.047 -14.962 90.048 1.00 39.17 O
ATOM 11 C2' U A2223 13.387 -15.689 88.191 1.00 38.79 C
ATOM 12 O2' U A2223 12.254 -15.371 87.407 1.00 38.83 O
ATOM 13 C1' U A2223 14.583 -15.049 87.534 1.00 38.57 C
ATOM 14 N1 U A2223 15.843 -15.823 87.698 1.00 38.47 N
ATOM 15 C2 U A2223 16.061 -17.043 87.030 1.00 38.41 C
ATOM 16 O2 U A2223 15.217 -17.636 86.352 1.00 38.44 O
ATOM 17 N3 U A2223 17.298 -17.621 87.220 1.00 38.33 N
ATOM 18 C4 U A2223 18.304 -17.083 87.958 1.00 38.30 C
ATOM 19 O4 U A2223 19.374 -17.664 88.007 1.00 38.24 O
ATOM 20 C5 U A2223 18.026 -15.846 88.586 1.00 38.37 C
ATOM 21 C6 U A2223 16.849 -15.265 88.422 1.00 38.44 C
ATOM 22 P U A2224 11.716 -16.070 91.102 1.00 36.85 P
ATOM 23 OP1 U A2224 10.384 -15.787 91.625 1.00 37.08 O
ATOM 24 OP2 U A2224 12.831 -16.092 92.047 1.00 36.85 O
ATOM 25 O5' U A2224 11.652 -17.407 90.216 1.00 36.78 O
TER
ATOM 1 O3' U B2717 3.756 -15.578 85.665 1.00 43.56 O
ATOM 2 P G B2718 4.187 -14.219 84.954 1.00 39.06 P
ATOM 3 OP1 G B2718 3.272 -13.173 85.444 1.00 39.25 O
ATOM 4 OP2 G B2718 4.258 -14.483 83.510 1.00 38.93 O
ATOM 5 O5' G B2718 5.624 -13.961 85.521 1.00 38.89 O
ATOM 6 C5' G B2718 5.812 -13.770 86.901 1.00 39.00 C
ATOM 7 C4' G B2718 7.247 -13.928 87.257 1.00 38.83 C
ATOM 8 O4' G B2718 7.697 -15.216 86.826 1.00 38.74 O
ATOM 9 C3' G B2718 8.201 -12.936 86.617 1.00 38.61 C
ATOM 10 O3' G B2718 8.288 -11.754 87.389 1.00 38.68 O
ATOM 11 C2' G B2718 9.504 -13.706 86.568 1.00 38.44 C
ATOM 12 O2' G B2718 10.170 -13.583 87.805 1.00 38.49 O
ATOM 13 C1' G B2718 9.020 -15.160 86.428 1.00 38.51 C
ATOM 14 N9 G B2718 9.063 -15.670 85.059 1.00 38.38 N
ATOM 15 C8 G B2718 8.065 -15.551 84.143 1.00 38.43 C
ATOM 16 N7 G B2718 8.338 -16.156 83.033 1.00 38.31 N
ATOM 17 C5 G B2718 9.566 -16.731 83.254 1.00 38.18 C
ATOM 18 C6 G B2718 10.371 -17.520 82.438 1.00 38.03 C
ATOM 19 O6 G B2718 10.182 -17.899 81.311 1.00 37.98 O
ATOM 20 N1 G B2718 11.530 -17.892 83.057 1.00 37.95 N
ATOM 21 C2 G B2718 11.904 -17.547 84.320 1.00 38.00 C
ATOM 22 N2 G B2718 13.081 -17.961 84.773 1.00 37.92 N
ATOM 23 N3 G B2718 11.154 -16.830 85.094 1.00 38.14 N
ATOM 24 C4 G B2718 10.016 -16.457 84.501 1.00 38.22 C
ATOM 25 P A B2719 8.338 -10.305 86.720 1.00 37.54 P
ATOM 26 OP1 A B2719 7.884 -9.348 87.733 1.00 37.73 O
ATOM 27 OP2 A B2719 7.619 -10.360 85.443 1.00 37.51 O
ATOM 28 O5' A B2719 9.902 -10.134 86.457 1.00 37.30 O
TER
Atoms:
C4: (18.304,-17.083,87.958)
N3: (17.298,-17.621,87.220)
OP1: (15.309,-12.023,92.896)
OP2: (17.425,-13.120,92.143)
C2: (16.061,-17.043,87.030)
C1': (14.583,-15.049,87.534)
C3': (13.316,-14.922,89.486)
O5': (15.358,-13.181,90.732)
O4': (14.745,-13.776,88.113)
C5': (14.202,-12.644,90.146)
P: (16.181,-12.384,91.832)
C4': (13.702,-13.538,89.065)
C2': (13.387,-15.689,88.191)
O2': (12.254,-15.371,87.407)
N1: (15.843,-15.823,87.698)
O4: (19.374,-17.664,88.007)
O2: (15.217,-17.636,86.352)
C6: (16.849,-15.265,88.422)
C5: (18.026,-15.846,88.586)
O3': (12.047,-14.962,90.048)
N3: (17.298,-17.621,87.220)
OP1: (15.309,-12.023,92.896)
OP2: (17.425,-13.120,92.143)
C2: (16.061,-17.043,87.030)
C1': (14.583,-15.049,87.534)
C3': (13.316,-14.922,89.486)
O5': (15.358,-13.181,90.732)
O4': (14.745,-13.776,88.113)
C5': (14.202,-12.644,90.146)
P: (16.181,-12.384,91.832)
C4': (13.702,-13.538,89.065)
C2': (13.387,-15.689,88.191)
O2': (12.254,-15.371,87.407)
N1: (15.843,-15.823,87.698)
O4: (19.374,-17.664,88.007)
O2: (15.217,-17.636,86.352)
C6: (16.849,-15.265,88.422)
C5: (18.026,-15.846,88.586)
O3': (12.047,-14.962,90.048)
OP1: (3.272,-13.173,85.444)
OP2: (4.258,-14.483,83.510)
C3': (8.201,-12.936,86.617)
C1': (9.020,-15.160,86.428)
C5': (5.812,-13.770,86.901)
O6: (10.182,-17.899,81.311)
O4': (7.697,-15.216,86.826)
C8: (8.065,-15.551,84.143)
C2: (11.904,-17.547,84.320)
C6: (10.371,-17.520,82.438)
C5: (9.566,-16.731,83.254)
C4: (10.016,-16.457,84.501)
P: (4.187,-14.219,84.954)
C4': (7.247,-13.928,87.257)
C2': (9.504,-13.706,86.568)
O2': (10.170,-13.583,87.805)
N1: (11.530,-17.892,83.057)
N2: (13.081,-17.961,84.773)
N3: (11.154,-16.830,85.094)
N7: (8.338,-16.156,83.033)
N9: (9.063,-15.670,85.059)
O5': (5.624,-13.961,85.521)
O3': (8.288,-11.754,87.389)
OP2: (4.258,-14.483,83.510)
C3': (8.201,-12.936,86.617)
C1': (9.020,-15.160,86.428)
C5': (5.812,-13.770,86.901)
O6: (10.182,-17.899,81.311)
O4': (7.697,-15.216,86.826)
C8: (8.065,-15.551,84.143)
C2: (11.904,-17.547,84.320)
C6: (10.371,-17.520,82.438)
C5: (9.566,-16.731,83.254)
C4: (10.016,-16.457,84.501)
P: (4.187,-14.219,84.954)
C4': (7.247,-13.928,87.257)
C2': (9.504,-13.706,86.568)
O2': (10.170,-13.583,87.805)
N1: (11.530,-17.892,83.057)
N2: (13.081,-17.961,84.773)
N3: (11.154,-16.830,85.094)
N7: (8.338,-16.156,83.033)
N9: (9.063,-15.670,85.059)
O5': (5.624,-13.961,85.521)
O3': (8.288,-11.754,87.389)
Image (generated by PyMOL):