Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0536:0592
Extra
PDB:
ATOM 1 O3' A A 535 5.802 139.337 92.110 1.00 57.01 O
ATOM 2 P U A 536 4.401 139.207 91.331 1.00 57.66 P
ATOM 3 OP1 U A 536 3.950 140.593 91.047 1.00 55.95 O
ATOM 4 OP2 U A 536 3.515 138.285 92.093 1.00 56.88 O
ATOM 5 O5' U A 536 4.782 138.516 89.946 1.00 56.61 O
ATOM 6 C5' U A 536 5.782 139.098 89.097 1.00 55.81 C
ATOM 7 C4' U A 536 5.970 138.271 87.848 1.00 56.82 C
ATOM 8 O4' U A 536 6.406 136.934 88.222 1.00 55.60 O
ATOM 9 C3' U A 536 4.749 138.090 86.947 1.00 58.26 C
ATOM 10 O3' U A 536 5.180 138.038 85.585 1.00 62.26 O
ATOM 11 C2' U A 536 4.240 136.715 87.362 1.00 57.07 C
ATOM 12 O2' U A 536 3.499 136.064 86.349 1.00 57.20 O
ATOM 13 C1' U A 536 5.556 135.983 87.620 1.00 55.58 C
ATOM 14 N1 U A 536 5.434 134.813 88.504 1.00 54.28 N
ATOM 15 C2 U A 536 5.693 133.567 87.959 1.00 53.37 C
ATOM 16 O2 U A 536 6.073 133.407 86.815 1.00 53.69 O
ATOM 17 N3 U A 536 5.491 132.511 88.808 1.00 54.33 N
ATOM 18 C4 U A 536 5.072 132.568 90.119 1.00 54.90 C
ATOM 19 O4 U A 536 4.809 131.523 90.715 1.00 56.10 O
ATOM 20 C5 U A 536 4.868 133.890 90.620 1.00 54.54 C
ATOM 21 C6 U A 536 5.053 134.940 89.818 1.00 54.81 C
ATOM 22 P A A 537 4.702 139.169 84.540 1.00 66.20 P
ATOM 23 OP1 A A 537 5.769 139.306 83.510 1.00 65.49 O
ATOM 24 OP2 A A 537 4.263 140.372 85.307 1.00 65.29 O
ATOM 25 O5' A A 537 3.426 138.535 83.825 1.00 65.24 O
TER
ATOM 1 O3' A B 591 -5.647 134.213 88.298 1.00 86.11 O
ATOM 2 P G B 592 -5.018 135.158 89.447 1.00 87.40 P
ATOM 3 OP1 G B 592 -5.961 135.251 90.595 1.00 87.32 O
ATOM 4 OP2 G B 592 -4.575 136.401 88.762 1.00 87.06 O
ATOM 5 O5' G B 592 -3.701 134.382 89.917 1.00 85.17 O
ATOM 6 C5' G B 592 -2.748 135.002 90.815 1.00 80.03 C
ATOM 7 C4' G B 592 -1.872 133.950 91.474 1.00 76.54 C
ATOM 8 O4' G B 592 -1.095 133.238 90.468 1.00 75.37 O
ATOM 9 C3' G B 592 -0.854 134.487 92.481 1.00 75.20 C
ATOM 10 O3' G B 592 -0.594 133.527 93.505 1.00 74.94 O
ATOM 11 C2' G B 592 0.414 134.588 91.643 1.00 74.19 C
ATOM 12 O2' G B 592 1.588 134.542 92.433 1.00 73.26 O
ATOM 13 C1' G B 592 0.283 133.335 90.778 1.00 73.20 C
ATOM 14 N9 G B 592 1.049 133.348 89.533 1.00 70.63 N
ATOM 15 C8 G B 592 1.365 134.441 88.761 1.00 69.16 C
ATOM 16 N7 G B 592 2.069 134.136 87.705 1.00 68.26 N
ATOM 17 C5 G B 592 2.229 132.760 87.780 1.00 68.70 C
ATOM 18 C6 G B 592 2.908 131.864 86.910 1.00 67.64 C
ATOM 19 O6 G B 592 3.534 132.120 85.877 1.00 68.05 O
ATOM 20 N1 G B 592 2.812 130.551 87.352 1.00 66.64 N
ATOM 21 C2 G B 592 2.160 130.148 88.487 1.00 68.00 C
ATOM 22 N2 G B 592 2.185 128.833 88.738 1.00 68.07 N
ATOM 23 N3 G B 592 1.530 130.970 89.315 1.00 68.27 N
ATOM 24 C4 G B 592 1.603 132.254 88.900 1.00 69.08 C
ATOM 25 P C B 593 -1.810 132.861 94.316 1.00 73.52 P
ATOM 26 OP1 C B 593 -2.939 133.831 94.357 1.00 73.13 O
ATOM 27 OP2 C B 593 -1.254 132.326 95.591 1.00 71.15 O
ATOM 28 O5' C B 593 -2.235 131.636 93.385 1.00 68.63 O
TER
ATOM 2 P U A 536 4.401 139.207 91.331 1.00 57.66 P
ATOM 3 OP1 U A 536 3.950 140.593 91.047 1.00 55.95 O
ATOM 4 OP2 U A 536 3.515 138.285 92.093 1.00 56.88 O
ATOM 5 O5' U A 536 4.782 138.516 89.946 1.00 56.61 O
ATOM 6 C5' U A 536 5.782 139.098 89.097 1.00 55.81 C
ATOM 7 C4' U A 536 5.970 138.271 87.848 1.00 56.82 C
ATOM 8 O4' U A 536 6.406 136.934 88.222 1.00 55.60 O
ATOM 9 C3' U A 536 4.749 138.090 86.947 1.00 58.26 C
ATOM 10 O3' U A 536 5.180 138.038 85.585 1.00 62.26 O
ATOM 11 C2' U A 536 4.240 136.715 87.362 1.00 57.07 C
ATOM 12 O2' U A 536 3.499 136.064 86.349 1.00 57.20 O
ATOM 13 C1' U A 536 5.556 135.983 87.620 1.00 55.58 C
ATOM 14 N1 U A 536 5.434 134.813 88.504 1.00 54.28 N
ATOM 15 C2 U A 536 5.693 133.567 87.959 1.00 53.37 C
ATOM 16 O2 U A 536 6.073 133.407 86.815 1.00 53.69 O
ATOM 17 N3 U A 536 5.491 132.511 88.808 1.00 54.33 N
ATOM 18 C4 U A 536 5.072 132.568 90.119 1.00 54.90 C
ATOM 19 O4 U A 536 4.809 131.523 90.715 1.00 56.10 O
ATOM 20 C5 U A 536 4.868 133.890 90.620 1.00 54.54 C
ATOM 21 C6 U A 536 5.053 134.940 89.818 1.00 54.81 C
ATOM 22 P A A 537 4.702 139.169 84.540 1.00 66.20 P
ATOM 23 OP1 A A 537 5.769 139.306 83.510 1.00 65.49 O
ATOM 24 OP2 A A 537 4.263 140.372 85.307 1.00 65.29 O
ATOM 25 O5' A A 537 3.426 138.535 83.825 1.00 65.24 O
TER
ATOM 1 O3' A B 591 -5.647 134.213 88.298 1.00 86.11 O
ATOM 2 P G B 592 -5.018 135.158 89.447 1.00 87.40 P
ATOM 3 OP1 G B 592 -5.961 135.251 90.595 1.00 87.32 O
ATOM 4 OP2 G B 592 -4.575 136.401 88.762 1.00 87.06 O
ATOM 5 O5' G B 592 -3.701 134.382 89.917 1.00 85.17 O
ATOM 6 C5' G B 592 -2.748 135.002 90.815 1.00 80.03 C
ATOM 7 C4' G B 592 -1.872 133.950 91.474 1.00 76.54 C
ATOM 8 O4' G B 592 -1.095 133.238 90.468 1.00 75.37 O
ATOM 9 C3' G B 592 -0.854 134.487 92.481 1.00 75.20 C
ATOM 10 O3' G B 592 -0.594 133.527 93.505 1.00 74.94 O
ATOM 11 C2' G B 592 0.414 134.588 91.643 1.00 74.19 C
ATOM 12 O2' G B 592 1.588 134.542 92.433 1.00 73.26 O
ATOM 13 C1' G B 592 0.283 133.335 90.778 1.00 73.20 C
ATOM 14 N9 G B 592 1.049 133.348 89.533 1.00 70.63 N
ATOM 15 C8 G B 592 1.365 134.441 88.761 1.00 69.16 C
ATOM 16 N7 G B 592 2.069 134.136 87.705 1.00 68.26 N
ATOM 17 C5 G B 592 2.229 132.760 87.780 1.00 68.70 C
ATOM 18 C6 G B 592 2.908 131.864 86.910 1.00 67.64 C
ATOM 19 O6 G B 592 3.534 132.120 85.877 1.00 68.05 O
ATOM 20 N1 G B 592 2.812 130.551 87.352 1.00 66.64 N
ATOM 21 C2 G B 592 2.160 130.148 88.487 1.00 68.00 C
ATOM 22 N2 G B 592 2.185 128.833 88.738 1.00 68.07 N
ATOM 23 N3 G B 592 1.530 130.970 89.315 1.00 68.27 N
ATOM 24 C4 G B 592 1.603 132.254 88.900 1.00 69.08 C
ATOM 25 P C B 593 -1.810 132.861 94.316 1.00 73.52 P
ATOM 26 OP1 C B 593 -2.939 133.831 94.357 1.00 73.13 O
ATOM 27 OP2 C B 593 -1.254 132.326 95.591 1.00 71.15 O
ATOM 28 O5' C B 593 -2.235 131.636 93.385 1.00 68.63 O
TER
Atoms:
C4: (5.072,132.568,90.119)
N3: (5.491,132.511,88.808)
OP1: (3.950,140.593,91.047)
OP2: (3.515,138.285,92.093)
C2: (5.693,133.567,87.959)
C1': (5.556,135.983,87.620)
C3': (4.749,138.090,86.947)
O5': (4.782,138.516,89.946)
O4': (6.406,136.934,88.222)
C5': (5.782,139.098,89.097)
P: (4.401,139.207,91.331)
C4': (5.970,138.271,87.848)
C2': (4.240,136.715,87.362)
O2': (3.499,136.064,86.349)
N1: (5.434,134.813,88.504)
O4: (4.809,131.523,90.715)
O2: (6.073,133.407,86.815)
C6: (5.053,134.940,89.818)
C5: (4.868,133.890,90.620)
O3': (5.180,138.038,85.585)
N3: (5.491,132.511,88.808)
OP1: (3.950,140.593,91.047)
OP2: (3.515,138.285,92.093)
C2: (5.693,133.567,87.959)
C1': (5.556,135.983,87.620)
C3': (4.749,138.090,86.947)
O5': (4.782,138.516,89.946)
O4': (6.406,136.934,88.222)
C5': (5.782,139.098,89.097)
P: (4.401,139.207,91.331)
C4': (5.970,138.271,87.848)
C2': (4.240,136.715,87.362)
O2': (3.499,136.064,86.349)
N1: (5.434,134.813,88.504)
O4: (4.809,131.523,90.715)
O2: (6.073,133.407,86.815)
C6: (5.053,134.940,89.818)
C5: (4.868,133.890,90.620)
O3': (5.180,138.038,85.585)
OP1: (-5.961,135.251,90.595)
OP2: (-4.575,136.401,88.762)
C3': (-0.854,134.487,92.481)
C1': (0.283,133.335,90.778)
C5': (-2.748,135.002,90.815)
O6: (3.534,132.120,85.877)
O4': (-1.095,133.238,90.468)
C8: (1.365,134.441,88.761)
C2: (2.160,130.148,88.487)
C6: (2.908,131.864,86.910)
C5: (2.229,132.760,87.780)
C4: (1.603,132.254,88.900)
P: (-5.018,135.158,89.447)
C4': (-1.872,133.950,91.474)
C2': (0.414,134.588,91.643)
O2': (1.588,134.542,92.433)
N1: (2.812,130.551,87.352)
N2: (2.185,128.833,88.738)
N3: (1.530,130.970,89.315)
N7: (2.069,134.136,87.705)
N9: (1.049,133.348,89.533)
O5': (-3.701,134.382,89.917)
O3': (-0.594,133.527,93.505)
OP2: (-4.575,136.401,88.762)
C3': (-0.854,134.487,92.481)
C1': (0.283,133.335,90.778)
C5': (-2.748,135.002,90.815)
O6: (3.534,132.120,85.877)
O4': (-1.095,133.238,90.468)
C8: (1.365,134.441,88.761)
C2: (2.160,130.148,88.487)
C6: (2.908,131.864,86.910)
C5: (2.229,132.760,87.780)
C4: (1.603,132.254,88.900)
P: (-5.018,135.158,89.447)
C4': (-1.872,133.950,91.474)
C2': (0.414,134.588,91.643)
O2': (1.588,134.542,92.433)
N1: (2.812,130.551,87.352)
N2: (2.185,128.833,88.738)
N3: (1.530,130.970,89.315)
N7: (2.069,134.136,87.705)
N9: (1.049,133.348,89.533)
O5': (-3.701,134.382,89.917)
O3': (-0.594,133.527,93.505)
Image (generated by PyMOL):